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Sed0024179 (gene) of Chayote v1 genome

Gene IDSed0024179
OrganismSechium edule (Chayote v1)
Descriptioncalmodulin-like
Genome locationLG02:3901553..3902160
RNA-Seq ExpressionSed0024179
SyntenySed0024179
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022951134.1 uncharacterized protein LOC111454074 isoform X1 [Cucurbita moschata]2.1e-3250.9Show/hide
Query:  AQYEAIKLIRKNDRDKDGLYIPSS-QASVEFGKGEF---GKERTPSRIPKANNKILPKLGSNPLIKLKDQLEGKTKNSSTRVL----LEMPLSREQMKQI
        A+ EA +L++K D + DG+      Q  +   +G       +   S+IPKA+N +  K  SN  +K K Q++ K K SST+ L     ++ LSREQMK+I
Subjt:  AQYEAIKLIRKNDRDKDGLYIPSS-QASVEFGKGEF---GKERTPSRIPKANNKILPKLGSNPLIKLKDQLEGKTKNSSTRVL----LEMPLSREQMKQI

Query:  FKQHDSNNDGFLNIWEITKVFAFLGSIIPFNKAHYGLALADANKDGLISEVELDQLIDYASKVMKKK
        FK HDSN DGFL+I E+TK F+FLGSI+PFNKAHY +A AD N DGLISE ELD+LIDYASK + KK
Subjt:  FKQHDSNNDGFLNIWEITKVFAFLGSIIPFNKAHYGLALADANKDGLISEVELDQLIDYASKVMKKK

XP_022951799.1 probable calcium-binding protein CML11 [Cucurbita moschata]2.3e-3149.7Show/hide
Query:  SFAQYEAIKLIRKNDRDKDGLYIPSSQASVEF----GKGEFGKERTPSRIPKANNKILPKLGSNPLIKLKDQLEGKTKNSSTRVLLE----MPLSREQMK
        ++A+ EA +L++K DR+ DG+ +   +  V      G  +   +   S+IPK N+K   +L SN     K Q++GK   SST+VL E    +PLSREQ+K
Subjt:  SFAQYEAIKLIRKNDRDKDGLYIPSSQASVEF----GKGEFGKERTPSRIPKANNKILPKLGSNPLIKLKDQLEGKTKNSSTRVLLE----MPLSREQMK

Query:  QIFKQHDSNNDGFLNIWEITKVFAFLGSIIPFNKAHYGLALADANKDGLISEVELDQLIDYASKVMKKK
        +IFK +DS+ DGFLNI E+TK F+FLGSI PF KA Y +  ADAN DGLISEVEL++LIDYA K++KKK
Subjt:  QIFKQHDSNNDGFLNIWEITKVFAFLGSIIPFNKAHYGLALADANKDGLISEVELDQLIDYASKVMKKK

XP_023002688.1 calcium-binding protein H-like isoform X1 [Cucurbita maxima]6.1e-3249.11Show/hide
Query:  SFAQYEAIKLIRKNDRDKDGLYIPSSQASVEFGKGEFGKERTPS-----RIPKANNKILPKLGSNPLIKLKDQLEGKTKNSSTRV----LLEMPLSREQM
        ++A+ EA +L++K D + DG+ +   +  V   K    K+   +     +IPKANN +  +  SN  +K K Q++ K K SST+     + ++ LSREQM
Subjt:  SFAQYEAIKLIRKNDRDKDGLYIPSSQASVEFGKGEFGKERTPS-----RIPKANNKILPKLGSNPLIKLKDQLEGKTKNSSTRV----LLEMPLSREQM

Query:  KQIFKQHDSNNDGFLNIWEITKVFAFLGSIIPFNKAHYGLALADANKDGLISEVELDQLIDYASKVMKK
        K+IFK HDSN DGFL+I E+TK F FLGSI+PFNKAHY +A AD N DGLISE ELD+LIDYASK + K
Subjt:  KQIFKQHDSNNDGFLNIWEITKVFAFLGSIIPFNKAHYGLALADANKDGLISEVELDQLIDYASKVMKK

XP_023538534.1 putative calmodulin-like protein 6 isoform X1 [Cucurbita pepo subsp. pepo]2.7e-3249.7Show/hide
Query:  SFAQYEAIKLIRKNDRDKDGLYIPSS-QASVEFGKGEF---GKERTPSRIPKANNKILPKLGSNPLIKLKDQLEGKTKNSSTRVL----LEMPLSREQMK
        ++A+ EA +L++K D + DG+      Q  +   +G       +   S+IPKA+N ++ K  SN  +K K Q++ K K SST+ L     ++ LSREQMK
Subjt:  SFAQYEAIKLIRKNDRDKDGLYIPSS-QASVEFGKGEF---GKERTPSRIPKANNKILPKLGSNPLIKLKDQLEGKTKNSSTRVL----LEMPLSREQMK

Query:  QIFKQHDSNNDGFLNIWEITKVFAFLGSIIPFNKAHYGLALADANKDGLISEVELDQLIDYASKVMKKK
        +IFK HDSN DGFL+I E+TK F FLGSI+PFNKAHY +  AD N DGLISE ELD+LIDYASK + KK
Subjt:  QIFKQHDSNNDGFLNIWEITKVFAFLGSIIPFNKAHYGLALADANKDGLISEVELDQLIDYASKVMKKK

XP_038886759.1 probable calcium-binding protein CML11 [Benincasa hispida]1.9e-3350.56Show/hide
Query:  SHLQASFAQYEAIKLIRKNDRDKDGL--------YIPSSQASVEFGKGEFGKERTPSRIPKANNKILPKLGSNPLIKLKDQLEGKTKNSSTRVL----LE
        S LQA +A+ EA +LI+K DR+ DG+        ++  + +S +         R    IPK NN ++ KL SN  +  K QL  K +NSST+ L      
Subjt:  SHLQASFAQYEAIKLIRKNDRDKDGL--------YIPSSQASVEFGKGEFGKERTPSRIPKANNKILPKLGSNPLIKLKDQLEGKTKNSSTRVL----LE

Query:  MPLSREQMKQIFKQHDSNNDGFLNIWEITKVFAFLGSIIPFNKAHYGLALADANKDGLISEVELDQLIDYASKVMKKK
        +P SREQ+K+IFK HDSN DGFLNI E+TK F  LGS+IPF KAHY +A ADA+KDGLISEVELD+LIDY +K++KKK
Subjt:  MPLSREQMKQIFKQHDSNNDGFLNIWEITKVFAFLGSIIPFNKAHYGLALADANKDGLISEVELDQLIDYASKVMKKK

TrEMBL top hitse value%identityAlignment
A0A6J1GHU7 uncharacterized protein LOC111454074 isoform X11.0e-3250.9Show/hide
Query:  AQYEAIKLIRKNDRDKDGLYIPSS-QASVEFGKGEF---GKERTPSRIPKANNKILPKLGSNPLIKLKDQLEGKTKNSSTRVL----LEMPLSREQMKQI
        A+ EA +L++K D + DG+      Q  +   +G       +   S+IPKA+N +  K  SN  +K K Q++ K K SST+ L     ++ LSREQMK+I
Subjt:  AQYEAIKLIRKNDRDKDGLYIPSS-QASVEFGKGEF---GKERTPSRIPKANNKILPKLGSNPLIKLKDQLEGKTKNSSTRVL----LEMPLSREQMKQI

Query:  FKQHDSNNDGFLNIWEITKVFAFLGSIIPFNKAHYGLALADANKDGLISEVELDQLIDYASKVMKKK
        FK HDSN DGFL+I E+TK F+FLGSI+PFNKAHY +A AD N DGLISE ELD+LIDYASK + KK
Subjt:  FKQHDSNNDGFLNIWEITKVFAFLGSIIPFNKAHYGLALADANKDGLISEVELDQLIDYASKVMKKK

A0A6J1GII5 probable calcium-binding protein CML113.2e-3149.43Show/hide
Query:  SHLQASFAQYEAIKLIRKNDRDKDGLYIPSSQASVEF----GKGEFGKERTPSRIPKANNKILPKLGSNPLIKLKDQLEGKTKNSSTRVLLE----MPLS
        S LQA +A+ +A +LI+K D++ DG+ +   +  V      G  +   +   S+IP+ N+K   KL SNP    K Q++ K   SST+VL E    +PLS
Subjt:  SHLQASFAQYEAIKLIRKNDRDKDGLYIPSSQASVEF----GKGEFGKERTPSRIPKANNKILPKLGSNPLIKLKDQLEGKTKNSSTRVLLE----MPLS

Query:  REQMKQIFKQHDSNNDGFLNIWEITKVFAFLGSIIPFNKAHYGLALADANKDGLISEVELDQLIDYASKVMKKK
        REQ+K+IFK +DS+ DGFLNI E+TK F+FLGSI PF KA Y +  ADAN DGLISE EL++LIDYA K++KKK
Subjt:  REQMKQIFKQHDSNNDGFLNIWEITKVFAFLGSIIPFNKAHYGLALADANKDGLISEVELDQLIDYASKVMKKK

A0A6J1GIQ8 probable calcium-binding protein CML119.5e-3149.43Show/hide
Query:  SHLQASFAQYEAIKLIRKNDRDKDGLYIPSSQASVEF----GKGEFGKERTPSRIPKANNKILPKLGSNPLIKLKDQLEGKTKNSSTRVLLE----MPLS
        S LQA +A+ EA +L++K DR+ DG+ +   +  V      G  +   +R  S+IPK N+K   +L SN     K Q++G    SST+VL E    +PLS
Subjt:  SHLQASFAQYEAIKLIRKNDRDKDGLYIPSSQASVEF----GKGEFGKERTPSRIPKANNKILPKLGSNPLIKLKDQLEGKTKNSSTRVLLE----MPLS

Query:  REQMKQIFKQHDSNNDGFLNIWEITKVFAFLGSIIPFNKAHYGLALADANKDGLISEVELDQLIDYASKVMKKK
        REQ+K+IFK +DS+ DGFLN  E+TK F+FLGSI PF KA Y +  ADAN DGLISE EL++LIDYA K++KKK
Subjt:  REQMKQIFKQHDSNNDGFLNIWEITKVFAFLGSIIPFNKAHYGLALADANKDGLISEVELDQLIDYASKVMKKK

A0A6J1GJT8 probable calcium-binding protein CML111.1e-3149.7Show/hide
Query:  SFAQYEAIKLIRKNDRDKDGLYIPSSQASVEF----GKGEFGKERTPSRIPKANNKILPKLGSNPLIKLKDQLEGKTKNSSTRVLLE----MPLSREQMK
        ++A+ EA +L++K DR+ DG+ +   +  V      G  +   +   S+IPK N+K   +L SN     K Q++GK   SST+VL E    +PLSREQ+K
Subjt:  SFAQYEAIKLIRKNDRDKDGLYIPSSQASVEF----GKGEFGKERTPSRIPKANNKILPKLGSNPLIKLKDQLEGKTKNSSTRVLLE----MPLSREQMK

Query:  QIFKQHDSNNDGFLNIWEITKVFAFLGSIIPFNKAHYGLALADANKDGLISEVELDQLIDYASKVMKKK
        +IFK +DS+ DGFLNI E+TK F+FLGSI PF KA Y +  ADAN DGLISEVEL++LIDYA K++KKK
Subjt:  QIFKQHDSNNDGFLNIWEITKVFAFLGSIIPFNKAHYGLALADANKDGLISEVELDQLIDYASKVMKKK

A0A6J1KUA8 calcium-binding protein H-like isoform X12.9e-3249.11Show/hide
Query:  SFAQYEAIKLIRKNDRDKDGLYIPSSQASVEFGKGEFGKERTPS-----RIPKANNKILPKLGSNPLIKLKDQLEGKTKNSSTRV----LLEMPLSREQM
        ++A+ EA +L++K D + DG+ +   +  V   K    K+   +     +IPKANN +  +  SN  +K K Q++ K K SST+     + ++ LSREQM
Subjt:  SFAQYEAIKLIRKNDRDKDGLYIPSSQASVEFGKGEFGKERTPS-----RIPKANNKILPKLGSNPLIKLKDQLEGKTKNSSTRV----LLEMPLSREQM

Query:  KQIFKQHDSNNDGFLNIWEITKVFAFLGSIIPFNKAHYGLALADANKDGLISEVELDQLIDYASKVMKK
        K+IFK HDSN DGFL+I E+TK F FLGSI+PFNKAHY +A AD N DGLISE ELD+LIDYASK + K
Subjt:  KQIFKQHDSNNDGFLNIWEITKVFAFLGSIIPFNKAHYGLALADANKDGLISEVELDQLIDYASKVMKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACATCAATTCCCACCTTCAAGCTTCATTTGCCCAATATGAAGCAATTAAATTGATAAGGAAGAATGATAGAGACAAGGATGGTCTTTACATTCCCTCTTCTCAAGC
TTCGGTTGAATTCGGCAAAGGAGAATTCGGCAAAGAAAGAACTCCGTCGAGAATTCCGAAAGCTAACAACAAAATTCTACCCAAACTTGGTTCGAATCCTCTCATAAAAT
TGAAAGATCAATTAGAGGGCAAAACTAAAAACTCTTCAACAAGGGTTCTCTTAGAAATGCCACTTAGCAGGGAGCAAATGAAGCAAATTTTCAAACAACATGATAGCAAT
AACGATGGTTTCTTGAACATATGGGAGATAACAAAAGTGTTTGCTTTTCTTGGCTCAATTATTCCATTCAACAAAGCTCATTATGGTTTGGCTCTTGCAGATGCCAATAA
AGATGGTCTAATAAGCGAAGTTGAACTCGATCAACTAATCGATTATGCAAGTAAGGTCATGAAGAAGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCACATCAATTCCCACCTTCAAGCTTCATTTGCCCAATATGAAGCAATTAAATTGATAAGGAAGAATGATAGAGACAAGGATGGTCTTTACATTCCCTCTTCTCAAGC
TTCGGTTGAATTCGGCAAAGGAGAATTCGGCAAAGAAAGAACTCCGTCGAGAATTCCGAAAGCTAACAACAAAATTCTACCCAAACTTGGTTCGAATCCTCTCATAAAAT
TGAAAGATCAATTAGAGGGCAAAACTAAAAACTCTTCAACAAGGGTTCTCTTAGAAATGCCACTTAGCAGGGAGCAAATGAAGCAAATTTTCAAACAACATGATAGCAAT
AACGATGGTTTCTTGAACATATGGGAGATAACAAAAGTGTTTGCTTTTCTTGGCTCAATTATTCCATTCAACAAAGCTCATTATGGTTTGGCTCTTGCAGATGCCAATAA
AGATGGTCTAATAAGCGAAGTTGAACTCGATCAACTAATCGATTATGCAAGTAAGGTCATGAAGAAGAAATAAATATTTGAAGAATACTCATGTACTTCATATCAGAATG
TACGTACGTAGTCTATCATTTGAAACTAGTAAACAATAATTTAAAGATAAGTATCCAT
Protein sequenceShow/hide protein sequence
MHINSHLQASFAQYEAIKLIRKNDRDKDGLYIPSSQASVEFGKGEFGKERTPSRIPKANNKILPKLGSNPLIKLKDQLEGKTKNSSTRVLLEMPLSREQMKQIFKQHDSN
NDGFLNIWEITKVFAFLGSIIPFNKAHYGLALADANKDGLISEVELDQLIDYASKVMKKK