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Sed0024184 (gene) of Chayote v1 genome

Gene IDSed0024184
OrganismSechium edule (Chayote v1)
DescriptionIleal sodium/bile acid cotransporter, putative
Genome locationLG03:6302883..6303386
RNA-Seq ExpressionSed0024184
SyntenySed0024184
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050246.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]1.9e-2553.21Show/hide
Query:  MNYIYSFMAEIKEKNPGISSLTWEWVTSSRPSDCLSVNTKMQKPKTSNSPLNLGKSMLVLTFQASLAMFISAPTSPPSLPTVFFAAAMLISFALAIASIF
        MN +YSF+  I E+NP I+SL    +T  RPS   S        KT N   N+GK++L LTFQA LA+FI++P S P L T  FAAA+LISFA++ A IF
Subjt:  MNYIYSFMAEIKEKNPGISSLTWEWVTSSRPSDCLSVNTKMQKPKTSNSPLNLGKSMLVLTFQASLAMFISAPTSPPSLPTVFFAAAMLISFALAIASIF

Query:  LQNAFPRIALWLEKFSALFSAIGFFIISSLLV-PKFAWISWLACGSCLLAFIVSLK
        LQN FPRIAL  EK  AL +AIG  I++SLL+   FAWISWLA G  L+AF++S +
Subjt:  LQNAFPRIALWLEKFSALFSAIGFFIISSLLV-PKFAWISWLACGSCLLAFIVSLK

KGN49803.1 hypothetical protein Csa_004681 [Cucumis sativus]3.5e-2445.51Show/hide
Query:  MASTQNETSLDMNYIYSFMAEIKEKNPGISSLTWEWVTSSRPSDCLSVNTKMQKPKTSNSPLNLGKSMLVLTFQASLAMFISAPTSPPSLPTVFFAAAML
        M S+  + S+DMN++YS +  I E+NP I+ L            C+ + T      +S +  N+G ++L LTFQA LA+FI++ TS P L T  F AA+L
Subjt:  MASTQNETSLDMNYIYSFMAEIKEKNPGISSLTWEWVTSSRPSDCLSVNTKMQKPKTSNSPLNLGKSMLVLTFQASLAMFISAPTSPPSLPTVFFAAAML

Query:  ISFALAIASIFLQNAFPRIALWLEKFSALFSAIGFFIISSLLV-PKFAWISWLACGSCLLAFIVSLK
        ISFA++   +FLQ+ FPRIAL  EK  AL +AIG  I++SLL+   FAWISWLACG  L+AF++S +
Subjt:  ISFALAIASIFLQNAFPRIALWLEKFSALFSAIGFFIISSLLV-PKFAWISWLACGSCLLAFIVSLK

KGN49806.1 hypothetical protein Csa_004683 [Cucumis sativus]1.0e-2347.93Show/hide
Query:  MAST-QNETSLDMNYIYSFMAEIKEKNPGISSLTWEWVTSSRPSDCLSVNTKMQKPKTSNSPLNLGKSMLVLTFQASLAMFISA-PTSPPSLPTVFFAAA
        MA T  +E SLDMN + S +  +  +NPGISS TW        SDCL +  KMQ+P   NSP   G + L LTFQA + +F+S  P+S   LP+  FAA 
Subjt:  MAST-QNETSLDMNYIYSFMAEIKEKNPGISSLTWEWVTSSRPSDCLSVNTKMQKPKTSNSPLNLGKSMLVLTFQASLAMFISA-PTSPPSLPTVFFAAA

Query:  MLISFALAIASIFLQNAFPRIALWLEKFSALFSAIGFFIISSLLV-PKFAWISWLACGSCLLAFIVSLK
        ML SF  +   + LQ  FP+ A  L+ F ALF+AIG  II SLL+ P F WI WLA G  L AFI+S K
Subjt:  MLISFALAIASIFLQNAFPRIALWLEKFSALFSAIGFFIISSLLV-PKFAWISWLACGSCLLAFIVSLK

KGN49808.1 hypothetical protein Csa_004650 [Cucumis sativus]5.1e-2348.54Show/hide
Query:  MASTQNETSLDMNYIYSFMAEIKEKNPGISSLTWEWVTSSRPSDCLSVNTKMQK--PKTSNSPLNLGKSMLVLTFQASLAMFISA-PTSPPSLPTVFFAA
        MAST ++TSLDM+   SF+  I ++N G+            PS+CL V  +MQ+    T++S   LGK +L L+FQA LA+FIS+ PTSPP L   FFAA
Subjt:  MASTQNETSLDMNYIYSFMAEIKEKNPGISSLTWEWVTSSRPSDCLSVNTKMQK--PKTSNSPLNLGKSMLVLTFQASLAMFISA-PTSPPSLPTVFFAA

Query:  AMLISFALAIASIFLQNAFPRIALWLEKFSALFSAIGF-FIISSLLV-PKFAWISWLACGSCLLAFIVSLK
        A+ ISFA++ A++FL N+FPR A   EK  ALFSA G  FI S LLV   FAWI W+AC   ++ F +S K
Subjt:  AMLISFALAIASIFLQNAFPRIALWLEKFSALFSAIGF-FIISSLLV-PKFAWISWLACGSCLLAFIVSLK

XP_022146444.1 uncharacterized protein LOC111015658 [Momordica charantia]6.4e-2656.8Show/hide
Query:  MASTQNETSLDMNYIYSFMAEIKEKNPGISSLTWEWVTSSRPSDCLSVNTKMQKPKTSNSPLNLGKSMLVLTFQASLAMFISAPTSPPSLPTVFFAAAML
        MAST  +TS+DMN + SF+  I E+N GISS TW   TS+ PSDCL +  +MQ+P  + S  +LGK++L LTFQA LA+FIS P+SPP LPT+ F AA+L
Subjt:  MASTQNETSLDMNYIYSFMAEIKEKNPGISSLTWEWVTSSRPSDCLSVNTKMQKPKTSNSPLNLGKSMLVLTFQASLAMFISAPTSPPSLPTVFFAAAML

Query:  ISFALAIASIFLQNAFPRIALWLEK
        ISFA++ A +FLQ A+PR+AL  EK
Subjt:  ISFALAIASIFLQNAFPRIALWLEK

TrEMBL top hitse value%identityAlignment
A0A0A0KJN8 Uncharacterized protein1.7e-2445.51Show/hide
Query:  MASTQNETSLDMNYIYSFMAEIKEKNPGISSLTWEWVTSSRPSDCLSVNTKMQKPKTSNSPLNLGKSMLVLTFQASLAMFISAPTSPPSLPTVFFAAAML
        M S+  + S+DMN++YS +  I E+NP I+ L            C+ + T      +S +  N+G ++L LTFQA LA+FI++ TS P L T  F AA+L
Subjt:  MASTQNETSLDMNYIYSFMAEIKEKNPGISSLTWEWVTSSRPSDCLSVNTKMQKPKTSNSPLNLGKSMLVLTFQASLAMFISAPTSPPSLPTVFFAAAML

Query:  ISFALAIASIFLQNAFPRIALWLEKFSALFSAIGFFIISSLLV-PKFAWISWLACGSCLLAFIVSLK
        ISFA++   +FLQ+ FPRIAL  EK  AL +AIG  I++SLL+   FAWISWLACG  L+AF++S +
Subjt:  ISFALAIASIFLQNAFPRIALWLEKFSALFSAIGFFIISSLLV-PKFAWISWLACGSCLLAFIVSLK

A0A0A0KJP2 Uncharacterized protein2.4e-2348.54Show/hide
Query:  MASTQNETSLDMNYIYSFMAEIKEKNPGISSLTWEWVTSSRPSDCLSVNTKMQK--PKTSNSPLNLGKSMLVLTFQASLAMFISA-PTSPPSLPTVFFAA
        MAST ++TSLDM+   SF+  I ++N G+            PS+CL V  +MQ+    T++S   LGK +L L+FQA LA+FIS+ PTSPP L   FFAA
Subjt:  MASTQNETSLDMNYIYSFMAEIKEKNPGISSLTWEWVTSSRPSDCLSVNTKMQK--PKTSNSPLNLGKSMLVLTFQASLAMFISA-PTSPPSLPTVFFAA

Query:  AMLISFALAIASIFLQNAFPRIALWLEKFSALFSAIGF-FIISSLLV-PKFAWISWLACGSCLLAFIVSLK
        A+ ISFA++ A++FL N+FPR A   EK  ALFSA G  FI S LLV   FAWI W+AC   ++ F +S K
Subjt:  AMLISFALAIASIFLQNAFPRIALWLEKFSALFSAIGF-FIISSLLV-PKFAWISWLACGSCLLAFIVSLK

A0A0A0KQ03 Uncharacterized protein4.9e-2447.93Show/hide
Query:  MAST-QNETSLDMNYIYSFMAEIKEKNPGISSLTWEWVTSSRPSDCLSVNTKMQKPKTSNSPLNLGKSMLVLTFQASLAMFISA-PTSPPSLPTVFFAAA
        MA T  +E SLDMN + S +  +  +NPGISS TW        SDCL +  KMQ+P   NSP   G + L LTFQA + +F+S  P+S   LP+  FAA 
Subjt:  MAST-QNETSLDMNYIYSFMAEIKEKNPGISSLTWEWVTSSRPSDCLSVNTKMQKPKTSNSPLNLGKSMLVLTFQASLAMFISA-PTSPPSLPTVFFAAA

Query:  MLISFALAIASIFLQNAFPRIALWLEKFSALFSAIGFFIISSLLV-PKFAWISWLACGSCLLAFIVSLK
        ML SF  +   + LQ  FP+ A  L+ F ALF+AIG  II SLL+ P F WI WLA G  L AFI+S K
Subjt:  MLISFALAIASIFLQNAFPRIALWLEKFSALFSAIGFFIISSLLV-PKFAWISWLACGSCLLAFIVSLK

A0A5A7U7U1 Putative Ileal sodium/bile acid cotransporter9.0e-2653.21Show/hide
Query:  MNYIYSFMAEIKEKNPGISSLTWEWVTSSRPSDCLSVNTKMQKPKTSNSPLNLGKSMLVLTFQASLAMFISAPTSPPSLPTVFFAAAMLISFALAIASIF
        MN +YSF+  I E+NP I+SL    +T  RPS   S        KT N   N+GK++L LTFQA LA+FI++P S P L T  FAAA+LISFA++ A IF
Subjt:  MNYIYSFMAEIKEKNPGISSLTWEWVTSSRPSDCLSVNTKMQKPKTSNSPLNLGKSMLVLTFQASLAMFISAPTSPPSLPTVFFAAAMLISFALAIASIF

Query:  LQNAFPRIALWLEKFSALFSAIGFFIISSLLV-PKFAWISWLACGSCLLAFIVSLK
        LQN FPRIAL  EK  AL +AIG  I++SLL+   FAWISWLA G  L+AF++S +
Subjt:  LQNAFPRIALWLEKFSALFSAIGFFIISSLLV-PKFAWISWLACGSCLLAFIVSLK

A0A6J1CY58 uncharacterized protein LOC1110156583.1e-2656.8Show/hide
Query:  MASTQNETSLDMNYIYSFMAEIKEKNPGISSLTWEWVTSSRPSDCLSVNTKMQKPKTSNSPLNLGKSMLVLTFQASLAMFISAPTSPPSLPTVFFAAAML
        MAST  +TS+DMN + SF+  I E+N GISS TW   TS+ PSDCL +  +MQ+P  + S  +LGK++L LTFQA LA+FIS P+SPP LPT+ F AA+L
Subjt:  MASTQNETSLDMNYIYSFMAEIKEKNPGISSLTWEWVTSSRPSDCLSVNTKMQKPKTSNSPLNLGKSMLVLTFQASLAMFISAPTSPPSLPTVFFAAAML

Query:  ISFALAIASIFLQNAFPRIALWLEK
        ISFA++ A +FLQ A+PR+AL  EK
Subjt:  ISFALAIASIFLQNAFPRIALWLEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCAACTCAAAATGAAACCTCCCTGGACATGAATTATATCTATTCCTTCATGGCTGAAATCAAAGAAAAAAATCCTGGAATAAGCAGCCTTACCTGGGAATGGGT
AACATCATCCAGGCCATCAGATTGCCTATCAGTTAACACAAAAATGCAGAAACCTAAAACCAGCAACAGCCCTCTGAATCTGGGGAAGTCAATGCTTGTCCTTACTTTTC
AGGCAAGTTTAGCCATGTTCATCAGTGCTCCCACCTCGCCTCCATCACTTCCTACAGTTTTCTTTGCGGCTGCTATGTTGATTAGCTTTGCACTTGCCATTGCTTCGATT
TTTCTTCAAAACGCATTCCCAAGAATCGCGCTTTGGTTGGAAAAGTTCAGTGCTCTTTTTTCTGCGATTGGTTTTTTCATAATATCAAGTCTTCTAGTCCCGAAATTCGC
TTGGATCAGTTGGCTGGCATGTGGCTCCTGCTTGCTAGCCTTTATCGTCTCCTTAAAGTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCAACTCAAAATGAAACCTCCCTGGACATGAATTATATCTATTCCTTCATGGCTGAAATCAAAGAAAAAAATCCTGGAATAAGCAGCCTTACCTGGGAATGGGT
AACATCATCCAGGCCATCAGATTGCCTATCAGTTAACACAAAAATGCAGAAACCTAAAACCAGCAACAGCCCTCTGAATCTGGGGAAGTCAATGCTTGTCCTTACTTTTC
AGGCAAGTTTAGCCATGTTCATCAGTGCTCCCACCTCGCCTCCATCACTTCCTACAGTTTTCTTTGCGGCTGCTATGTTGATTAGCTTTGCACTTGCCATTGCTTCGATT
TTTCTTCAAAACGCATTCCCAAGAATCGCGCTTTGGTTGGAAAAGTTCAGTGCTCTTTTTTCTGCGATTGGTTTTTTCATAATATCAAGTCTTCTAGTCCCGAAATTCGC
TTGGATCAGTTGGCTGGCATGTGGCTCCTGCTTGCTAGCCTTTATCGTCTCCTTAAAGTATTAA
Protein sequenceShow/hide protein sequence
MASTQNETSLDMNYIYSFMAEIKEKNPGISSLTWEWVTSSRPSDCLSVNTKMQKPKTSNSPLNLGKSMLVLTFQASLAMFISAPTSPPSLPTVFFAAAMLISFALAIASI
FLQNAFPRIALWLEKFSALFSAIGFFIISSLLVPKFAWISWLACGSCLLAFIVSLKY