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Sed0024174 (gene) of Chayote v1 genome

Gene IDSed0024174
OrganismSechium edule (Chayote v1)
DescriptionProtein of unknown function (DUF3511)
Genome locationLG10:34096329..34096940
RNA-Seq ExpressionSed0024174
SyntenySed0024174
Gene Ontology termsNA
InterPro domainsIPR021899 - Protein of unknown function DUF3511


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039168.1 Mediator of RNA polymerase II transcription subunit 8 [Cucumis melo var. makuwa]1.1e-3289.66Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSASYNFNGPTEKGSGFSSSAEAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTKFSDSRYGL
        MEKSKSFPKYSSSTSGEFGFQTRS SYNFNGPT K +GFS+SA+ ELQRKRRIASYNVFNMENKVKS VKNSFKWIKTKFSD RYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSASYNFNGPTEKGSGFSSSAEAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTKFSDSRYGL

KAG6607585.1 hypothetical protein SDJN03_00927, partial [Cucurbita argyrosperma subsp. sororia]2.4e-3288.51Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSASYNFNGPTEKGSGFSSSAEAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTKFSDSRYGL
        MEKSK+FPKYSSSTSGEFGF+T+S SYNFNG  EKGSGFSSSA+ ELQRKRRIASYNVFNMENKVKS VKNSFKWIKTKFSD RYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSASYNFNGPTEKGSGFSSSAEAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTKFSDSRYGL

KAG7037209.1 hypothetical protein SDJN02_00832, partial [Cucurbita argyrosperma subsp. argyrosperma]9.0e-3287.36Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSASYNFNGPTEKGSGFSSSAEAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTKFSDSRYGL
        MEK K+FPKYSSSTSGEFGF+T+S SYNFNG  EKGSGFSSSA+ ELQRKRRIASYNVFNMENKVKS VKNSFKWIKTKFSD RYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSASYNFNGPTEKGSGFSSSAEAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTKFSDSRYGL

KGN45893.1 hypothetical protein Csa_005289 [Cucumis sativus]8.2e-3389.66Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSASYNFNGPTEKGSGFSSSAEAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTKFSDSRYGL
        MEKSKSFPKYSSSTSGEFGFQTRS SYNFNGPT K +GFS+SA+ ELQRKRRIASYNVFNMENKVKS VKNSFKWIKTKFSD RYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSASYNFNGPTEKGSGFSSSAEAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTKFSDSRYGL

XP_022930185.1 uncharacterized protein LOC111436683 [Cucurbita moschata]5.9e-3186.21Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSASYNFNGPTEKGSGFSSSAEAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTKFSDSRYGL
        MEKSKSFPKYSSS SGEF FQTRS SYNFNGPT K +GFS+S + ELQRKRRIASYNVFNMENKVKS VKNSFKWIKTKFSD RYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSASYNFNGPTEKGSGFSSSAEAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTKFSDSRYGL

TrEMBL top hitse value%identityAlignment
A0A0A0K8Y3 Uncharacterized protein4.0e-3389.66Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSASYNFNGPTEKGSGFSSSAEAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTKFSDSRYGL
        MEKSKSFPKYSSSTSGEFGFQTRS SYNFNGPT K +GFS+SA+ ELQRKRRIASYNVFNMENKVKS VKNSFKWIKTKFSD RYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSASYNFNGPTEKGSGFSSSAEAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTKFSDSRYGL

A0A5A7T8F8 Mediator of RNA polymerase II transcription subunit 85.2e-3389.66Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSASYNFNGPTEKGSGFSSSAEAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTKFSDSRYGL
        MEKSKSFPKYSSSTSGEFGFQTRS SYNFNGPT K +GFS+SA+ ELQRKRRIASYNVFNMENKVKS VKNSFKWIKTKFSD RYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSASYNFNGPTEKGSGFSSSAEAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTKFSDSRYGL

A0A6J1EWA0 uncharacterized protein LOC1114366832.8e-3186.21Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSASYNFNGPTEKGSGFSSSAEAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTKFSDSRYGL
        MEKSKSFPKYSSS SGEF FQTRS SYNFNGPT K +GFS+S + ELQRKRRIASYNVFNMENKVKS VKNSFKWIKTKFSD RYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSASYNFNGPTEKGSGFSSSAEAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTKFSDSRYGL

A0A6J1ICY9 uncharacterized protein LOC1114726831.6e-2983.91Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSASYNFNGPTEKGSGFSSSAEAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTKFSDSRYGL
        MEKSKSFPKYSSS SGEF FQTRS SYNFNGPT   +GFS+S + ELQRKRRIASYNVFNMENKVKS VKNSFKWIKTKFSD RY L
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSASYNFNGPTEKGSGFSSSAEAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTKFSDSRYGL

B9H7V5 Uncharacterized protein5.5e-2773.56Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSASYNFNGPTEKGSGFSSSAEAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTKFSDSRYGL
        MEKSKSFP+YSSS SGEFGF+ RS SYNFNGP +KG+GF++S++ EL+RK+RIASYNVF ME K+KS V+NSFKWIK+KFSD RYG+
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSASYNFNGPTEKGSGFSSSAEAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTKFSDSRYGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G72720.1 Protein of unknown function (DUF3511)5.7e-0841Show/hide
Query:  EKSKSFP----------KYSSSTSGEFGFQT--RSASYNFNGPTE--KGSGFSSSAEAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTKFSDSRYGL
        EKS+S P           YS+ST   +   T  R  S N +  +   K  GF    EAE+QRK+R+ASYNV+ +E +VK  +K SFKW K   S++ YGL
Subjt:  EKSKSFP----------KYSSSTSGEFGFQT--RSASYNFNGPTE--KGSGFSSSAEAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTKFSDSRYGL

AT2G47480.1 Protein of unknown function (DUF3511)9.1e-0654.05Show/hide
Query:  AEAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTK
        ++AE++RK+RIA Y  + +E KVKS +KN F+WIK K
Subjt:  AEAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTK

AT3G62640.1 Protein of unknown function (DUF3511)2.6e-0548.84Show/hide
Query:  EAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTKFSDSRYG
        +AE +RK+RIA+Y  + +E KVKS VK  F WIK ++S   +G
Subjt:  EAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTKFSDSRYG

AT4G09890.1 Protein of unknown function (DUF3511)3.1e-1454.22Show/hide
Query:  MEKSKSFPKYSSS-TSGEFGF-QTRSASYNFNGPTEKGSGFSSSAEAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTKFS
        M+ SKS+ +YSSS ++ EFG+ Q RS SYNFNGP         + + E++RK+R+ASYN+F  E K+KS +KNSFKWIK KFS
Subjt:  MEKSKSFPKYSSS-TSGEFGF-QTRSASYNFNGPTEKGSGFSSSAEAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTKFS

AT5G11970.1 Protein of unknown function (DUF3511)9.1e-0636.05Show/hide
Query:  YSSSTSGEFGFQTRSASYN------FNGPTEKGSGFSSS---AEAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTKFSDSRYG
        Y  +  G+  F++ SASY       ++   EK    S S    + ELQRK+R+ASY ++ +E KVK   +NSF+W+K +++   YG
Subjt:  YSSSTSGEFGFQTRSASYN------FNGPTEKGSGFSSS---AEAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTKFSDSRYG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAGCAAATCATTCCCCAAGTACTCGTCCTCGACTTCAGGCGAGTTCGGTTTCCAAACCCGATCAGCCTCGTACAATTTCAATGGCCCGACCGAGAAGGGGAG
CGGGTTTTCGTCCTCGGCCGAGGCGGAGCTCCAGCGGAAGAGAAGAATTGCCTCTTATAATGTTTTCAACATGGAAAACAAGGTCAAGTCCAGAGTAAAGAACAGCTTCA
AGTGGATCAAAACCAAGTTTAGTGACAGTCGCTATGGTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATCAGATCTTGCTGATCACTATCATGATCATTTTCCTTCAATCTCCACCGTCCATTTTCTCCATCTATTCTATATAAAAACCCTCCAATCAAAACCCAACTCCAAATTTA
ATTTGGTAGTGAGAAGAGAAGGAGAAAACAAGAGAAGCTACAAGCTATGGAGAAGAGCAAATCATTCCCCAAGTACTCGTCCTCGACTTCAGGCGAGTTCGGTTTCCAAA
CCCGATCAGCCTCGTACAATTTCAATGGCCCGACCGAGAAGGGGAGCGGGTTTTCGTCCTCGGCCGAGGCGGAGCTCCAGCGGAAGAGAAGAATTGCCTCTTATAATGTT
TTCAACATGGAAAACAAGGTCAAGTCCAGAGTAAAGAACAGCTTCAAGTGGATCAAAACCAAGTTTAGTGACAGTCGCTATGGTTTGTGAATTTATTAATAATTAAGGGG
TTTTGTTTTTTTTTCTTCTTCTTCTATGTGTAAACAATTTGGCATTTACTGTCTCCAAAGACTTGGAACCAAATTGAAAATATGTTTGTGCTTGGCTGTGCTTTTGTTCC
CCATGCAAATATATAAAACTTTGTTTAGAAAAAAAATTCAACTACCACAAATTTTAGTGTTA
Protein sequenceShow/hide protein sequence
MEKSKSFPKYSSSTSGEFGFQTRSASYNFNGPTEKGSGFSSSAEAELQRKRRIASYNVFNMENKVKSRVKNSFKWIKTKFSDSRYGL