; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0024156 (gene) of Chayote v1 genome

Gene IDSed0024156
OrganismSechium edule (Chayote v1)
Descriptionreplication protein A 32 kDa subunit A-like
Genome locationLG05:30397298..30402968
RNA-Seq ExpressionSed0024156
SyntenySed0024156
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006260 - DNA replication (biological process)
GO:0006289 - nucleotide-excision repair (biological process)
GO:0000781 - chromosome, telomeric region (cellular component)
GO:0005662 - DNA replication factor A complex (cellular component)
GO:0035861 - site of double-strand break (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR004365 - OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR012340 - Nucleic acid-binding, OB-fold
IPR014646 - Replication factor A protein 2
IPR014892 - Replication protein A, C-terminal
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily
IPR040260 - Replication factor A protein-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591621.1 Replication protein A 32 kDa subunit A, partial [Cucurbita argyrosperma subsp. sororia]2.2e-13290.41Show/hide
Query:  MFSSSQFDSGSGFTSSQSNDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFTSSQ+ DSSSAK+RETPGLVP TVKQISEAS SGEEKANF INGVDITNVT+VGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQSNDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGLTQFQSSDSIVKTPVKNGSSGYQTASTGLLSEQ
        DTKQMDEIQDGMY+RVNG+LK  QSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQ  NGVG TQFQSSDSIVKTP++NGSSGYQTAS+ L SEQ
Subjt:  DTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGLTQFQSSDSIVKTPVKNGSSGYQTASTGLLSEQ

Query:  HTVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKKNCD+L+LDYLQLPSS+AKERGIHRDELSQQLKIP+EKILNSIRSLEDEGLIYST+DEFHFKSAA
Subjt:  HTVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

KAG7024504.1 Replication protein A 32 kDa subunit A [Cucurbita argyrosperma subsp. argyrosperma]1.7e-13290.77Show/hide
Query:  MFSSSQFDSGSGFTSSQSNDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFTSSQ+ DSSSAK+RETPGLVP TVKQISEAS SGEEKANF INGVDITNVT+VGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQSNDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGLTQFQSSDSIVKTPVKNGSSGYQTASTGLLSEQ
        DTKQMDEIQDGMY+RVNG+LK  QSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQ  NGVG TQFQSSDSIVKTP++NGSSGYQTAS+ L SEQ
Subjt:  DTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGLTQFQSSDSIVKTPVKNGSSGYQTASTGLLSEQ

Query:  HTVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKKNCD+L+LDYLQLPSS+AKERGIHRDELSQQLKIP+EKILNSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

XP_022936562.1 replication protein A 32 kDa subunit A-like [Cucurbita moschata]6.7e-13491.51Show/hide
Query:  MFSSSQFDSGSGFTSSQSNDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFTSSQ+NDSSSAK+RETPGLVP TVKQISEAS SGEEKANFVINGVDITNVT+VGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQSNDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGLTQFQSSDSIVKTPVKNGSSGYQTASTGLLSEQ
        DTKQMDEIQDGMY+RVNG+LK  QSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQ  NGVG TQFQSSDSIVKTP++NGSSGYQTAS+ L SEQ
Subjt:  DTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGLTQFQSSDSIVKTPVKNGSSGYQTASTGLLSEQ

Query:  HTVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKKNCD+L+LDYLQLPSS+AKERGIHRDELSQQLKIP+EKILNSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

XP_022976184.1 replication protein A 32 kDa subunit A-like [Cucurbita maxima]3.1e-13190.11Show/hide
Query:  MFSSSQFDSGSGFTSSQSNDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFT SQ+NDSSSAK+RETPGLVP TVKQISEAS SGEEKANF INGVDITNVT+VGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQSNDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGLTQFQSSDSIVKTPVKNGSSGYQTAS--TGLLS
        DTKQMDEIQDGMY+RVNG+LK  QSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQ  NGVG TQFQSSDSIVKTP++NGSSGYQTAS  + L S
Subjt:  DTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGLTQFQSSDSIVKTPVKNGSSGYQTAS--TGLLS

Query:  EQHTVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        EQHTVDVKKNCD+L+LDYLQLPSS+AKERGIHRDELSQQLKIP+EKILNSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  EQHTVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

XP_023524340.1 replication protein A 32 kDa subunit A-like [Cucurbita pepo subsp. pepo]3.1e-13190.74Show/hide
Query:  MFSSSQFDSGSGFTSSQSNDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFTSSQ+NDSS +KSRETPG+VPVTVKQISEAS SGEEKANFVINGVDITNVT+VGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQSNDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGLTQFQSSDSIVKTPVKNGSSGYQTASTGLLSEQH
        DTKQMDEIQDGMYVRV G+LK  QSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNG   TQFQSSDS VK  V++GSSGYQTAS+GL S+QH
Subjt:  DTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGLTQFQSSDSIVKTPVKNGSSGYQTASTGLLSEQH

Query:  TVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        TVDVKKNCDELVLDYLQLPSS+AKERGIHRDELSQQLKIPLEKI++SIRSLEDEGLIYSTIDE+HFKSAA
Subjt:  TVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

TrEMBL top hitse value%identityAlignment
A0A0A0LEG7 Uncharacterized protein5.0e-12787.08Show/hide
Query:  MFSSSQFDSGSGFTSSQSNDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSS+QFDS SGFTSSQ+NDSSSAKSRE+PGL+PVTVKQISEAS SGEEKANFVINGVDITNVT+VGKVSEKAERNTDITF VDDGTG IGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQSNDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGLTQFQSSDSIVKTPVKNGSSGYQTASTGLLSEQ
        DT QM+EIQDGMYVRVNG+LK  QSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQ   G G TQ Q+SDSIVKTPV+NGS+GY T S+ + SEQ
Subjt:  DTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGLTQFQSSDSIVKTPVKNGSSGYQTASTGLLSEQ

Query:  HTVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKK+CDELVLDYLQLPSS+AKERGIH+DELSQQLK+P+EKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

A0A1S3CR64 replication protein A 32 kDa subunit A-like2.7e-12888.56Show/hide
Query:  MFSSSQFDSGSGFTSSQSNDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSS+QFDSGSGFTSSQ+NDSSSAKSRE+PGLVPVTVKQISEAS SGEEKANFVIN VDITNVT+VGKVSEKAERNTDITF VDDGTG IGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQSNDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGLTQFQSSDSIVKTPVKNGSSGYQTASTGLLSEQ
        DTKQM+EIQDGMYVRVNG+LK  QSNKQIFAFSVRPVTNFDEITFHF+ECIHDHLRNSKLQ   G G TQ Q+SDSIVKTPV+NGSSGY T S+ + SEQ
Subjt:  DTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGLTQFQSSDSIVKTPVKNGSSGYQTASTGLLSEQ

Query:  HTVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKK+CDELVLDYLQLPSS+AKERGIHRDELSQQLKIP+EKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

A0A6J1CUB8 replication protein A 32 kDa subunit A1.5e-12386.67Show/hide
Query:  MFSSSQFDSGSGFTSSQSNDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFTSSQ  DS+SAKSRE+PGLVPVTVKQISEA  SGEEKANFVINGVDITNVT+VGKVSEKAERNTDITF+VDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQSNDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGLTQFQSSDSIVKTPVKNGSSGYQTASTGLLSEQH
        DTKQMD+IQDGMY+RVNG+LK  Q N QIFAFSVRPVTN DEITFHFIECIHD+LRNSKLQ NGV  TQ QSSDS V   V++GSSGYQTAS+ L S QH
Subjt:  DTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGLTQFQSSDSIVKTPVKNGSSGYQTASTGLLSEQH

Query:  TVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        TVDVKKN D+LVLDYLQLPSS+AKE+GIHRDELSQQLKIPLEKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  TVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

A0A6J1F8S8 replication protein A 32 kDa subunit A-like3.2e-13491.51Show/hide
Query:  MFSSSQFDSGSGFTSSQSNDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFTSSQ+NDSSSAK+RETPGLVP TVKQISEAS SGEEKANFVINGVDITNVT+VGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQSNDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGLTQFQSSDSIVKTPVKNGSSGYQTASTGLLSEQ
        DTKQMDEIQDGMY+RVNG+LK  QSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQ  NGVG TQFQSSDSIVKTP++NGSSGYQTAS+ L SEQ
Subjt:  DTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGLTQFQSSDSIVKTPVKNGSSGYQTASTGLLSEQ

Query:  HTVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKKNCD+L+LDYLQLPSS+AKERGIHRDELSQQLKIP+EKILNSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

A0A6J1IMU1 replication protein A 32 kDa subunit A-like1.5e-13190.11Show/hide
Query:  MFSSSQFDSGSGFTSSQSNDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFT SQ+NDSSSAK+RETPGLVP TVKQISEAS SGEEKANF INGVDITNVT+VGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQSNDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGLTQFQSSDSIVKTPVKNGSSGYQTAS--TGLLS
        DTKQMDEIQDGMY+RVNG+LK  QSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQ  NGVG TQFQSSDSIVKTP++NGSSGYQTAS  + L S
Subjt:  DTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGVGLTQFQSSDSIVKTPVKNGSSGYQTAS--TGLLS

Query:  EQHTVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        EQHTVDVKKNCD+L+LDYLQLPSS+AKERGIHRDELSQQLKIP+EKILNSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  EQHTVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

SwissProt top hitse value%identityAlignment
Q5Z8L1 Replication protein A 32 kDa subunit C4.5e-2434.6Show/hide
Query:  SGSGFTSSQSNDSSSAKSRETPGLVPVTVKQISEA-----SQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTK
        S +G  ++ +   S  +     G VP TV  IS +     +  G     F I+GV+ TNV V+G+V     R+TD+ F +DD TG+I   RW+ D  DT+
Subjt:  SGSGFTSSQSNDSSSAKSRETPGLVPVTVKQISEA-----SQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTK

Query:  QMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRN--SKLQPNGVGLTQFQSSDSIVKTPVKNGSSGYQTASTGLLSEQHT
            IQ+G+YV+V  NL   Q+ KQ  A S+RP+ NF+E+  HFIEC+H HL +  SK+Q     L     ++     P   G   YQ   T  +++   
Subjt:  QMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRN--SKLQPNGVGLTQFQSSDSIVKTPVKNGSSGYQTASTGLLSEQHT

Query:  VDVKKNCDELV
          V+ N    V
Subjt:  VDVKKNCDELV

Q6H7J5 Replication protein A 32 kDa subunit B4.3e-4337.18Show/hide
Query:  SSSQFDSGSGFTSSQSNDSSSA---------KSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCK
        ++S    G GF  SQ+ +++           KSR    L+P+TVKQI +ASQ+ ++K+NF +NG++++ V +VG++  K +R TD++F +DDGTGR+   
Subjt:  SSSQFDSGSGFTSSQSNDSSSA---------KSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCK

Query:  RWVNDTFDTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLR--NSKLQPNGVGLTQFQSSDSIVKTPVKNGSSGYQTA
        RW ND+ DTK+M +IQ+G YV VNG LK  Q  +Q+ A+SVR +TNF+++T HF+ C+H HL     K Q N    T   +      +   N S     A
Subjt:  RWVNDTFDTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLR--NSKLQPNGVGLTQFQSSDSIVKTPVKNGSSGYQTA

Query:  STGLLSEQHTVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKS
        ST   S         N  +LVL+    P+ +  + G+  D +S++L +P E +   I    D G +Y+TID+ H+KS
Subjt:  STGLLSEQHTVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKS

Q6K9U2 Replication protein A 32 kDa subunit A4.5e-4843.06Show/hide
Query:  MFSSSQFD--SGSGFTSSQ---SNDSSSAKSRETPGLVPVTVKQISEASQS---GEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGC
        M S SQ D  S S FTSSQ   ++ ++ +KSR     +P+TVKQISEA QS   GE+ A FV++GV+  NV +VG VS K ERNTD++F +DDGTGR+  
Subjt:  MFSSSQFD--SGSGFTSSQ---SNDSSSAKSRETPGLVPVTVKQISEASQS---GEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGC

Query:  KRWVNDTFDTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGLTQFQSSDSIVKTPVKNGSSGYQTAS
         RWVND  D+ +   +Q+GMYV V G+LK LQ  K+  AF++RPVT+++E+T HFI+C+  HL N+K Q      T      S + +   NG S   T +
Subjt:  KRWVNDTFDTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGLTQFQSSDSIVKTPVKNGSSGYQTAS

Query:  TGLLSEQHTVDV----KKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSA
        +   +    + V    K + +  VL+  + P+++  E G+H DE+ ++ ++P  KI  +I  L D G IYSTIDE H+KSA
Subjt:  TGLLSEQHTVDV----KKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSA

Q8LFJ8 Replication protein A 32 kDa subunit B1.4e-4640Show/hide
Query:  FSSSQFDSGSGFTSSQS-----NDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCKRWV
        F  +   +G GF  SQ+       SSS K+R+   L+P+T+KQ+S AS +GE  +NF I+GVDI  V +VG++S    R T + F+VDDGTG + C RW 
Subjt:  FSSSQFDSGSGFTSSQS-----NDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCKRWV

Query:  NDTFDTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGLTQF------QSSDSIVKTPVKNGSSGYQT
        +   +T++M+ ++ GMYVR++G+LK  Q  + +  FSVRPVT+F+EI  HF EC++ H+ N+KL+  G  +TQ       Q   S + TP K     YQT
Subjt:  NDTFDTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGLTQF------QSSDSIVKTPVKNGSSGYQT

Query:  ASTGLLSEQHTVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
          +     Q   D      + VL+YL  P  I  E G+H D ++++L+IPL ++  ++  L ++G IYST+DE  FKS A
Subjt:  ASTGLLSEQHTVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

Q9ZQ19 Replication protein A 32 kDa subunit A3.6e-6649.47Show/hide
Query:  MFSSSQFD-----SGSGFTSSQ-----SNDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAE-RNTDITFIVDDGTGR
        MFSSSQF+     SG GF SSQ      + SS+AK+R+  GLVPVTVKQI+E  QS  EK+  VING+ +TNV++VG V +K E + T++ F +DDGTGR
Subjt:  MFSSSQFD-----SGSGFTSSQ-----SNDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAE-RNTDITFIVDDGTGR

Query:  IGCKRWVNDTFDTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVG-LTQFQSSDSIVKTPVKNGSSGY
        I CKRWV++TFD ++M+ ++DG YVR++G+LKT Q   Q+  FSVRP+ +F+E+TFH+IECIH + +NS+ Q   VG +TQ       V T  + GS+  
Subjt:  IGCKRWVNDTFDTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVG-LTQFQSSDSIVKTPVKNGSSGY

Query:  QTA--STGLLSEQHTVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFK
        Q    +  + S+ +  + +KN D+++LDYL+ P+  A+++GIH DE++QQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Subjt:  QTA--STGLLSEQHTVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFK

Arabidopsis top hitse value%identityAlignment
AT2G24490.1 replicon protein A22.6e-6749.47Show/hide
Query:  MFSSSQFD-----SGSGFTSSQ-----SNDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAE-RNTDITFIVDDGTGR
        MFSSSQF+     SG GF SSQ      + SS+AK+R+  GLVPVTVKQI+E  QS  EK+  VING+ +TNV++VG V +K E + T++ F +DDGTGR
Subjt:  MFSSSQFD-----SGSGFTSSQ-----SNDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAE-RNTDITFIVDDGTGR

Query:  IGCKRWVNDTFDTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVG-LTQFQSSDSIVKTPVKNGSSGY
        I CKRWV++TFD ++M+ ++DG YVR++G+LKT Q   Q+  FSVRP+ +F+E+TFH+IECIH + +NS+ Q   VG +TQ       V T  + GS+  
Subjt:  IGCKRWVNDTFDTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVG-LTQFQSSDSIVKTPVKNGSSGY

Query:  QTA--STGLLSEQHTVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFK
        Q    +  + S+ +  + +KN D+++LDYL+ P+  A+++GIH DE++QQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Subjt:  QTA--STGLLSEQHTVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFK

AT2G24490.2 replicon protein A22.6e-6749.47Show/hide
Query:  MFSSSQFD-----SGSGFTSSQ-----SNDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAE-RNTDITFIVDDGTGR
        MFSSSQF+     SG GF SSQ      + SS+AK+R+  GLVPVTVKQI+E  QS  EK+  VING+ +TNV++VG V +K E + T++ F +DDGTGR
Subjt:  MFSSSQFD-----SGSGFTSSQ-----SNDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAE-RNTDITFIVDDGTGR

Query:  IGCKRWVNDTFDTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVG-LTQFQSSDSIVKTPVKNGSSGY
        I CKRWV++TFD ++M+ ++DG YVR++G+LKT Q   Q+  FSVRP+ +F+E+TFH+IECIH + +NS+ Q   VG +TQ       V T  + GS+  
Subjt:  IGCKRWVNDTFDTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVG-LTQFQSSDSIVKTPVKNGSSGY

Query:  QTA--STGLLSEQHTVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFK
        Q    +  + S+ +  + +KN D+++LDYL+ P+  A+++GIH DE++QQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Subjt:  QTA--STGLLSEQHTVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFK

AT3G02920.1 Replication protein A, subunit RPA321.0e-4740Show/hide
Query:  FSSSQFDSGSGFTSSQS-----NDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCKRWV
        F  +   +G GF  SQ+       SSS K+R+   L+P+T+KQ+S AS +GE  +NF I+GVDI  V +VG++S    R T + F+VDDGTG + C RW 
Subjt:  FSSSQFDSGSGFTSSQS-----NDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCKRWV

Query:  NDTFDTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGLTQF------QSSDSIVKTPVKNGSSGYQT
        +   +T++M+ ++ GMYVR++G+LK  Q  + +  FSVRPVT+F+EI  HF EC++ H+ N+KL+  G  +TQ       Q   S + TP K     YQT
Subjt:  NDTFDTKQMDEIQDGMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGLTQF------QSSDSIVKTPVKNGSSGYQT

Query:  ASTGLLSEQHTVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
          +     Q   D      + VL+YL  P  I  E G+H D ++++L+IPL ++  ++  L ++G IYST+DE  FKS A
Subjt:  ASTGLLSEQHTVDVKKNCDELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

AT3G02920.2 Replication protein A, subunit RPA326.6e-4740.46Show/hide
Query:  SSQSNDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYV
        S  S   SS ++R+   L+P+T+KQ+S AS +GE  +NF I+GVDI  V +VG++S    R T + F+VDDGTG + C RW +   +T++M+ ++ GMYV
Subjt:  SSQSNDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYV

Query:  RVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGLTQF------QSSDSIVKTPVKNGSSGYQTASTGLLSEQHTVDVKKNC
        R++G+LK  Q  + +  FSVRPVT+F+EI  HF EC++ H+ N+KL+  G  +TQ       Q   S + TP K     YQT  +     Q   D     
Subjt:  RVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGLTQF------QSSDSIVKTPVKNGSSGYQTASTGLLSEQHTVDVKKNC

Query:  DELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
         + VL+YL  P  I  E G+H D ++++L+IPL ++  ++  L ++G IYST+DE  FKS A
Subjt:  DELVLDYLQLPSSIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTCTAGCAGCCAGTTTGATTCCGGCAGTGGATTTACGTCCTCTCAGTCCAATGACTCCTCTTCGGCGAAGAGTCGTGAAACCCCGGGTTTGGTTCCAGTAACTGT
AAAACAGATAAGTGAAGCTTCCCAATCTGGTGAAGAGAAGGCCAACTTTGTAATCAATGGCGTTGACATTACAAATGTTACGGTTGTCGGGAAGGTCTCTGAGAAAGCTG
AAAGGAATACTGACATCACATTCATTGTAGACGATGGAACAGGAAGAATAGGCTGCAAAAGATGGGTAAACGACACTTTTGACACCAAGCAAATGGATGAAATACAGGAT
GGAATGTATGTACGGGTGAATGGGAATTTGAAAACACTTCAAAGTAACAAGCAAATATTTGCATTCTCTGTAAGGCCTGTTACAAATTTTGATGAAATCACCTTCCACTT
TATTGAATGCATACATGACCACTTGCGGAATTCCAAGTTACAGCCCAATGGAGTTGGATTGACACAGTTCCAGTCCTCTGATTCAATTGTGAAGACTCCAGTGAAGAATG
GCTCGAGTGGATATCAGACAGCATCTACAGGGCTTCTGTCTGAGCAGCACACTGTTGATGTTAAAAAGAATTGTGACGAATTAGTCCTCGACTATCTCCAGTTGCCCTCG
AGCATTGCAAAAGAAAGAGGAATACACAGAGATGAGCTTTCCCAGCAGCTGAAAATTCCTTTGGAGAAAATACTGAACTCCATAAGGTCTCTTGAAGATGAAGGTTTGAT
ATATTCCACCATAGATGAGTTTCATTTCAAATCTGCTGCATAG
mRNA sequenceShow/hide mRNA sequence
ATTCTTTCGCATTTCTCTCCATTGTTGGCTGTCCATCGAGTTCTTCAGAGTTTCGAAGAATGTTTTCTAGCAGCCAGTTTGATTCCGGCAGTGGATTTACGTCCTCTCAG
TCCAATGACTCCTCTTCGGCGAAGAGTCGTGAAACCCCGGGTTTGGTTCCAGTAACTGTAAAACAGATAAGTGAAGCTTCCCAATCTGGTGAAGAGAAGGCCAACTTTGT
AATCAATGGCGTTGACATTACAAATGTTACGGTTGTCGGGAAGGTCTCTGAGAAAGCTGAAAGGAATACTGACATCACATTCATTGTAGACGATGGAACAGGAAGAATAG
GCTGCAAAAGATGGGTAAACGACACTTTTGACACCAAGCAAATGGATGAAATACAGGATGGAATGTATGTACGGGTGAATGGGAATTTGAAAACACTTCAAAGTAACAAG
CAAATATTTGCATTCTCTGTAAGGCCTGTTACAAATTTTGATGAAATCACCTTCCACTTTATTGAATGCATACATGACCACTTGCGGAATTCCAAGTTACAGCCCAATGG
AGTTGGATTGACACAGTTCCAGTCCTCTGATTCAATTGTGAAGACTCCAGTGAAGAATGGCTCGAGTGGATATCAGACAGCATCTACAGGGCTTCTGTCTGAGCAGCACA
CTGTTGATGTTAAAAAGAATTGTGACGAATTAGTCCTCGACTATCTCCAGTTGCCCTCGAGCATTGCAAAAGAAAGAGGAATACACAGAGATGAGCTTTCCCAGCAGCTG
AAAATTCCTTTGGAGAAAATACTGAACTCCATAAGGTCTCTTGAAGATGAAGGTTTGATATATTCCACCATAGATGAGTTTCATTTCAAATCTGCTGCATAGAATTCATA
ATTTTATAGTTTTTTCTTTTCTTATAATATTAATTTCACTATGCATTTTATATGGTTGGACTAACTTTAGTAGCTTGAAATAAGATTTATTTCCTGCCTTGCTTTGAACC
TCAAAAAGATTCGTGTATATGTATTTTGAGGCTTTTGTTTTTCCAAATTTCCAAGATAGATCTGCAATTTTCTAGGGGTGAAATGAAAAGACCAACAATTTCCAAATTAA
TACCC
Protein sequenceShow/hide protein sequence
MFSSSQFDSGSGFTSSQSNDSSSAKSRETPGLVPVTVKQISEASQSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQD
GMYVRVNGNLKTLQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGVGLTQFQSSDSIVKTPVKNGSSGYQTASTGLLSEQHTVDVKKNCDELVLDYLQLPS
SIAKERGIHRDELSQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA