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Sed0024047 (gene) of Chayote v1 genome

Gene IDSed0024047
OrganismSechium edule (Chayote v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC103494847
Genome locationLG13:2630562..2631629
RNA-Seq ExpressionSed0024047
SyntenySed0024047
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576890.1 hypothetical protein SDJN03_24464, partial [Cucurbita argyrosperma subsp. sororia]4.5e-5373.12Show/hide
Query:  AINLHLPLLHSEIHSFRFQSPPPPLAFSGSRPPRQIAYSRKKLSDADLASDLATEVAKIDANLVQREAAMKKSREFLFTELCGFLGLKSEETKRSWKKMD
        AINL  P +H +IH+F+FQS P P A S SR P QI Y RKK SDADLASDLA EVAKI+ NL+Q E AM KSRE LFTELCGFLGLKSEETKR WKKMD
Subjt:  AINLHLPLLHSEIHSFRFQSPPPPLAFSGSRPPRQIAYSRKKLSDADLASDLATEVAKIDANLVQREAAMKKSREFLFTELCGFLGLKSEETKRSWKKMD

Query:  EDAKLLLVEEFVSEWGFGFQPLSSRSVKEMVEEYV-DGEDLPPISSPPSLISSLKRTIGL
        E+AKL L++EFVSEWGF FQPLS RS KEMVEEYV +GE+ P ISS  SLISSLK++IGL
Subjt:  EDAKLLLVEEFVSEWGFGFQPLSSRSVKEMVEEYV-DGEDLPPISSPPSLISSLKRTIGL

KAG7014917.1 hypothetical protein SDJN02_22548, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-5372.39Show/hide
Query:  MISAINLHLPLLHSEIHSFRFQSPPPPLAFSGSRPPRQIAYSRKKLSDADLASDLATEVAKIDANLVQREAAMKKSREFLFTELCGFLGLKSEETKRSWK
        M+ AINL  P +H +IH+F+FQS P P A S SR P QI Y RKK SDADLASDLA EVAKI+ NL+Q E AM KSRE LFTELCGFLGLKSEETKR WK
Subjt:  MISAINLHLPLLHSEIHSFRFQSPPPPLAFSGSRPPRQIAYSRKKLSDADLASDLATEVAKIDANLVQREAAMKKSREFLFTELCGFLGLKSEETKRSWK

Query:  KMDEDAKLLLVEEFVSEWGFGFQPLSSRSVKEMVEEYV-DGEDLPPISSPPSLISSLKRTIGL
        KMDE+AKL L++EFVSEWGF FQPLS RS KEMVEEYV +GE+ P ISS  SLISSLK++IGL
Subjt:  KMDEDAKLLLVEEFVSEWGFGFQPLSSRSVKEMVEEYV-DGEDLPPISSPPSLISSLKRTIGL

XP_022149245.1 uncharacterized protein LOC111017712 [Momordica charantia]3.4e-5675.46Show/hide
Query:  MISAINL-HLPLLHSEIHSFRFQSPPPPLAFSGSRPPRQIAYSRKKLSDADLASDLATEVAKIDANLVQREAAMKKSREFLFTELCGFLGLKSEETKRSW
        MI AINL  LP   SEIHSFRFQSPP P A S +R P QI+Y  KKLSDA+LASDLATEVAK+  NL+QRE AMKKS+EFLFTELCGFLGLKSEETK+SW
Subjt:  MISAINL-HLPLLHSEIHSFRFQSPPPPLAFSGSRPPRQIAYSRKKLSDADLASDLATEVAKIDANLVQREAAMKKSREFLFTELCGFLGLKSEETKRSW

Query:  KKMDEDAKLLLVEEFVSEWGFGFQPLSSRSVKEMVEEYVDGEDLPPISSPPSLISSLKRTIGL
        KKMDE+AKL LV+EFV+EWGF FQPLS RSVKE+VEEYV+GE++  ISS PSLI SLKR +GL
Subjt:  KKMDEDAKLLLVEEFVSEWGFGFQPLSSRSVKEMVEEYVDGEDLPPISSPPSLISSLKRTIGL

XP_022922671.1 uncharacterized protein LOC111430603 [Cucurbita moschata]2.0e-5372.39Show/hide
Query:  MISAINLHLPLLHSEIHSFRFQSPPPPLAFSGSRPPRQIAYSRKKLSDADLASDLATEVAKIDANLVQREAAMKKSREFLFTELCGFLGLKSEETKRSWK
        M+ AINL  P +H +IH+F+FQS P P A S SR P QI Y RKK SDADLASDLA EVAKI+ NL+Q E AM KSRE LFTELCGFLGLKSEETKR WK
Subjt:  MISAINLHLPLLHSEIHSFRFQSPPPPLAFSGSRPPRQIAYSRKKLSDADLASDLATEVAKIDANLVQREAAMKKSREFLFTELCGFLGLKSEETKRSWK

Query:  KMDEDAKLLLVEEFVSEWGFGFQPLSSRSVKEMVEEYV-DGEDLPPISSPPSLISSLKRTIGL
        KMDE+AKL L++EFVSEWGF FQPLS RS KEMVEEYV +GE+ P ISS  SLISSLK++IGL
Subjt:  KMDEDAKLLLVEEFVSEWGFGFQPLSSRSVKEMVEEYV-DGEDLPPISSPPSLISSLKRTIGL

XP_023551996.1 uncharacterized protein LOC111809798 [Cucurbita pepo subsp. pepo]1.2e-5373.01Show/hide
Query:  MISAINLHLPLLHSEIHSFRFQSPPPPLAFSGSRPPRQIAYSRKKLSDADLASDLATEVAKIDANLVQREAAMKKSREFLFTELCGFLGLKSEETKRSWK
        M+ AINL  P +H +IH+F+FQS P P A S SR P QI Y RKK SDADLASDLA EVAKI+ NL+Q E AM KSRE LFTELCGFLGLKSEETKR WK
Subjt:  MISAINLHLPLLHSEIHSFRFQSPPPPLAFSGSRPPRQIAYSRKKLSDADLASDLATEVAKIDANLVQREAAMKKSREFLFTELCGFLGLKSEETKRSWK

Query:  KMDEDAKLLLVEEFVSEWGFGFQPLSSRSVKEMVEEYV-DGEDLPPISSPPSLISSLKRTIGL
        KMDE+AKL LV+EFVSEWGF FQPLS RS KEMVEEYV +GE+ P ISS  SLISSLK+T+GL
Subjt:  KMDEDAKLLLVEEFVSEWGFGFQPLSSRSVKEMVEEYV-DGEDLPPISSPPSLISSLKRTIGL

TrEMBL top hitse value%identityAlignment
A0A0A0KYF6 Uncharacterized protein5.2e-5575.31Show/hide
Query:  MISAINLHLPLLHSEIHSFRFQSPPPPLAFSGSRPPRQIAYSRKKLSDADLASDLATEVAKIDANLVQREAAMKKSREFLFTELCGFLGLKSEETKRSWK
        MISAINL LP     IHSFRFQ  P P   S +R PRQI Y RKKLSDADLASDLATEVAKI+ NL+QRE AMKKSREFLFTELC FLGLKSEETKR W 
Subjt:  MISAINLHLPLLHSEIHSFRFQSPPPPLAFSGSRPPRQIAYSRKKLSDADLASDLATEVAKIDANLVQREAAMKKSREFLFTELCGFLGLKSEETKRSWK

Query:  KMDEDAKLLLVEEFVSEWGFGFQPLSSRSVKEMVEEYVDGEDLPPISSPPSLISSLKRTIGL
        KM+E+AKL LV+EFVSEWGF FQPLS R VKEMVEEYV+GE+L  ISS  S ISSLK+T+GL
Subjt:  KMDEDAKLLLVEEFVSEWGFGFQPLSSRSVKEMVEEYVDGEDLPPISSPPSLISSLKRTIGL

A0A1S3BZE3 LOW QUALITY PROTEIN: uncharacterized protein LOC1034948478.7e-5070.99Show/hide
Query:  MISAINLHLPLLHSEIHSFRFQSPPPPLAFSGSRPPRQIAYSRKKLSDADLASDLATEVAKIDANLVQREAAMKKSREFLFTELCGFLGLKSEETKRSWK
        MISAINL  P    EIH+FRFQ  P P  F  +R PRQI Y RKKLSDADLA DLATEVAKI+ NL+QRE AMKKSR F++  +  FLGLKSEETKR WK
Subjt:  MISAINLHLPLLHSEIHSFRFQSPPPPLAFSGSRPPRQIAYSRKKLSDADLASDLATEVAKIDANLVQREAAMKKSREFLFTELCGFLGLKSEETKRSWK

Query:  KMDEDAKLLLVEEFVSEWGFGFQPLSSRSVKEMVEEYVDGEDLPPISSPPSLISSLKRTIGL
        KM+E+AKL LV+EFVSEWGF FQPLS R VKEMVEEYV+GE+L  ISS  SLISSLK+T+GL
Subjt:  KMDEDAKLLLVEEFVSEWGFGFQPLSSRSVKEMVEEYVDGEDLPPISSPPSLISSLKRTIGL

A0A6J1D577 uncharacterized protein LOC1110177121.6e-5675.46Show/hide
Query:  MISAINL-HLPLLHSEIHSFRFQSPPPPLAFSGSRPPRQIAYSRKKLSDADLASDLATEVAKIDANLVQREAAMKKSREFLFTELCGFLGLKSEETKRSW
        MI AINL  LP   SEIHSFRFQSPP P A S +R P QI+Y  KKLSDA+LASDLATEVAK+  NL+QRE AMKKS+EFLFTELCGFLGLKSEETK+SW
Subjt:  MISAINL-HLPLLHSEIHSFRFQSPPPPLAFSGSRPPRQIAYSRKKLSDADLASDLATEVAKIDANLVQREAAMKKSREFLFTELCGFLGLKSEETKRSW

Query:  KKMDEDAKLLLVEEFVSEWGFGFQPLSSRSVKEMVEEYVDGEDLPPISSPPSLISSLKRTIGL
        KKMDE+AKL LV+EFV+EWGF FQPLS RSVKE+VEEYV+GE++  ISS PSLI SLKR +GL
Subjt:  KKMDEDAKLLLVEEFVSEWGFGFQPLSSRSVKEMVEEYVDGEDLPPISSPPSLISSLKRTIGL

A0A6J1E4R4 uncharacterized protein LOC1114306039.9e-5472.39Show/hide
Query:  MISAINLHLPLLHSEIHSFRFQSPPPPLAFSGSRPPRQIAYSRKKLSDADLASDLATEVAKIDANLVQREAAMKKSREFLFTELCGFLGLKSEETKRSWK
        M+ AINL  P +H +IH+F+FQS P P A S SR P QI Y RKK SDADLASDLA EVAKI+ NL+Q E AM KSRE LFTELCGFLGLKSEETKR WK
Subjt:  MISAINLHLPLLHSEIHSFRFQSPPPPLAFSGSRPPRQIAYSRKKLSDADLASDLATEVAKIDANLVQREAAMKKSREFLFTELCGFLGLKSEETKRSWK

Query:  KMDEDAKLLLVEEFVSEWGFGFQPLSSRSVKEMVEEYV-DGEDLPPISSPPSLISSLKRTIGL
        KMDE+AKL L++EFVSEWGF FQPLS RS KEMVEEYV +GE+ P ISS  SLISSLK++IGL
Subjt:  KMDEDAKLLLVEEFVSEWGFGFQPLSSRSVKEMVEEYV-DGEDLPPISSPPSLISSLKRTIGL

A0A6J1J388 uncharacterized protein LOC1114829941.9e-5272.39Show/hide
Query:  MISAINLHLPLLHSEIHSFRFQSPPPPLAFSGSRPPRQIAYSRKKLSDADLASDLATEVAKIDANLVQREAAMKKSREFLFTELCGFLGLKSEETKRSWK
        MI AINL  P +H +IH+F+FQS P   A S SR P QI Y RKK SDADLASDLA EVAKI+ NL+Q E AM KSRE LFT+LCGFL LKSEETKR WK
Subjt:  MISAINLHLPLLHSEIHSFRFQSPPPPLAFSGSRPPRQIAYSRKKLSDADLASDLATEVAKIDANLVQREAAMKKSREFLFTELCGFLGLKSEETKRSWK

Query:  KMDEDAKLLLVEEFVSEWGFGFQPLSSRSVKEMVEEYV-DGEDLPPISSPPSLISSLKRTIGL
        KMDE+AKL LV+EFVSEWGF FQPLS RSVKEMVEEYV +GE+ P ISS  SLISSLK++IGL
Subjt:  KMDEDAKLLLVEEFVSEWGFGFQPLSSRSVKEMVEEYV-DGEDLPPISSPPSLISSLKRTIGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G64480.1 unknown protein2.9e-2142.96Show/hide
Query:  RPPRQIAYSRKKLSDADLASDLATEVAKIDANLVQREAAMKKSREFLFTELCGFLGLKSEETKRSWKKMDEDAKLLLVEEFVSEWGFGFQPLSSRSVKEM
        RP R+    +K ++D++LA+DLA E+ K +    QR  AMKKS E L+ E C  + LK +E K  W K+ E+ KL+LV EFV EW   FQPLS  SVKEM
Subjt:  RPPRQIAYSRKKLSDADLASDLATEVAKIDANLVQREAAMKKSREFLFTELCGFLGLKSEETKRSWKKMDEDAKLLLVEEFVSEWGFGFQPLSSRSVKEM

Query:  VEE-------YVDGEDLPPISSPPSLISSLKRTIG
        V++        ++      +SS   L   LKR IG
Subjt:  VEE-------YVDGEDLPPISSPPSLISSLKRTIG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTCCGCAATCAATCTTCATCTTCCTCTCCTCCACAGCGAGATCCACAGCTTCCGATTCCAATCTCCGCCGCCGCCGCTGGCCTTTTCCGGCAGCCGACCGCCGCG
CCAAATCGCCTACAGCAGAAAGAAACTCAGCGACGCGGATCTGGCCTCCGATCTCGCAACGGAAGTGGCGAAGATCGACGCCAATTTGGTGCAGAGAGAGGCGGCGATGA
AGAAGAGCAGAGAGTTTCTGTTCACGGAGCTCTGCGGATTTCTAGGGCTGAAATCGGAGGAGACGAAGAGGAGTTGGAAGAAGATGGATGAAGATGCGAAGTTGTTACTG
GTTGAAGAGTTTGTTTCTGAGTGGGGATTCGGTTTTCAGCCATTGTCGTCCAGATCTGTGAAGGAGATGGTGGAGGAATATGTTGATGGTGAAGATCTGCCGCCGATTTC
TTCTCCTCCGTCGTTGATTTCTTCGTTGAAGAGAACGATTGGATTGTGA
mRNA sequenceShow/hide mRNA sequence
GAATTTTGTTTTTAATTTTTTTAGTAGGATTTTTTTCTTTTGAATTGATTGACTAGAAAAACATTGTTTTTTTAGGCGTAGTTTAAGGCAGGGAAATGATATTTTAAGAA
AGTATTTATTAAAAAATAAAAATTTAGAAAATGGAAGAGATATTCTGAAAATCGAAAACGATTTCCAAAACCCAATTCTCGTGGCTCGTTTCCTGCAACAAAATCATTCA
ATCGAAGCGTCCACAAGGAAAAATCTCTTCAAATGATCTCCGCAATCAATCTTCATCTTCCTCTCCTCCACAGCGAGATCCACAGCTTCCGATTCCAATCTCCGCCGCCG
CCGCTGGCCTTTTCCGGCAGCCGACCGCCGCGCCAAATCGCCTACAGCAGAAAGAAACTCAGCGACGCGGATCTGGCCTCCGATCTCGCAACGGAAGTGGCGAAGATCGA
CGCCAATTTGGTGCAGAGAGAGGCGGCGATGAAGAAGAGCAGAGAGTTTCTGTTCACGGAGCTCTGCGGATTTCTAGGGCTGAAATCGGAGGAGACGAAGAGGAGTTGGA
AGAAGATGGATGAAGATGCGAAGTTGTTACTGGTTGAAGAGTTTGTTTCTGAGTGGGGATTCGGTTTTCAGCCATTGTCGTCCAGATCTGTGAAGGAGATGGTGGAGGAA
TATGTTGATGGTGAAGATCTGCCGCCGATTTCTTCTCCTCCGTCGTTGATTTCTTCGTTGAAGAGAACGATTGGATTGTGATACACAAAAGAAATTTTGCATTTGGATCG
TTGATTTCTGAACTCCATGTAAGGTATTATCAGCATTTTATTTTTGGATTAGGGTTTCAATTCTCAGATTTGGTGGAATGTATTTCTGTTTTTGTTTTTCAATTATTTTT
TTGGTTTTTTTGCTGGAGCTAGGTTTATTTCAAGAAACCCTAGATTTATTATTGGTTTTTTTTTTTTATTTAAGAACATTTCTGGTGGGGGATGGAATGTATAGTATGTT
TAATTGGCTGATAAACATTCTACCAAATAATTGTATATTTGAGTCATGGAAAAGTCCATGTTATTGAATTACATAAAC
Protein sequenceShow/hide protein sequence
MISAINLHLPLLHSEIHSFRFQSPPPPLAFSGSRPPRQIAYSRKKLSDADLASDLATEVAKIDANLVQREAAMKKSREFLFTELCGFLGLKSEETKRSWKKMDEDAKLLL
VEEFVSEWGFGFQPLSSRSVKEMVEEYVDGEDLPPISSPPSLISSLKRTIGL