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Sed0024097 (gene) of Chayote v1 genome

Gene IDSed0024097
OrganismSechium edule (Chayote v1)
DescriptionProtein of unknown function (DUF1218)
Genome locationLG10:2164679..2165436
RNA-Seq ExpressionSed0024097
SyntenySed0024097
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009606 - Modifying wall lignin-1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647674.1 hypothetical protein Csa_003691 [Cucumis sativus]3.8e-7782.68Show/hide
Query:  MQQTYGLVVCILVIVMDVTAGILGIQAEIAQNKVNHFKLWIFECKDPSYNAFKLGLAAAILLGLAHALANLVGGCILVRSAEEYKRLTSNKQLAVGSLVF
        M++TYG+VVCIL+I++DVTAGILGIQAEIAQNKVNHFK+WIFECKDPSYNAFKLGLAAAILL LAHA+ANLVGGCILVRSA++YK L++NKQLAVGSL+F
Subjt:  MQQTYGLVVCILVIVMDVTAGILGIQAEIAQNKVNHFKLWIFECKDPSYNAFKLGLAAAILLGLAHALANLVGGCILVRSAEEYKRLTSNKQLAVGSLVF

Query:  AWIALVVGFSLLIAGAMYNTRSRTSCGLAHNHLLSIGGIVCFVHGLFAVAYYITATAEHRDEIKPPPQVNHPAGDTAQV
        AWIALVVGFSLLI+GAMYNTRSR SCGLAHN LLSIGGIVCFVHGLFAVAYY++ TA  R++ KPPPQ N PAG T  V
Subjt:  AWIALVVGFSLLIAGAMYNTRSRTSCGLAHNHLLSIGGIVCFVHGLFAVAYYITATAEHRDEIKPPPQVNHPAGDTAQV

XP_004134744.2 uncharacterized protein LOC101214369 [Cucumis sativus]3.8e-7782.68Show/hide
Query:  MQQTYGLVVCILVIVMDVTAGILGIQAEIAQNKVNHFKLWIFECKDPSYNAFKLGLAAAILLGLAHALANLVGGCILVRSAEEYKRLTSNKQLAVGSLVF
        M++TYG+VVCIL+I++DVTAGILGIQAEIAQNKVNHFK+WIFECKDPSYNAFKLGLAAAILL LAHA+ANLVGGCILVRSA++YK L++NKQLAVGSL+F
Subjt:  MQQTYGLVVCILVIVMDVTAGILGIQAEIAQNKVNHFKLWIFECKDPSYNAFKLGLAAAILLGLAHALANLVGGCILVRSAEEYKRLTSNKQLAVGSLVF

Query:  AWIALVVGFSLLIAGAMYNTRSRTSCGLAHNHLLSIGGIVCFVHGLFAVAYYITATAEHRDEIKPPPQVNHPAGDTAQV
        AWIALVVGFSLLI+GAMYNTRSR SCGLAHN LLSIGGIVCFVHGLFAVAYY++ TA  R++ KPPPQ N PAG T  V
Subjt:  AWIALVVGFSLLIAGAMYNTRSRTSCGLAHNHLLSIGGIVCFVHGLFAVAYYITATAEHRDEIKPPPQVNHPAGDTAQV

XP_022950216.1 uncharacterized protein LOC111453374 [Cucurbita moschata]3.5e-7884.36Show/hide
Query:  MQQTYGLVVCILVIVMDVTAGILGIQAEIAQNKVNHFKLWIFECKDPSYNAFKLGLAAAILLGLAHALANLVGGCILVRSAEEYKRLTSNKQLAVGSLVF
        MQ+  G VVCILVIVMDVTAGILGIQAE+AQNKVNHFK+WIFECKDPSYNAFKLGLAAAILLGLAHA+ANLVGGC+ VRSA+EYK LTSNKQLA GSLVF
Subjt:  MQQTYGLVVCILVIVMDVTAGILGIQAEIAQNKVNHFKLWIFECKDPSYNAFKLGLAAAILLGLAHALANLVGGCILVRSAEEYKRLTSNKQLAVGSLVF

Query:  AWIALVVGFSLLIAGAMYNTRSRTSCGLAHNHLLSIGGIVCFVHGLFAVAYYITATAEHRDEIKPPPQVNHPAGDTAQV
        AWIA+VVGFSLLI+GAMYNTRSR SCGLAHNHLLSIGGI CFVHGLFAVAYY++ATA +R+E +PPPQ  HPAG T  V
Subjt:  AWIALVVGFSLLIAGAMYNTRSRTSCGLAHNHLLSIGGIVCFVHGLFAVAYYITATAEHRDEIKPPPQVNHPAGDTAQV

XP_022977369.1 uncharacterized protein LOC111477717 [Cucurbita maxima]2.0e-7884.92Show/hide
Query:  MQQTYGLVVCILVIVMDVTAGILGIQAEIAQNKVNHFKLWIFECKDPSYNAFKLGLAAAILLGLAHALANLVGGCILVRSAEEYKRLTSNKQLAVGSLVF
        MQ+  G VVCILVIVMDVTAGILGIQAE+AQNKVNHFK+WIFECKDPSYNAFKLGLAAAILLGLAHA+ANLVGGC+ VRSA+EYK LTSNKQLA GSLVF
Subjt:  MQQTYGLVVCILVIVMDVTAGILGIQAEIAQNKVNHFKLWIFECKDPSYNAFKLGLAAAILLGLAHALANLVGGCILVRSAEEYKRLTSNKQLAVGSLVF

Query:  AWIALVVGFSLLIAGAMYNTRSRTSCGLAHNHLLSIGGIVCFVHGLFAVAYYITATAEHRDEIKPPPQVNHPAGDTAQV
        AWIALVVGFSLLI+GAMYNTRSR SCGLAH+HLLSIGGIVCFVHGLFAVAYY++ATA HR+  +PPPQ  HPAG T  V
Subjt:  AWIALVVGFSLLIAGAMYNTRSRTSCGLAHNHLLSIGGIVCFVHGLFAVAYYITATAEHRDEIKPPPQVNHPAGDTAQV

XP_038881391.1 uncharacterized protein LOC120072925 [Benincasa hispida]2.6e-7884.92Show/hide
Query:  MQQTYGLVVCILVIVMDVTAGILGIQAEIAQNKVNHFKLWIFECKDPSYNAFKLGLAAAILLGLAHALANLVGGCILVRSAEEYKRLTSNKQLAVGSLVF
        MQ+TYG +VC+L+I+MDVTAGILGIQAEIAQNKVNHFK+WIFECKDPSYNAFKLGLAAAILLGLAHA+ANL GG I VRSA EYK LT+NKQLAVGSLVF
Subjt:  MQQTYGLVVCILVIVMDVTAGILGIQAEIAQNKVNHFKLWIFECKDPSYNAFKLGLAAAILLGLAHALANLVGGCILVRSAEEYKRLTSNKQLAVGSLVF

Query:  AWIALVVGFSLLIAGAMYNTRSRTSCGLAHNHLLSIGGIVCFVHGLFAVAYYITATAEHRDEIKPPPQVNHPAGDTAQV
        AWIALVVGFSLLI+GAMYNTRSR SCGLAHN LLSIGGIVCFVHGLFAVAYY++ATAEHR+E KPPPQ N PA    QV
Subjt:  AWIALVVGFSLLIAGAMYNTRSRTSCGLAHNHLLSIGGIVCFVHGLFAVAYYITATAEHRDEIKPPPQVNHPAGDTAQV

TrEMBL top hitse value%identityAlignment
A0A0A0KLA9 Uncharacterized protein1.9e-7782.68Show/hide
Query:  MQQTYGLVVCILVIVMDVTAGILGIQAEIAQNKVNHFKLWIFECKDPSYNAFKLGLAAAILLGLAHALANLVGGCILVRSAEEYKRLTSNKQLAVGSLVF
        M++TYG+VVCIL+I++DVTAGILGIQAEIAQNKVNHFK+WIFECKDPSYNAFKLGLAAAILL LAHA+ANLVGGCILVRSA++YK L++NKQLAVGSL+F
Subjt:  MQQTYGLVVCILVIVMDVTAGILGIQAEIAQNKVNHFKLWIFECKDPSYNAFKLGLAAAILLGLAHALANLVGGCILVRSAEEYKRLTSNKQLAVGSLVF

Query:  AWIALVVGFSLLIAGAMYNTRSRTSCGLAHNHLLSIGGIVCFVHGLFAVAYYITATAEHRDEIKPPPQVNHPAGDTAQV
        AWIALVVGFSLLI+GAMYNTRSR SCGLAHN LLSIGGIVCFVHGLFAVAYY++ TA  R++ KPPPQ N PAG T  V
Subjt:  AWIALVVGFSLLIAGAMYNTRSRTSCGLAHNHLLSIGGIVCFVHGLFAVAYYITATAEHRDEIKPPPQVNHPAGDTAQV

A0A6J1CLY7 uncharacterized protein LOC1110124999.2e-7783.89Show/hide
Query:  MQQTYGLVVCILVIVMDVTAGILGIQAEIAQNKVNHFKLWIFECKDPSYNAFKLGLAAAILLGLAHALANLVGGCILVRSAEEYKRLTSNKQLAVGSLVF
        MQ+TYGLVVCILVIVMDVTAGILGIQAEIAQNKVNHFK+WIFECKDPSYNAFKLGLAAAILLGLAHA+ANL GGC  VRSA+EYK LT+NKQ AV SLVF
Subjt:  MQQTYGLVVCILVIVMDVTAGILGIQAEIAQNKVNHFKLWIFECKDPSYNAFKLGLAAAILLGLAHALANLVGGCILVRSAEEYKRLTSNKQLAVGSLVF

Query:  AWIALVVGFSLLIAGAMYNTRSRTSCGLAHNHLLSIGGIVCFVHGLFAVAYYITATAEHRDEIK-PPPQVNHPAGDTAQV
        AWIAL++GFSLLI+GAMYNTRSR SCGLAHN LLSIGGIVCF+HGLF VAYYITATA  R+E K PPPQ  +PAG T  V
Subjt:  AWIALVVGFSLLIAGAMYNTRSRTSCGLAHNHLLSIGGIVCFVHGLFAVAYYITATAEHRDEIK-PPPQVNHPAGDTAQV

A0A6J1GE80 uncharacterized protein LOC1114533741.7e-7884.36Show/hide
Query:  MQQTYGLVVCILVIVMDVTAGILGIQAEIAQNKVNHFKLWIFECKDPSYNAFKLGLAAAILLGLAHALANLVGGCILVRSAEEYKRLTSNKQLAVGSLVF
        MQ+  G VVCILVIVMDVTAGILGIQAE+AQNKVNHFK+WIFECKDPSYNAFKLGLAAAILLGLAHA+ANLVGGC+ VRSA+EYK LTSNKQLA GSLVF
Subjt:  MQQTYGLVVCILVIVMDVTAGILGIQAEIAQNKVNHFKLWIFECKDPSYNAFKLGLAAAILLGLAHALANLVGGCILVRSAEEYKRLTSNKQLAVGSLVF

Query:  AWIALVVGFSLLIAGAMYNTRSRTSCGLAHNHLLSIGGIVCFVHGLFAVAYYITATAEHRDEIKPPPQVNHPAGDTAQV
        AWIA+VVGFSLLI+GAMYNTRSR SCGLAHNHLLSIGGI CFVHGLFAVAYY++ATA +R+E +PPPQ  HPAG T  V
Subjt:  AWIALVVGFSLLIAGAMYNTRSRTSCGLAHNHLLSIGGIVCFVHGLFAVAYYITATAEHRDEIKPPPQVNHPAGDTAQV

A0A6J1IR67 uncharacterized protein LOC1114777179.8e-7984.92Show/hide
Query:  MQQTYGLVVCILVIVMDVTAGILGIQAEIAQNKVNHFKLWIFECKDPSYNAFKLGLAAAILLGLAHALANLVGGCILVRSAEEYKRLTSNKQLAVGSLVF
        MQ+  G VVCILVIVMDVTAGILGIQAE+AQNKVNHFK+WIFECKDPSYNAFKLGLAAAILLGLAHA+ANLVGGC+ VRSA+EYK LTSNKQLA GSLVF
Subjt:  MQQTYGLVVCILVIVMDVTAGILGIQAEIAQNKVNHFKLWIFECKDPSYNAFKLGLAAAILLGLAHALANLVGGCILVRSAEEYKRLTSNKQLAVGSLVF

Query:  AWIALVVGFSLLIAGAMYNTRSRTSCGLAHNHLLSIGGIVCFVHGLFAVAYYITATAEHRDEIKPPPQVNHPAGDTAQV
        AWIALVVGFSLLI+GAMYNTRSR SCGLAH+HLLSIGGIVCFVHGLFAVAYY++ATA HR+  +PPPQ  HPAG T  V
Subjt:  AWIALVVGFSLLIAGAMYNTRSRTSCGLAHNHLLSIGGIVCFVHGLFAVAYYITATAEHRDEIKPPPQVNHPAGDTAQV

A0A6J1KV41 uncharacterized protein LOC1114967089.2e-7782.12Show/hide
Query:  MQQTYGLVVCILVIVMDVTAGILGIQAEIAQNKVNHFKLWIFECKDPSYNAFKLGLAAAILLGLAHALANLVGGCILVRSAEEYKRLTSNKQLAVGSLVF
        MQ+TYG +VC+LVI+MDVTAGILGIQAEIAQNKVNH K+WIFECKDPSYNAFKLGLAAAILLG+AHA+ANL+GGCI VRSAEEYKRLTS KQ+AV SL+F
Subjt:  MQQTYGLVVCILVIVMDVTAGILGIQAEIAQNKVNHFKLWIFECKDPSYNAFKLGLAAAILLGLAHALANLVGGCILVRSAEEYKRLTSNKQLAVGSLVF

Query:  AWIALVVGFSLLIAGAMYNTRSRTSCGLAHNHLLSIGGIVCFVHGLFAVAYYITATAEHRDEIKPPPQVNHPAGDTAQV
        AWIALVVGFS+LI+GAMYNTRSR SCG+AHNHLLSIGGIVCFVHGLFAVAY I+ATA  RDE+KPP    +PAG T  V
Subjt:  AWIALVVGFSLLIAGAMYNTRSRTSCGLAHNHLLSIGGIVCFVHGLFAVAYYITATAEHRDEIKPPPQVNHPAGDTAQV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G05291.1 Protein of unknown function (DUF1218)1.9e-2138.55Show/hide
Query:  LVVCILVIV-MDVTAGILGIQAEIAQNKVNHFKLWIFECKDPSYNAFKLGLAAAILLGLAHALANLVGGCILVRSAEEYKRLTSNK---QLAVGSLVFAW
        ++VCI++ V +D+ AG +G+QA+ AQ  V H KL   ECK PS  AF LG+ A   L  AH  AN++ GC +    +    L  NK      +  L   W
Subjt:  LVVCILVIV-MDVTAGILGIQAEIAQNKVNHFKLWIFECKDPSYNAFKLGLAAAILLGLAHALANLVGGCILVRSAEEYKRLTSNK---QLAVGSLVFAW

Query:  IALVVGFSLLIAGAMYNTRSRTSCGLAHNHLLSIGGIVCFVHGLFAVAYYIT---ATAEHRDEIKP
        +  + G  +L  G   NT SR  C   +NH+ SIGG VCF+H + +  YYI+   A A H    KP
Subjt:  IALVVGFSLLIAGAMYNTRSRTSCGLAHNHLLSIGGIVCFVHGLFAVAYYIT---ATAEHRDEIKP

AT1G11500.1 Protein of unknown function (DUF1218)1.3e-3040.68Show/hide
Query:  MQQTYGLVVCILVIVMDVTAGILGIQAEIAQNKVNHFKLWIFE------C-KDPSYNAFKLGLAAAILLGLAHALANLVGGCILVRSAEEYKRLTSNKQL
        M+   G +V +++I  D+TA +LGI+AEIAQ+K  H             C + PS  AF  G+AA +LL + H LAN++GGC  +RS +++KR T+NK L
Subjt:  MQQTYGLVVCILVIVMDVTAGILGIQAEIAQNKVNHFKLWIFE------C-KDPSYNAFKLGLAAAILLGLAHALANLVGGCILVRSAEEYKRLTSNKQL

Query:  AVGSLVFAWIALVVGFSLLIAGAMYNTRSRTSCGLAHNHLLSIGGIVCFVHGLFAVAYYITATAEHRDEIKPPPQVN
        AV  LV +WI  VV +S L+ G + N+R+   C L H     IGGI C  HG+   AYY++A A  +++ +   Q N
Subjt:  AVGSLVFAWIALVVGFSLLIAGAMYNTRSRTSCGLAHNHLLSIGGIVCFVHGLFAVAYYITATAEHRDEIKPPPQVN

AT2G32280.1 Protein of unknown function (DUF1218)1.4e-4852.44Show/hide
Query:  MQQTYGLVVCILVIVMDVTAGILGIQAEIAQNKVNHFKLWIFECKDPSYNAFKLGLAAAILLGLAHALANLVGGCILVRSAEEYKRLTSNKQLAVGSLVF
        M +  G++VC++++ +DV A ILGIQAE+AQN+V H +LW+FEC++PS +AF+LGL AA +L +AH L NLVGGC+ + S +E++R +S +Q+++  LV 
Subjt:  MQQTYGLVVCILVIVMDVTAGILGIQAEIAQNKVNHFKLWIFECKDPSYNAFKLGLAAAILLGLAHALANLVGGCILVRSAEEYKRLTSNKQLAVGSLVF

Query:  AWIALVVGFSLLIAGAMYNTRSRTSCGLAHNHLLSIGGIVCFVHGLFAVAYYITATAEHRDEIK
         WI   VGF  ++ G M N++SR+SCG  H+H LSIGGI+CF+H LF VAYY++ATA  +DE K
Subjt:  AWIALVVGFSLLIAGAMYNTRSRTSCGLAHNHLLSIGGIVCFVHGLFAVAYYITATAEHRDEIK

AT4G21310.1 Protein of unknown function (DUF1218)3.0e-5662.35Show/hide
Query:  MQQTYGLVVCILVIVMDVTAGILGIQAEIAQNKVNHFKLWIFECKDPSYNAFKLGLAAAILLGLAHALANLVGGCILVRSAEEYKRLTSNKQLAVGSLVF
        M +  G  +CIL++ MDV+AGILGI+AEIAQNKV H K+WIFEC+DPSY AFK GLAA ILL LAH  AN +GGC+ V S ++ ++ ++NKQLAV SL+F
Subjt:  MQQTYGLVVCILVIVMDVTAGILGIQAEIAQNKVNHFKLWIFECKDPSYNAFKLGLAAAILLGLAHALANLVGGCILVRSAEEYKRLTSNKQLAVGSLVF

Query:  AWIALVVGFSLLIAGAMYNTRSRTSCGLAHNHLLSIGGIVCFVHGLFAVAYYITATAEHRDE
         WI L + FS+LI G M N+RSR +CG++H+ +LSIGGI+CFVHGLFAVAYYI+ATA  R++
Subjt:  AWIALVVGFSLLIAGAMYNTRSRTSCGLAHNHLLSIGGIVCFVHGLFAVAYYITATAEHRDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCAAACTTATGGTCTTGTTGTCTGCATTTTGGTTATTGTTATGGATGTTACAGCCGGAATTCTAGGAATTCAGGCTGAAATAGCACAAAACAAGGTGAACCATTT
CAAACTGTGGATATTTGAGTGCAAGGATCCAAGCTATAATGCTTTCAAGTTAGGTTTGGCTGCAGCCATACTGCTTGGCCTTGCTCATGCCCTTGCCAACTTGGTTGGTG
GCTGCATTTTGGTTCGATCTGCGGAAGAATACAAAAGGTTAACCTCGAACAAGCAACTTGCTGTGGGTTCACTCGTATTTGCATGGATTGCACTTGTGGTTGGATTCTCG
CTGCTTATCGCAGGGGCGATGTATAACACAAGGTCAAGGACATCGTGCGGGCTTGCTCACAATCATCTTCTGTCTATAGGCGGGATTGTTTGCTTTGTACACGGCTTGTT
TGCAGTTGCTTATTATATTACTGCCACAGCAGAACACAGGGATGAAATAAAGCCACCACCACAGGTGAACCACCCTGCCGGAGACACAGCCCAAGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGCAAACTTATGGTCTTGTTGTCTGCATTTTGGTTATTGTTATGGATGTTACAGCCGGAATTCTAGGAATTCAGGCTGAAATAGCACAAAACAAGGTGAACCATTT
CAAACTGTGGATATTTGAGTGCAAGGATCCAAGCTATAATGCTTTCAAGTTAGGTTTGGCTGCAGCCATACTGCTTGGCCTTGCTCATGCCCTTGCCAACTTGGTTGGTG
GCTGCATTTTGGTTCGATCTGCGGAAGAATACAAAAGGTTAACCTCGAACAAGCAACTTGCTGTGGGTTCACTCGTATTTGCATGGATTGCACTTGTGGTTGGATTCTCG
CTGCTTATCGCAGGGGCGATGTATAACACAAGGTCAAGGACATCGTGCGGGCTTGCTCACAATCATCTTCTGTCTATAGGCGGGATTGTTTGCTTTGTACACGGCTTGTT
TGCAGTTGCTTATTATATTACTGCCACAGCAGAACACAGGGATGAAATAAAGCCACCACCACAGGTGAACCACCCTGCCGGAGACACAGCCCAAGTTTAG
Protein sequenceShow/hide protein sequence
MQQTYGLVVCILVIVMDVTAGILGIQAEIAQNKVNHFKLWIFECKDPSYNAFKLGLAAAILLGLAHALANLVGGCILVRSAEEYKRLTSNKQLAVGSLVFAWIALVVGFS
LLIAGAMYNTRSRTSCGLAHNHLLSIGGIVCFVHGLFAVAYYITATAEHRDEIKPPPQVNHPAGDTAQV