CuGenDBv2

Gene ID	Sed0024146
Organism	Sechium edule (Chayote v1)
Description	FAM50A-like protein
Genome location	LG01:69937702..69947816
RNA-Seq Expression	Sed0024146
Synteny	Sed0024146
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6571667.1 hypothetical protein SDJN03_28395, partial [Cucurbita argyrosperma subsp. sororia]

2.9e-61

78.74

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Query:  MENLQNKQVSETESSFPIRLIDEGKEYRIDNDIMTRRLKNRERQRRYRARKRLQEEIRKASTMMKQPTQTGTYFQPNGVANNPLTRVHCSRNWKKEARKA
        ME +QNK V+E ESSFP++L D+ K  RIDNDIMTRRLKNRERQRRYRARKRL+EEI+KAST +K PTQTGTYFQPNGVANNPLTRVHCSRNWKKEAR A
Subjt:  MENLQNKQVSETESSFPIRLIDEGKEYRIDNDIMTRRLKNRERQRRYRARKRLQEEIRKASTMMKQPTQTGTYFQPNGVANNPLTRVHCSRNWKKEARKA

Query:  NASRGL-EASCNSSNMAARSSTCVSQMQCVPFSNLEPQLEMQSHLEPPTERLVSETAKKVLCQRNWKADARKKK
        + SRGL EASCNSSNMAA+SST   Q+QC P S+ EPQ E +SH EPPTE+LVSETAKKVL +RNWKADARKKK
Subjt:  NASRGL-EASCNSSNMAARSSTCVSQMQCVPFSNLEPQLEMQSHLEPPTERLVSETAKKVLCQRNWKADARKKK

XP_022155993.1 uncharacterized protein LOC111022965 [Momordica charantia]

1.4e-68

80.92

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Query:  MENLQNKQVSETESSFPIRLIDEGKEYRIDNDIMTRRLKNRERQRRYRARKRLQEEIRKASTMMKQPTQTGTYFQPNGVANNPLTRVHCSRNWKKEARKA
        MEN+QNKQV ET+ SFP++L+D+GK+YRIDNDIMTRRLKNRERQRRYRARKRL+EEI+KAST +KQPTQTGTYFQPNG+ANNPLTRVHC+RNWKK+AR  
Subjt:  MENLQNKQVSETESSFPIRLIDEGKEYRIDNDIMTRRLKNRERQRRYRARKRLQEEIRKASTMMKQPTQTGTYFQPNGVANNPLTRVHCSRNWKKEARKA

Query:  NASRGLEASCNSSNMAARSSTCVSQMQCVPFSNLEPQLEMQSHLEPPTERLVSETAKKVLCQRNWKADARKKK
        + SRGLEASCNSSNMAAR+ST  SQMQC+P SN EPQLE QSHLEPP E+L+S+TAKKVL +RNWKADARKKK
Subjt:  NASRGLEASCNSSNMAARSSTCVSQMQCVPFSNLEPQLEMQSHLEPPTERLVSETAKKVLCQRNWKADARKKK

XP_022963572.1 uncharacterized protein LOC111463869 [Cucurbita moschata]

2.9e-61

78.74

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Query:  MENLQNKQVSETESSFPIRLIDEGKEYRIDNDIMTRRLKNRERQRRYRARKRLQEEIRKASTMMKQPTQTGTYFQPNGVANNPLTRVHCSRNWKKEARKA
        ME +QNK V+E ESSFP++L D+ K  RIDNDIMTRRLKNRERQRRYRARKRL+EEI+KAST +K PTQTGTYFQPNGVANNPLTRVHCSRNWKKEAR A
Subjt:  MENLQNKQVSETESSFPIRLIDEGKEYRIDNDIMTRRLKNRERQRRYRARKRLQEEIRKASTMMKQPTQTGTYFQPNGVANNPLTRVHCSRNWKKEARKA

Query:  NASRGL-EASCNSSNMAARSSTCVSQMQCVPFSNLEPQLEMQSHLEPPTERLVSETAKKVLCQRNWKADARKKK
        + SRGL EASCNSSNMAA+SST   Q+QC P S+ EPQ E +SH EPPTE+LVSETAKKVL +RNWKADARKKK
Subjt:  NASRGL-EASCNSSNMAARSSTCVSQMQCVPFSNLEPQLEMQSHLEPPTERLVSETAKKVLCQRNWKADARKKK

XP_022967395.1 uncharacterized protein LOC111466937 [Cucurbita maxima]

7.7e-62

79.31

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Query:  MENLQNKQVSETESSFPIRLIDEGKEYRIDNDIMTRRLKNRERQRRYRARKRLQEEIRKASTMMKQPTQTGTYFQPNGVANNPLTRVHCSRNWKKEARKA
        ME +QNK V+E ESSFP++L D+ K  RIDNDIMTRRLKNRERQRRYRARKRL+EEI+KAST +K PTQTGTYFQPNGVANNPLTRVHCSRNWKKEAR A
Subjt:  MENLQNKQVSETESSFPIRLIDEGKEYRIDNDIMTRRLKNRERQRRYRARKRLQEEIRKASTMMKQPTQTGTYFQPNGVANNPLTRVHCSRNWKKEARKA

Query:  NASRGL-EASCNSSNMAARSSTCVSQMQCVPFSNLEPQLEMQSHLEPPTERLVSETAKKVLCQRNWKADARKKK
        + SRGL EASCNSSNMAA+SST   Q+QC P SN EPQ E +SH EPPTE+LVSETAKKVL +RNWKADARKKK
Subjt:  NASRGL-EASCNSSNMAARSSTCVSQMQCVPFSNLEPQLEMQSHLEPPTERLVSETAKKVLCQRNWKADARKKK

XP_038886879.1 uncharacterized protein LOC120077088 [Benincasa hispida]

1.6e-59

76.88

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Query:  MENLQNKQVSETESSFPIRLIDEGKEYRIDNDIMTRRLKNRERQRRYRARKRLQEEIRKASTMMKQPTQTGTYFQPNGVANNPLTRVHCSRNWKKEARKA
        MEN+QN+ V+ TE SFP++L+++ K+ RI+NDIMTRRLKNRERQRRYRARKRL+EEIRKAST +KQP QTGTYFQPNG  NNPL+RVHCSRNWKKEAR A
Subjt:  MENLQNKQVSETESSFPIRLIDEGKEYRIDNDIMTRRLKNRERQRRYRARKRLQEEIRKASTMMKQPTQTGTYFQPNGVANNPLTRVHCSRNWKKEARKA

Query:  NASRGL-EASCNSSNMAARSSTCVSQMQCVPFSNLEPQLEMQSHLEPPTERLVSETAKKVLCQRNWKADARKK
        N SRGL EASCNSSNMAAR+ST  SQ+QC+P SN++PQLE  SH EPPTE L+SETAKKVL +RNWKADARKK
Subjt:  NASRGL-EASCNSSNMAARSSTCVSQMQCVPFSNLEPQLEMQSHLEPPTERLVSETAKKVLCQRNWKADARKK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LK46 Uncharacterized protein

3.7e-54

71.84

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Query:  MENLQNKQVSETESSFPIRLIDEGKEYRIDNDIMTRRLKNRERQRRYRARKRLQEEIRKASTMMKQPTQTGTYFQPNGVANNPLTRVHCSRNWKKEARKA
        ME++QN+ V           +D+ K+ RIDNDIMTRRLKNRERQRRYRARKRL+EEI+KAST  KQP QTGTYFQPNG+ANNPLTRVHCSRNWKKEAR A
Subjt:  MENLQNKQVSETESSFPIRLIDEGKEYRIDNDIMTRRLKNRERQRRYRARKRLQEEIRKASTMMKQPTQTGTYFQPNGVANNPLTRVHCSRNWKKEARKA

Query:  NASRGL-EASCNSSNMAARSSTCVSQMQCVPFSNLEPQLEMQSHLEPPTERLVSETAKKVLCQRNWKADARKKK
        N SRG+ E SCNSSNMAA++ST  SQ+QCVP SN++PQLE  SH + P E+LVSETAKKV  +RNWKADARKKK
Subjt:  NASRGL-EASCNSSNMAARSSTCVSQMQCVPFSNLEPQLEMQSHLEPPTERLVSETAKKVLCQRNWKADARKKK

A0A1S3CQ53 uncharacterized protein LOC103503545

1.1e-53

71.84

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Query:  MENLQNKQVSETESSFPIRLIDEGKEYRIDNDIMTRRLKNRERQRRYRARKRLQEEIRKASTMMKQPTQTGTYFQPNGVANNPLTRVHCSRNWKKEARKA
        ME++QN+ V           +D+ K  RIDNDIMTRRLKNRERQRRYRARKRL+EEI+KAS + KQP QTGTYFQPNG+ANNPLTRVHCSRNWKKEAR A
Subjt:  MENLQNKQVSETESSFPIRLIDEGKEYRIDNDIMTRRLKNRERQRRYRARKRLQEEIRKASTMMKQPTQTGTYFQPNGVANNPLTRVHCSRNWKKEARKA

Query:  NASRGL-EASCNSSNMAARSSTCVSQMQCVPFSNLEPQLEMQSHLEPPTERLVSETAKKVLCQRNWKADARKKK
        N SRG+ EASCNSSNMAAR+ST  SQ+QCVP SN++PQLE  SH + P ++LVSETAKKV  +RNWKADARKKK
Subjt:  NASRGL-EASCNSSNMAARSSTCVSQMQCVPFSNLEPQLEMQSHLEPPTERLVSETAKKVLCQRNWKADARKKK

A0A6J1DPD8 uncharacterized protein LOC111022965

7.0e-69

80.92

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Query:  MENLQNKQVSETESSFPIRLIDEGKEYRIDNDIMTRRLKNRERQRRYRARKRLQEEIRKASTMMKQPTQTGTYFQPNGVANNPLTRVHCSRNWKKEARKA
        MEN+QNKQV ET+ SFP++L+D+GK+YRIDNDIMTRRLKNRERQRRYRARKRL+EEI+KAST +KQPTQTGTYFQPNG+ANNPLTRVHC+RNWKK+AR  
Subjt:  MENLQNKQVSETESSFPIRLIDEGKEYRIDNDIMTRRLKNRERQRRYRARKRLQEEIRKASTMMKQPTQTGTYFQPNGVANNPLTRVHCSRNWKKEARKA

Query:  NASRGLEASCNSSNMAARSSTCVSQMQCVPFSNLEPQLEMQSHLEPPTERLVSETAKKVLCQRNWKADARKKK
        + SRGLEASCNSSNMAAR+ST  SQMQC+P SN EPQLE QSHLEPP E+L+S+TAKKVL +RNWKADARKKK
Subjt:  NASRGLEASCNSSNMAARSSTCVSQMQCVPFSNLEPQLEMQSHLEPPTERLVSETAKKVLCQRNWKADARKKK

A0A6J1HFL3 uncharacterized protein LOC111463869

1.4e-61

78.74

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Query:  MENLQNKQVSETESSFPIRLIDEGKEYRIDNDIMTRRLKNRERQRRYRARKRLQEEIRKASTMMKQPTQTGTYFQPNGVANNPLTRVHCSRNWKKEARKA
        ME +QNK V+E ESSFP++L D+ K  RIDNDIMTRRLKNRERQRRYRARKRL+EEI+KAST +K PTQTGTYFQPNGVANNPLTRVHCSRNWKKEAR A
Subjt:  MENLQNKQVSETESSFPIRLIDEGKEYRIDNDIMTRRLKNRERQRRYRARKRLQEEIRKASTMMKQPTQTGTYFQPNGVANNPLTRVHCSRNWKKEARKA

Query:  NASRGL-EASCNSSNMAARSSTCVSQMQCVPFSNLEPQLEMQSHLEPPTERLVSETAKKVLCQRNWKADARKKK
        + SRGL EASCNSSNMAA+SST   Q+QC P S+ EPQ E +SH EPPTE+LVSETAKKVL +RNWKADARKKK
Subjt:  NASRGL-EASCNSSNMAARSSTCVSQMQCVPFSNLEPQLEMQSHLEPPTERLVSETAKKVLCQRNWKADARKKK

A0A6J1HUC8 uncharacterized protein LOC111466937

3.7e-62

79.31

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Query:  MENLQNKQVSETESSFPIRLIDEGKEYRIDNDIMTRRLKNRERQRRYRARKRLQEEIRKASTMMKQPTQTGTYFQPNGVANNPLTRVHCSRNWKKEARKA
        ME +QNK V+E ESSFP++L D+ K  RIDNDIMTRRLKNRERQRRYRARKRL+EEI+KAST +K PTQTGTYFQPNGVANNPLTRVHCSRNWKKEAR A
Subjt:  MENLQNKQVSETESSFPIRLIDEGKEYRIDNDIMTRRLKNRERQRRYRARKRLQEEIRKASTMMKQPTQTGTYFQPNGVANNPLTRVHCSRNWKKEARKA

Query:  NASRGL-EASCNSSNMAARSSTCVSQMQCVPFSNLEPQLEMQSHLEPPTERLVSETAKKVLCQRNWKADARKKK
        + SRGL EASCNSSNMAA+SST   Q+QC P SN EPQ E +SH EPPTE+LVSETAKKVL +RNWKADARKKK
Subjt:  NASRGL-EASCNSSNMAARSSTCVSQMQCVPFSNLEPQLEMQSHLEPPTERLVSETAKKVLCQRNWKADARKKK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G32630.1 unknown protein

1.9e-10

48.11

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Query:  IDEGKEYRIDND-IMTRRLKNRERQRRYRARKRLQEEIR------KASTMMKQPTQ----TGTYFQ-PNGVANNPLTRVHCSRNWKKEARKAN--ASRGL
        IDE KE  ID D +M RR+KNRERQRRYRARKR++EE           TM KQ  +     G  F  P+G   N + RV+C RNWKKEAR+A+   ++  
Subjt:  IDEGKEYRIDND-IMTRRLKNRERQRRYRARKRLQEEIR------KASTMMKQPTQ----TGTYFQ-PNGVANNPLTRVHCSRNWKKEARKAN--ASRGL

Query:  EASCNS
        ++SC S
Subjt:  EASCNS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAAAATCTGCAAAATAAGCAGGTTTCTGAAACAGAAAGTAGTTTTCCAATTAGGCTCATAGATGAAGGAAAAGAATATAGAATAGATAATGACATAATGACTCGTCG
ACTGAAGAACCGAGAAAGGCAACGCAGATATAGAGCCCGGAAACGTCTACAGGAAGAAATCAGGAAGGCTTCGACCATGATGAAACAACCCACTCAGACTGGAACATATT
TTCAACCAAATGGCGTTGCTAACAATCCCTTGACTCGGGTTCATTGTAGCCGAAATTGGAAGAAGGAAGCAAGAAAAGCCAATGCATCTAGGGGGTTAGAAGCCTCTTGT
AATAGTTCCAACATGGCTGCAAGATCATCAACCTGTGTTAGTCAAATGCAGTGTGTGCCCTTCTCTAATCTCGAACCACAATTAGAAATGCAGTCACATTTGGAGCCTCC
TACCGAACGGCTCGTCTCCGAAACAGCAAAAAAGGTGCTTTGTCAAAGAAATTGGAAAGCAGATGCAAGAAAGAAGAAATTATTGATAGCATGA

mRNA sequence

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AATTATTGTTATTTGCGTATTTATTTAAACATTTTCAGTACCTAAACTCAATTAAGCTGTTTAAGATGAAGAGGAAAAAGAAAAGGGTATTTTTATTTCAGCAAATTCTC
CGATGAATCCGTGCGTCTGAAATCATACAACGTCTTTCTGGTCTTCCTCTCCGAAAAATAACCGATACAGATCCATTCATTTTCAAAGGTTTGTTGAATGTTTGCAAGTC
ATCTTCTTAATTGCATCTGAAACTTAAAGGTTGAGATATGGTGATGAAGCTGTGATTAGCATCTTTATTGCTTCACATTGAGATTCTGCCTTTGTCAAAATGGAAAATCT
GCAAAATAAGCAGGTTTCTGAAACAGAAAGTAGTTTTCCAATTAGGCTCATAGATGAAGGAAAAGAATATAGAATAGATAATGACATAATGACTCGTCGACTGAAGAACC
GAGAAAGGCAACGCAGATATAGAGCCCGGAAACGTCTACAGGAAGAAATCAGGAAGGCTTCGACCATGATGAAACAACCCACTCAGACTGGAACATATTTTCAACCAAAT
GGCGTTGCTAACAATCCCTTGACTCGGGTTCATTGTAGCCGAAATTGGAAGAAGGAAGCAAGAAAAGCCAATGCATCTAGGGGGTTAGAAGCCTCTTGTAATAGTTCCAA
CATGGCTGCAAGATCATCAACCTGTGTTAGTCAAATGCAGTGTGTGCCCTTCTCTAATCTCGAACCACAATTAGAAATGCAGTCACATTTGGAGCCTCCTACCGAACGGC
TCGTCTCCGAAACAGCAAAAAAGGTGCTTTGTCAAAGAAATTGGAAAGCAGATGCAAGAAAGAAGAAATTATTGATAGCATGAAAGATATTATTCTTATCATCTCAGTGT
GATTTCAATTTTGGAACTAATGCTCAACCAATGACAAGGGCACCCTTTGAAGGATTTTTACAGGAAGCTGAACAGTTTTTGTAATGAATAGACTGGGGTTGAGAAACAGG
CTAGAGCTCTCCCGGGTCGAAGGCGATCAGATTCGTTTTCAAATGTTTGTAAGTTTTTTTCTTTACTACTTTGTTGAGAGTCATTGAGTATGAATACTTGAGATGTAGAT
AAATACAGGTTTAAGCCTGGAGTATATCCCTGTTGAATATGAATATCCCAGAT

Protein sequence

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MENLQNKQVSETESSFPIRLIDEGKEYRIDNDIMTRRLKNRERQRRYRARKRLQEEIRKASTMMKQPTQTGTYFQPNGVANNPLTRVHCSRNWKKEARKANASRGLEASC
NSSNMAARSSTCVSQMQCVPFSNLEPQLEMQSHLEPPTERLVSETAKKVLCQRNWKADARKKKLLIA

Sed0024146 (gene) of Chayote v1 genome