CuGenDBv2

Gene ID	Sed0024079
Organism	Sechium edule (Chayote v1)
Description	tRNA_int_end_N2 domain-containing protein
Genome location	LG02:46077346..46082283
RNA-Seq Expression	Sed0024079
Synteny	Sed0024079
Gene Ontology terms	GO:0000379 - tRNA-type intron splice site recognition and cleavage (biological process) GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process) GO:0000214 - tRNA-intron endonuclease complex (cellular component) GO:0004519 - endonuclease activity (molecular function)
InterPro domains	IPR024336 - tRNA-splicing endonuclease, subunit Sen54, N-terminal IPR024337 - tRNA-splicing endonuclease, subunit Sen54

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6596967.1 Chromatin assembly factor 1 subunit FAS1, partial [Cucurbita argyrosperma subsp. sororia]

1.8e-128

86.04

Show/hide

Query:  MEATDWESSSGGASGDD---EQDVIDEEECLCSSGNMRKLQFRKHASTARWNDDMEMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH
        MEATDWE SSGGAS DD   EQD+ +EEECLCSSGNMRKLQFRKHASTARWND+M MAEVLENKGSLWTT+GIVRCGKIYCSIEETLFLIEVGALHLLDH
Subjt:  MEATDWESSSGGASGDD---EQDVIDEEECLCSSGNMRKLQFRKHASTARWNDDMEMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH

Query:  GNSILSLKDVYNKVAEGKSGCIWEQFEVYRHLKSLGFIVGKHKVPWSVKGLRNGSDISPRSSIENEGATDLQSKDERSISELLDAIQLNELTPIFDVFLP
         NS LSLKDVY KVAEGKS CIWEQFEVYRHLKSLG+IVGKHKVPWSVKG RNG DIS +SSIEN+G+TD  S+DE+SI EL+DAIQLNE+TPIFDV+LP
Subjt:  GNSILSLKDVYNKVAEGKSGCIWEQFEVYRHLKSLGFIVGKHKVPWSVKGLRNGSDISPRSSIENEGATDLQSKDERSISELLDAIQLNELTPIFDVFLP

Query:  HSKFRKSSPGDPNFMVYLTRGYPPPKKDIEVIESICRGIPVKYCHVEHGRVCFFSFDKVELPVLP
        HSKFRKSSPGDPNFMV LTRGYPPPK DIEVIE    GIP+KYCHVEHGRVCFFSFDKVELPVLP
Subjt:  HSKFRKSSPGDPNFMVYLTRGYPPPKKDIEVIESICRGIPVKYCHVEHGRVCFFSFDKVELPVLP

KAG7028441.1 tRNA-splicing endonuclease subunit Sen54 [Cucurbita argyrosperma subsp. argyrosperma]

1.8e-128

86.04

Show/hide

Query:  MEATDWESSSGGASGDD---EQDVIDEEECLCSSGNMRKLQFRKHASTARWNDDMEMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH
        MEATDWE SSGGAS DD   EQD+ +EEECLCSSGNMRKLQFRKHASTARWND+M MAEVLENKGSLWTT+GIVRCGKIYCSIEETLFLIEVGALHLLDH
Subjt:  MEATDWESSSGGASGDD---EQDVIDEEECLCSSGNMRKLQFRKHASTARWNDDMEMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH

Query:  GNSILSLKDVYNKVAEGKSGCIWEQFEVYRHLKSLGFIVGKHKVPWSVKGLRNGSDISPRSSIENEGATDLQSKDERSISELLDAIQLNELTPIFDVFLP
         NS LSLKDVY KVAEGKS CIWEQFEVYRHLKSLG+IVGKHKVPWSVKG RNG DIS +SSIEN+G+TD  S+DE+SI EL+DAIQLNE+TPIFDV+LP
Subjt:  GNSILSLKDVYNKVAEGKSGCIWEQFEVYRHLKSLGFIVGKHKVPWSVKGLRNGSDISPRSSIENEGATDLQSKDERSISELLDAIQLNELTPIFDVFLP

Query:  HSKFRKSSPGDPNFMVYLTRGYPPPKKDIEVIESICRGIPVKYCHVEHGRVCFFSFDKVELPVLP
        HSKFRKSSPGDPNFMV LTRGYPPPK DIEVIE    GIP+KYCHVEHGRVCFFSFDKVELPVLP
Subjt:  HSKFRKSSPGDPNFMVYLTRGYPPPKKDIEVIESICRGIPVKYCHVEHGRVCFFSFDKVELPVLP

XP_022156818.1 uncharacterized protein LOC111023660 [Momordica charantia]

1.4e-131

87.17

Show/hide

Query:  MEATDWESSSGGASGDD---EQDVIDEEECLCSSGNMRKLQFRKHASTARWNDDMEMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH
        MEATDWESSSGGASGDD   EQDV DEEECLC+SGNMRKLQFRKHASTARWND M MAEVLEN+GSLWTTTGIVRCGKIYCS EETLFL+EVGALHLLDH
Subjt:  MEATDWESSSGGASGDD---EQDVIDEEECLCSSGNMRKLQFRKHASTARWNDDMEMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH

Query:  GNSILSLKDVYNKVAEGKSGCIWEQFEVYRHLKSLGFIVGKHKVPWSVKGLRNGSDISPRSSIENEGATDLQSKDERSISELLDAIQLNELTPIFDVFLP
         NS LSLKDVY KVAEGK+GC+WEQFEVYRHLKSLGFIVGKHKVPWSVKG+RNGSDISP+SSIENEGA DL+SKDERSISELL +IQL+++ PIFDVFLP
Subjt:  GNSILSLKDVYNKVAEGKSGCIWEQFEVYRHLKSLGFIVGKHKVPWSVKGLRNGSDISPRSSIENEGATDLQSKDERSISELLDAIQLNELTPIFDVFLP

Query:  HSKFRKSSPGDPNFMVYLTRGYPPPKKDIEVIESICRGIPVKYCHVEHGRVCFFSFDKVELPVLP
        HSKFRKSSPGDPNFMV LTRGYPPPKKDIE +E   RGI +KYCHVEHGRVCFFSFDK+ELPVLP
Subjt:  HSKFRKSSPGDPNFMVYLTRGYPPPKKDIEVIESICRGIPVKYCHVEHGRVCFFSFDKVELPVLP

XP_022940787.1 tRNA-splicing endonuclease subunit Sen54 [Cucurbita moschata]

4.1e-128

85.66

Show/hide

Query:  MEATDWESSSGGASGDD---EQDVIDEEECLCSSGNMRKLQFRKHASTARWNDDMEMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH
        MEATDWE SSGGAS DD   EQD+ +EEECLCSSGNMRKLQFRKHASTARWND+M MAEVLENKGSLWTT+GIVRCGKIYCSIEETLFLIEVGALHLLDH
Subjt:  MEATDWESSSGGASGDD---EQDVIDEEECLCSSGNMRKLQFRKHASTARWNDDMEMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH

Query:  GNSILSLKDVYNKVAEGKSGCIWEQFEVYRHLKSLGFIVGKHKVPWSVKGLRNGSDISPRSSIENEGATDLQSKDERSISELLDAIQLNELTPIFDVFLP
         NS LSLKDVY KVAEGKS CIWEQFEVYRHLKSLG+IVGKHKVPWSVKG +NG DIS +SSIEN+G+TD  S+DE+SI EL+DAIQLNE+TPIFDV+LP
Subjt:  GNSILSLKDVYNKVAEGKSGCIWEQFEVYRHLKSLGFIVGKHKVPWSVKGLRNGSDISPRSSIENEGATDLQSKDERSISELLDAIQLNELTPIFDVFLP

Query:  HSKFRKSSPGDPNFMVYLTRGYPPPKKDIEVIESICRGIPVKYCHVEHGRVCFFSFDKVELPVLP
        HSKFRKSSPGDPNFMV LTRGYPPPK DIEVIE    GIP+KYCHVEHGRVCFFSFDKVELPVLP
Subjt:  HSKFRKSSPGDPNFMVYLTRGYPPPKKDIEVIESICRGIPVKYCHVEHGRVCFFSFDKVELPVLP

XP_023538818.1 tRNA-splicing endonuclease subunit Sen54-like [Cucurbita pepo subsp. pepo]

6.3e-129

86.42

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Query:  MEATDWESSSGGASGDD---EQDVIDEEECLCSSGNMRKLQFRKHASTARWNDDMEMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH
        MEATDWE SSGGAS DD   EQD+ +EEECLCSSGNMRKLQFRKHASTARWND+M MAEVLENKGSLWTT+GIVRCGKIYCSIEETLFLIEVGALHLLDH
Subjt:  MEATDWESSSGGASGDD---EQDVIDEEECLCSSGNMRKLQFRKHASTARWNDDMEMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH

Query:  GNSILSLKDVYNKVAEGKSGCIWEQFEVYRHLKSLGFIVGKHKVPWSVKGLRNGSDISPRSSIENEGATDLQSKDERSISELLDAIQLNELTPIFDVFLP
         NS LSLKDVY KVAEGKS CIWEQFEVYRHLKSLG+IVGKHKVPWSVKG RNG DIS RSSIEN+G+TD  S+DE+SI EL+DAIQLNE+TPIFDV+LP
Subjt:  GNSILSLKDVYNKVAEGKSGCIWEQFEVYRHLKSLGFIVGKHKVPWSVKGLRNGSDISPRSSIENEGATDLQSKDERSISELLDAIQLNELTPIFDVFLP

Query:  HSKFRKSSPGDPNFMVYLTRGYPPPKKDIEVIESICRGIPVKYCHVEHGRVCFFSFDKVELPVLP
        HSKFRKSSPGDPNFMV LTRGYPPPK DIEVIE    GIP+KYCHVEHGRVCFFSFDKVELPVLP
Subjt:  HSKFRKSSPGDPNFMVYLTRGYPPPKKDIEVIESICRGIPVKYCHVEHGRVCFFSFDKVELPVLP

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DRN3 uncharacterized protein LOC111023660

6.6e-132

87.17

Show/hide

Query:  MEATDWESSSGGASGDD---EQDVIDEEECLCSSGNMRKLQFRKHASTARWNDDMEMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH
        MEATDWESSSGGASGDD   EQDV DEEECLC+SGNMRKLQFRKHASTARWND M MAEVLEN+GSLWTTTGIVRCGKIYCS EETLFL+EVGALHLLDH
Subjt:  MEATDWESSSGGASGDD---EQDVIDEEECLCSSGNMRKLQFRKHASTARWNDDMEMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH

Query:  GNSILSLKDVYNKVAEGKSGCIWEQFEVYRHLKSLGFIVGKHKVPWSVKGLRNGSDISPRSSIENEGATDLQSKDERSISELLDAIQLNELTPIFDVFLP
         NS LSLKDVY KVAEGK+GC+WEQFEVYRHLKSLGFIVGKHKVPWSVKG+RNGSDISP+SSIENEGA DL+SKDERSISELL +IQL+++ PIFDVFLP
Subjt:  GNSILSLKDVYNKVAEGKSGCIWEQFEVYRHLKSLGFIVGKHKVPWSVKGLRNGSDISPRSSIENEGATDLQSKDERSISELLDAIQLNELTPIFDVFLP

Query:  HSKFRKSSPGDPNFMVYLTRGYPPPKKDIEVIESICRGIPVKYCHVEHGRVCFFSFDKVELPVLP
        HSKFRKSSPGDPNFMV LTRGYPPPKKDIE +E   RGI +KYCHVEHGRVCFFSFDK+ELPVLP
Subjt:  HSKFRKSSPGDPNFMVYLTRGYPPPKKDIEVIESICRGIPVKYCHVEHGRVCFFSFDKVELPVLP

A0A6J1FKK4 tRNA-splicing endonuclease subunit Sen54

2.0e-128

85.66

Show/hide

Query:  MEATDWESSSGGASGDD---EQDVIDEEECLCSSGNMRKLQFRKHASTARWNDDMEMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH
        MEATDWE SSGGAS DD   EQD+ +EEECLCSSGNMRKLQFRKHASTARWND+M MAEVLENKGSLWTT+GIVRCGKIYCSIEETLFLIEVGALHLLDH
Subjt:  MEATDWESSSGGASGDD---EQDVIDEEECLCSSGNMRKLQFRKHASTARWNDDMEMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH

Query:  GNSILSLKDVYNKVAEGKSGCIWEQFEVYRHLKSLGFIVGKHKVPWSVKGLRNGSDISPRSSIENEGATDLQSKDERSISELLDAIQLNELTPIFDVFLP
         NS LSLKDVY KVAEGKS CIWEQFEVYRHLKSLG+IVGKHKVPWSVKG +NG DIS +SSIEN+G+TD  S+DE+SI EL+DAIQLNE+TPIFDV+LP
Subjt:  GNSILSLKDVYNKVAEGKSGCIWEQFEVYRHLKSLGFIVGKHKVPWSVKGLRNGSDISPRSSIENEGATDLQSKDERSISELLDAIQLNELTPIFDVFLP

Query:  HSKFRKSSPGDPNFMVYLTRGYPPPKKDIEVIESICRGIPVKYCHVEHGRVCFFSFDKVELPVLP
        HSKFRKSSPGDPNFMV LTRGYPPPK DIEVIE    GIP+KYCHVEHGRVCFFSFDKVELPVLP
Subjt:  HSKFRKSSPGDPNFMVYLTRGYPPPKKDIEVIESICRGIPVKYCHVEHGRVCFFSFDKVELPVLP

A0A6J1I794 tRNA-splicing endonuclease subunit Sen54 isoform X1

9.8e-128

85.66

Show/hide

Query:  MEATDWESSSGGASGDD---EQDVIDEEECLCSSGNMRKLQFRKHASTARWNDDMEMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH
        MEATDWE SSGGAS DD   EQD+ +EEECL SSGNMRKLQFRKHASTARWND+M MAEVLENKGSLWTT+GIVRCGKIYCSIEETLFLIEVGALHLLDH
Subjt:  MEATDWESSSGGASGDD---EQDVIDEEECLCSSGNMRKLQFRKHASTARWNDDMEMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH

Query:  GNSILSLKDVYNKVAEGKSGCIWEQFEVYRHLKSLGFIVGKHKVPWSVKGLRNGSDISPRSSIENEGATDLQSKDERSISELLDAIQLNELTPIFDVFLP
         NS LSLKDVY KVAEGKS CIWEQFEVYRHLKSLG+IVGKHKVPWSVKG RNG DIS RSSIEN+G+TD +S+DE+SI ELL+A+QLNELTPIFDV+LP
Subjt:  GNSILSLKDVYNKVAEGKSGCIWEQFEVYRHLKSLGFIVGKHKVPWSVKGLRNGSDISPRSSIENEGATDLQSKDERSISELLDAIQLNELTPIFDVFLP

Query:  HSKFRKSSPGDPNFMVYLTRGYPPPKKDIEVIESICRGIPVKYCHVEHGRVCFFSFDKVELPVLP
        HSKFRKSSPGDPNFMV LTRGYPPPK DIEVIE    GIP+KYCHVEHGRVCFFSFDKV+LPVLP
Subjt:  HSKFRKSSPGDPNFMVYLTRGYPPPKKDIEVIESICRGIPVKYCHVEHGRVCFFSFDKVELPVLP

A0A6J1I8D9 tRNA-splicing endonuclease subunit Sen54 isoform X3

9.8e-128

85.66

Show/hide

Query:  MEATDWESSSGGASGDD---EQDVIDEEECLCSSGNMRKLQFRKHASTARWNDDMEMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH
        MEATDWE SSGGAS DD   EQD+ +EEECL SSGNMRKLQFRKHASTARWND+M MAEVLENKGSLWTT+GIVRCGKIYCSIEETLFLIEVGALHLLDH
Subjt:  MEATDWESSSGGASGDD---EQDVIDEEECLCSSGNMRKLQFRKHASTARWNDDMEMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH

Query:  GNSILSLKDVYNKVAEGKSGCIWEQFEVYRHLKSLGFIVGKHKVPWSVKGLRNGSDISPRSSIENEGATDLQSKDERSISELLDAIQLNELTPIFDVFLP
         NS LSLKDVY KVAEGKS CIWEQFEVYRHLKSLG+IVGKHKVPWSVKG RNG DIS RSSIEN+G+TD +S+DE+SI ELL+A+QLNELTPIFDV+LP
Subjt:  GNSILSLKDVYNKVAEGKSGCIWEQFEVYRHLKSLGFIVGKHKVPWSVKGLRNGSDISPRSSIENEGATDLQSKDERSISELLDAIQLNELTPIFDVFLP

Query:  HSKFRKSSPGDPNFMVYLTRGYPPPKKDIEVIESICRGIPVKYCHVEHGRVCFFSFDKVELPVLP
        HSKFRKSSPGDPNFMV LTRGYPPPK DIEVIE    GIP+KYCHVEHGRVCFFSFDKV+LPVLP
Subjt:  HSKFRKSSPGDPNFMVYLTRGYPPPKKDIEVIESICRGIPVKYCHVEHGRVCFFSFDKVELPVLP

A0A6J1ICR8 tRNA-splicing endonuclease subunit Sen54 isoform X2

9.8e-128

85.66

Show/hide

Query:  MEATDWESSSGGASGDD---EQDVIDEEECLCSSGNMRKLQFRKHASTARWNDDMEMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH
        MEATDWE SSGGAS DD   EQD+ +EEECL SSGNMRKLQFRKHASTARWND+M MAEVLENKGSLWTT+GIVRCGKIYCSIEETLFLIEVGALHLLDH
Subjt:  MEATDWESSSGGASGDD---EQDVIDEEECLCSSGNMRKLQFRKHASTARWNDDMEMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH

Query:  GNSILSLKDVYNKVAEGKSGCIWEQFEVYRHLKSLGFIVGKHKVPWSVKGLRNGSDISPRSSIENEGATDLQSKDERSISELLDAIQLNELTPIFDVFLP
         NS LSLKDVY KVAEGKS CIWEQFEVYRHLKSLG+IVGKHKVPWSVKG RNG DIS RSSIEN+G+TD +S+DE+SI ELL+A+QLNELTPIFDV+LP
Subjt:  GNSILSLKDVYNKVAEGKSGCIWEQFEVYRHLKSLGFIVGKHKVPWSVKGLRNGSDISPRSSIENEGATDLQSKDERSISELLDAIQLNELTPIFDVFLP

Query:  HSKFRKSSPGDPNFMVYLTRGYPPPKKDIEVIESICRGIPVKYCHVEHGRVCFFSFDKVELPVLP
        HSKFRKSSPGDPNFMV LTRGYPPPK DIEVIE    GIP+KYCHVEHGRVCFFSFDKV+LPVLP
Subjt:  HSKFRKSSPGDPNFMVYLTRGYPPPKKDIEVIESICRGIPVKYCHVEHGRVCFFSFDKVELPVLP

SwissProt top hits

e value

%identity

Alignment

O74908 Probable tRNA-splicing endonuclease subunit sen54

8.6e-04

31.43

Show/hide

Query:  NMRKLQFRKHASTARWNDDMEMAEVLENKGSLWTTTGIVRC-GKIYCSIEETLFLIEVGALHLLDHGNSILSLKDVYNKVAEGKSGCIWEQFEVYRHLKS
        ++ +L   KHA  A WN    M+ V +  G L+ T G      +++   EETL+L+E G++         +SL+ VY+  +    G + E + VY HL+ 
Subjt:  NMRKLQFRKHASTARWNDDMEMAEVLENKGSLWTTTGIVRC-GKIYCSIEETLFLIEVGALHLLDHGNSILSLKDVYNKVAEGKSGCIWEQFEVYRHLKS

Query:  LGFIV
         GF V
Subjt:  LGFIV

Q74ZJ5 tRNA-splicing endonuclease subunit SEN54

7.8e-05

30.39

Show/hide

Query:  ARWNDDMEMAEVLENKGSLWTTTGIV-RCGKIYCSIEETLFLIEVGAL----------HLLDHGNSILSLKDVYNKVAEGKSGCIWEQFEVYRHLKSLGF
        A W ++  MA +   +GS   T G V + G+ +  + E ++L+E G +             +H + +LS++DVY   +  +     ++F VY HLK LGF
Subjt:  ARWNDDMEMAEVLENKGSLWTTTGIV-RCGKIYCSIEETLFLIEVGAL----------HLLDHGNSILSLKDVYNKVAEGKSGCIWEQFEVYRHLKSLGF

Query:  IV
        IV
Subjt:  IV

Arabidopsis top hits

e value

%identity

Alignment

AT3G02370.1 unknown protein

2.0e-40

49.38

Show/hide

Query:  MAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLL-DHGNSILSLKDVYNKVAEGKSGCIWEQFEVYRHLKSLGFIVGKHKVPWSVKGLRNGS
        MAEV   +G LWTTTGI+R GK YC IEE L+L E+G L LL D  + ++SLKD+Y ++AEGK GC WE +EVYR+LK LG+I+G+H VPW+ K   N  
Subjt:  MAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLL-DHGNSILSLKDVYNKVAEGKSGCIWEQFEVYRHLKSLGFIVGKHKVPWSVKGLRNGS

Query:  DISPRSSIENEGATDLQSKDERSISELLDAIQLNELTPIFDVFLPHSKFRKSSPGDPNFM
          +P    E+  A +   +D  S+++LL  + + +  P+FDV+LP+S+F+KSSPG+P+F+
Subjt:  DISPRSSIENEGATDLQSKDERSISELLDAIQLNELTPIFDVFLPHSKFRKSSPGDPNFM

AT3G02370.2 unknown protein

7.4e-43

47.43

Show/hide

Query:  MAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLL-DHGNSILSLKDVYNKVAEGKSGCIWEQFEVYRHLKSLGFIVGKHKVPWSVKGLRNGS
        MAEV   +G LWTTTGI+R GK YC IEE L+L E+G L LL D  + ++SLKD+Y ++AEGK GC WE +EVYR+LK LG+I+G+H VPW+ K   N  
Subjt:  MAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLL-DHGNSILSLKDVYNKVAEGKSGCIWEQFEVYRHLKSLGFIVGKHKVPWSVKGLRNGS

Query:  DISPRSSIENEGATDLQSKDERSISELLDAIQLNELTPIFDVFLPHSKFRKSSPGDPNFMVYLTRGYPPPKKDIE
          +P    E+  A +   +D  S+++LL  + + +  P+FDV+LP+S+F+KSSPG+P+F+   +   PP K++I+
Subjt:  DISPRSSIENEGATDLQSKDERSISELLDAIQLNELTPIFDVFLPHSKFRKSSPGDPNFMVYLTRGYPPPKKDIE

AT3G57360.1 unknown protein

2.8e-58

43.07

Show/hide

Query:  MEATDWESSS-----GGASGDDEQDVIDEEECLCSSGNMRKLQFRKHASTARWNDDMEMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLL
        ME  DWE+SS     GG   DD+++         S G++ KLQFR  +S ARW  ++ MAEV   +G LWTTTGI+R GK YC IEE L+L E+G L +L
Subjt:  MEATDWESSS-----GGASGDDEQDVIDEEECLCSSGNMRKLQFRKHASTARWNDDMEMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLL

Query:  DHGNSI-LSLKDVYNKVAEGKSGCIWEQFEVYRHLKSLGFIVGKHKVPWSVKGLRNGSDISPRSSIENEGATDLQSKDERSISELLDAIQLNELTPIFDV
         + + I + LKD+Y K+AE KSGC WE +EVYR+LK LG+I+G+H V W++K      D +  +  E          D  ++++LL  +Q+ +   +FDV
Subjt:  DHGNSI-LSLKDVYNKVAEGKSGCIWEQFEVYRHLKSLGFIVGKHKVPWSVKGLRNGSDISPRSSIENEGATDLQSKDERSISELLDAIQLNELTPIFDV

Query:  FLPHSKFRKSSPGDPNFMVYLTRGYPPPKKDIEVIESICRGIPVKYCHVEHGRVCFFSFDKVELPVL
        +LP+S+F+KSSPG+P+F+   +   PP K+DI+V++      P+ +CH+  GR  FFSF  ++LPVL
Subjt:  FLPHSKFRKSSPGDPNFMVYLTRGYPPPKKDIEVIESICRGIPVKYCHVEHGRVCFFSFDKVELPVL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGGCTACCGATTGGGAAAGCTCTTCGGGAGGAGCTAGTGGCGACGACGAGCAAGACGTAATAGATGAAGAAGAATGTCTCTGTTCATCCGGGAACATGCGCAAGTT
GCAATTCAGGAAGCATGCTTCAACTGCTCGATGGAATGATGATATGGAAATGGCAGAAGTTTTAGAGAACAAGGGTAGTCTTTGGACGACAACTGGCATTGTACGTTGTG
GCAAGATTTATTGTTCCATTGAGGAAACTTTATTTCTTATTGAAGTTGGGGCCTTACATCTTCTGGATCATGGTAATTCAATTCTTTCGTTGAAAGATGTATACAATAAG
GTAGCTGAAGGAAAAAGTGGATGCATTTGGGAACAGTTTGAGGTTTATAGGCACCTCAAATCTCTTGGCTTCATTGTTGGTAAGCACAAAGTTCCTTGGTCTGTAAAGGG
TCTTAGGAATGGCAGTGACATTTCTCCTCGAAGTTCAATTGAAAACGAAGGAGCAACAGATTTACAATCAAAAGATGAGAGGTCGATCTCTGAACTATTAGATGCCATTC
AGCTCAATGAATTGACACCCATTTTTGATGTTTTTCTTCCACATAGCAAGTTTAGAAAGTCTTCTCCTGGTGACCCAAATTTTATGGTCTACTTGACTAGGGGATATCCA
CCTCCAAAAAAAGATATTGAAGTTATTGAGAGTATATGTAGAGGCATTCCGGTGAAATATTGTCATGTTGAGCATGGGCGTGTCTGTTTCTTTTCATTTGATAAGGTGGA
GCTGCCCGTCTTACCTTGA

mRNA sequence

Show/hide mRNA sequence

AAAAAACAATCCATATACGCCCTAAATTGGACCTTGCACCATCTCCGCCGCCCTTATTGCCGCCGGTGATTAACTTTTGACGCTAGCCACCACGCCGCCGCCGTCGGTCG
GCGCCACCAGATTCGGCGGTGCGCTCCACCGAACCCACGAACGGCGACCCACCGGTCTCTGCCTCTGCATCTTCTTCTCTGAGTTTTGATATTTGATTAGTCTGATGGAG
GCTACCGATTGGGAAAGCTCTTCGGGAGGAGCTAGTGGCGACGACGAGCAAGACGTAATAGATGAAGAAGAATGTCTCTGTTCATCCGGGAACATGCGCAAGTTGCAATT
CAGGAAGCATGCTTCAACTGCTCGATGGAATGATGATATGGAAATGGCAGAAGTTTTAGAGAACAAGGGTAGTCTTTGGACGACAACTGGCATTGTACGTTGTGGCAAGA
TTTATTGTTCCATTGAGGAAACTTTATTTCTTATTGAAGTTGGGGCCTTACATCTTCTGGATCATGGTAATTCAATTCTTTCGTTGAAAGATGTATACAATAAGGTAGCT
GAAGGAAAAAGTGGATGCATTTGGGAACAGTTTGAGGTTTATAGGCACCTCAAATCTCTTGGCTTCATTGTTGGTAAGCACAAAGTTCCTTGGTCTGTAAAGGGTCTTAG
GAATGGCAGTGACATTTCTCCTCGAAGTTCAATTGAAAACGAAGGAGCAACAGATTTACAATCAAAAGATGAGAGGTCGATCTCTGAACTATTAGATGCCATTCAGCTCA
ATGAATTGACACCCATTTTTGATGTTTTTCTTCCACATAGCAAGTTTAGAAAGTCTTCTCCTGGTGACCCAAATTTTATGGTCTACTTGACTAGGGGATATCCACCTCCA
AAAAAAGATATTGAAGTTATTGAGAGTATATGTAGAGGCATTCCGGTGAAATATTGTCATGTTGAGCATGGGCGTGTCTGTTTCTTTTCATTTGATAAGGTGGAGCTGCC
CGTCTTACCTTGACATTGTTGTGGATTGGTCATGGCATTTTCAACTGGATAAAATGAATCCAGCGAAAGAGTGTTTGATGGTCTTCGATAACTCGAAAACTACTTATTTT
AAATCTAATTTTGTTGGTTTCTAATTTTTTCAAATTTATAATCGAAATAAATTCAAAACATTAGACTAGTCTTTAAAGGATGACATTTTGGGCTTTGAAGGTATGTTCCC
TTCAAAATCTCGAGTTCGAAATTAACTTGTGACATTACTCCAATGTCTCTGGTGCCTGACTTAGGGACGGGGGTGGTTTACCCTTGTTTCACAAAAGAGTCTTCAAAGGG
TGGCCTTGTTTGTTGGTAGAGGCTCTTGGTATGTATGTCTTCTTGGAACTCTCAAGTTTCACTACTCATCCGTGAGCTTAATTGTAAAGTTTTTTGTTGTCTTCCAAGTC
CGGACTTTGGGACAGGTTCGGATGCCCTGCATATGTTAG

Protein sequence

Show/hide protein sequence

MEATDWESSSGGASGDDEQDVIDEEECLCSSGNMRKLQFRKHASTARWNDDMEMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDHGNSILSLKDVYNK
VAEGKSGCIWEQFEVYRHLKSLGFIVGKHKVPWSVKGLRNGSDISPRSSIENEGATDLQSKDERSISELLDAIQLNELTPIFDVFLPHSKFRKSSPGDPNFMVYLTRGYP
PPKKDIEVIESICRGIPVKYCHVEHGRVCFFSFDKVELPVLP

Sed0024079 (gene) of Chayote v1 genome