CuGenDBv2

Gene ID	Sed0024111
Organism	Sechium edule (Chayote v1)
Description	zinc finger SWIM domain-containing protein 7
Genome location	LG07:9562756..9567279
RNA-Seq Expression	Sed0024111
Synteny	Sed0024111
Gene Ontology terms	GO:0000724 - double-strand break repair via homologous recombination (biological process) GO:0097196 - Shu complex (cellular component) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6600296.1 Zinc finger SWIM domain-containing protein 7, partial [Cucurbita argyrosperma subsp. sororia]

1.7e-61

90.91

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Query:  MGASTVVAEAMWREIESTRSVTDDQLSVLHFLFGKNFERAIRIVDQSRVKKISAEPSGRSIFQVMGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
        M AST+ AEA+W++IESTRSVTDDQLS+LHFLFGKNFERA RIVDQS VKKIS +PSGRSIFQV+GESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MGASTVVAEAMWREIESTRSVTDDQLSVLHFLFGKNFERAIRIVDQSRVKKISAEPSGRSIFQVMGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGACIEVKVSDEELAILLSNL
        KHQLAARLAASLGACIEVKVSDEELAILLSNL
Subjt:  KHQLAARLAASLGACIEVKVSDEELAILLSNL

KAG7030956.1 Zinc finger SWIM domain-containing protein 7 [Cucurbita argyrosperma subsp. argyrosperma]

9.7e-62

90.91

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Query:  MGASTVVAEAMWREIESTRSVTDDQLSVLHFLFGKNFERAIRIVDQSRVKKISAEPSGRSIFQVMGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
        M AST+ AEA+W++IESTRSVTDDQLS+LHFLFGKNFERA RIVDQS VKKIS EPSGRS+FQV+GESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MGASTVVAEAMWREIESTRSVTDDQLSVLHFLFGKNFERAIRIVDQSRVKKISAEPSGRSIFQVMGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGACIEVKVSDEELAILLSNL
        KHQLAARLAASLGACIEVKVSDEELAILLSNL
Subjt:  KHQLAARLAASLGACIEVKVSDEELAILLSNL

XP_022942858.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita moschata]

7.5e-62

91.67

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Query:  MGASTVVAEAMWREIESTRSVTDDQLSVLHFLFGKNFERAIRIVDQSRVKKISAEPSGRSIFQVMGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
        M AST+ AEA+W++IESTRSVTDDQLS+LHFLFGKNFERA RIVDQS VKKIS EPSGRSIFQV+GESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MGASTVVAEAMWREIESTRSVTDDQLSVLHFLFGKNFERAIRIVDQSRVKKISAEPSGRSIFQVMGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGACIEVKVSDEELAILLSNL
        KHQLAARLAASLGACIEVKVSDEELAILLSNL
Subjt:  KHQLAARLAASLGACIEVKVSDEELAILLSNL

XP_022983272.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita maxima]

9.7e-62

90.91

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Query:  MGASTVVAEAMWREIESTRSVTDDQLSVLHFLFGKNFERAIRIVDQSRVKKISAEPSGRSIFQVMGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
        M AST+VAEA+W++IESTRSVTDDQLS+LHFLFGKNFERA RIVDQS VKKIS EPSGRSIFQV+GESRRKEEY CFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MGASTVVAEAMWREIESTRSVTDDQLSVLHFLFGKNFERAIRIVDQSRVKKISAEPSGRSIFQVMGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGACIEVKVSDEELAILLSNL
        KHQLAARLAASLGAC+EVKVSDEELAILLSNL
Subjt:  KHQLAARLAASLGACIEVKVSDEELAILLSNL

XP_023526305.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita pepo subsp. pepo]

3.7e-61

90.15

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Query:  MGASTVVAEAMWREIESTRSVTDDQLSVLHFLFGKNFERAIRIVDQSRVKKISAEPSGRSIFQVMGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
        M AST+ AEA+W++IESTRSVTDDQLS+LHFLFGKNFERA RIVDQS VK+IS +PSGRSIFQV+GESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MGASTVVAEAMWREIESTRSVTDDQLSVLHFLFGKNFERAIRIVDQSRVKKISAEPSGRSIFQVMGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGACIEVKVSDEELAILLSNL
        KHQLAARLAASLGACIEVKVSDEELAILLSNL
Subjt:  KHQLAARLAASLGACIEVKVSDEELAILLSNL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KWG5 SWIM-type domain-containing protein

3.7e-59

88.64

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Query:  MGASTVVAEAMWREIESTRSVTDDQLSVLHFLFGKNFERAIRIVDQSRVKKISAEPSGRSIFQVMGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
        M AS VVAEA+W++IESTR VTDDQLS+LHFLFGKNFERA RIVDQ  VKKIS  PS RSIFQV+GESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MGASTVVAEAMWREIESTRSVTDDQLSVLHFLFGKNFERAIRIVDQSRVKKISAEPSGRSIFQVMGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGACIEVKVSDEELAILLSNL
        KHQLAARLAAS+GACIEVKVSDEELAILLSNL
Subjt:  KHQLAARLAASLGACIEVKVSDEELAILLSNL

A0A1S3BZP2 zinc finger SWIM domain-containing protein 7

1.9e-58

87.88

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Query:  MGASTVVAEAMWREIESTRSVTDDQLSVLHFLFGKNFERAIRIVDQSRVKKISAEPSGRSIFQVMGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
        M AS VVAEA+W+ IESTR VTDDQLS+LHFLFGKNFERA RIVDQ  VKKIS  PS RSIFQV+GESRRKEEY CFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MGASTVVAEAMWREIESTRSVTDDQLSVLHFLFGKNFERAIRIVDQSRVKKISAEPSGRSIFQVMGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGACIEVKVSDEELAILLSNL
        KHQLAARLAAS+GACIEVKVSDEELAILLSNL
Subjt:  KHQLAARLAASLGACIEVKVSDEELAILLSNL

A0A6J1D5Z4 zinc finger SWIM domain-containing protein 7

2.0e-57

86.36

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Query:  MGASTVVAEAMWREIESTRSVTDDQLSVLHFLFGKNFERAIRIVDQSRVKKISAEPSGRSIFQVMGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
        M AS +VAEA+W++I+STRSVTDDQLSVLHFLFGKNFERA RIVDQ  VKKI  EPSGRSIFQV+GESRRKEEY CFPENFCACYSFFYD VNRGEQLCC
Subjt:  MGASTVVAEAMWREIESTRSVTDDQLSVLHFLFGKNFERAIRIVDQSRVKKISAEPSGRSIFQVMGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGACIEVKVSDEELAILLSNL
        KHQLAARLAASLGA IE KVSDEELA+LLSNL
Subjt:  KHQLAARLAASLGACIEVKVSDEELAILLSNL

A0A6J1FSJ7 zinc finger SWIM domain-containing protein 7 isoform X2

3.6e-62

91.67

Show/hide

Query:  MGASTVVAEAMWREIESTRSVTDDQLSVLHFLFGKNFERAIRIVDQSRVKKISAEPSGRSIFQVMGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
        M AST+ AEA+W++IESTRSVTDDQLS+LHFLFGKNFERA RIVDQS VKKIS EPSGRSIFQV+GESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MGASTVVAEAMWREIESTRSVTDDQLSVLHFLFGKNFERAIRIVDQSRVKKISAEPSGRSIFQVMGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGACIEVKVSDEELAILLSNL
        KHQLAARLAASLGACIEVKVSDEELAILLSNL
Subjt:  KHQLAARLAASLGACIEVKVSDEELAILLSNL

A0A6J1J6W2 zinc finger SWIM domain-containing protein 7 isoform X2

4.7e-62

90.91

Show/hide

Query:  MGASTVVAEAMWREIESTRSVTDDQLSVLHFLFGKNFERAIRIVDQSRVKKISAEPSGRSIFQVMGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
        M AST+VAEA+W++IESTRSVTDDQLS+LHFLFGKNFERA RIVDQS VKKIS EPSGRSIFQV+GESRRKEEY CFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MGASTVVAEAMWREIESTRSVTDDQLSVLHFLFGKNFERAIRIVDQSRVKKISAEPSGRSIFQVMGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGACIEVKVSDEELAILLSNL
        KHQLAARLAASLGAC+EVKVSDEELAILLSNL
Subjt:  KHQLAARLAASLGACIEVKVSDEELAILLSNL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G33925.1 unknown protein

2.7e-46

63.64

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Query:  MGASTVVAEAMWREIESTRSVTDDQLSVLHFLFGKNFERAIRIVDQSRVKKISAEPSGRSIFQVMGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
        M  + +VA+A+W  IEST SVT++QLS+L  LFGKN E+A RI+D+  VKKIS  PSGRSIFQV+GES+++EEYLCFP ++C CYSFFYD+V+RGE  CC
Subjt:  MGASTVVAEAMWREIESTRSVTDDQLSVLHFLFGKNFERAIRIVDQSRVKKISAEPSGRSIFQVMGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGACIEVKVSDEELAILLSNL
        KHQLAARLA+SLG   E++VSD+ LA++LS +
Subjt:  KHQLAARLAASLGACIEVKVSDEELAILLSNL

AT4G33925.2 unknown protein

5.4e-42

64.71

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Query:  MGASTVVAEAMWREIESTRSVTDDQLSVLHFLFGKNFERAIRIVDQSRVKKISAEPSGRSIFQVMGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
        M  + +VA+A+W  IEST SVT++QLS+L  LFGKN E+A RI+D+  VKKIS  PSGRSIFQV+GES+++EEYLCFP ++C CYSFFYD+V+RGE  CC
Subjt:  MGASTVVAEAMWREIESTRSVTDDQLSVLHFLFGKNFERAIRIVDQSRVKKISAEPSGRSIFQVMGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGACIEVK
        KHQLAARLA+SLG   E++
Subjt:  KHQLAARLAASLGACIEVK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGTGCGAGTACTGTCGTAGCCGAAGCAATGTGGAGGGAGATCGAGTCGACTCGATCAGTCACAGATGATCAGCTTTCAGTCTTACATTTCTTGTTCGGTAAGAACTT
CGAGCGAGCTATTCGTATTGTGGATCAAAGCCGGGTGAAGAAAATTTCTGCTGAGCCCAGCGGACGGTCTATCTTTCAGGTTATGGGAGAATCTAGAAGGAAAGAGGAAT
ATTTATGCTTCCCAGAAAACTTCTGTGCCTGTTATTCGTTCTTCTACGACATTGTGAACAGAGGAGAACAACTTTGTTGCAAGCATCAGTTAGCTGCAAGGCTTGCTGCT
TCACTGGGGGCTTGCATTGAAGTTAAAGTATCTGATGAAGAGTTGGCGATATTATTGTCCAATCTTTAA

mRNA sequence

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GCGGTTCAAAAACGGGCATCCACCATTATCCAAGTATTGGAGATTGAACCAACATAATGAAGGAAAACTTTACCCTAATCTTGGACAAGGAATCTCCATCGAAATGGGTG
CGAGTACTGTCGTAGCCGAAGCAATGTGGAGGGAGATCGAGTCGACTCGATCAGTCACAGATGATCAGCTTTCAGTCTTACATTTCTTGTTCGGTAAGAACTTCGAGCGA
GCTATTCGTATTGTGGATCAAAGCCGGGTGAAGAAAATTTCTGCTGAGCCCAGCGGACGGTCTATCTTTCAGGTTATGGGAGAATCTAGAAGGAAAGAGGAATATTTATG
CTTCCCAGAAAACTTCTGTGCCTGTTATTCGTTCTTCTACGACATTGTGAACAGAGGAGAACAACTTTGTTGCAAGCATCAGTTAGCTGCAAGGCTTGCTGCTTCACTGG
GGGCTTGCATTGAAGTTAAAGTATCTGATGAAGAGTTGGCGATATTATTGTCCAATCTTTAAGACTTTAGCGCCTTTATCGAAGCCAAAGATCTCACCGCTCGAAGTTTG
AGAGATTTTGTACGAGGAAATTTTTGGGCATTACATTTAGGTTATTTGTCCAATGAAAGATGAGGGTTCAAAAGTTTCATATATTCTGAAAATGGATAAAAGACCGTTGG
TTATTTACTTCACATGCTCTAACTTTCCAGTAAGTTTAGTTTAATATGTCAAATATTACAAGTTTGAAATTTCTGTAATATATATATATATATATATATATATATATAGA
TATTGTAATATTTTCAAGTTTTGGGCATTCAGACTGGCATATTTGCTCTTCGAATAGTTAGGGTGGGCTCCCAATAGTGAATTGTCGAAAAGAAGGAAAAATGTAAGAAC
CCATTTGTAACAAAAGGATAAAAATCCATAGCACG

Protein sequence

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MGASTVVAEAMWREIESTRSVTDDQLSVLHFLFGKNFERAIRIVDQSRVKKISAEPSGRSIFQVMGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAA
SLGACIEVKVSDEELAILLSNL

Sed0024111 (gene) of Chayote v1 genome