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Sed0024187 (gene) of Chayote v1 genome

Gene IDSed0024187
OrganismSechium edule (Chayote v1)
Descriptioncalmodulin-like
Genome locationLG11:24126598..24127238
RNA-Seq ExpressionSed0024187
SyntenySed0024187
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022951879.1 calmodulin-like [Cucurbita moschata]6.3e-2369.62Show/hide
Query:  MKLSREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLVDYAMRNGYYKK
        MKLSR +IKEIF EHDIDGDG LS+SE+T+AFS  G+ +P YKAHYGL+YAD DGDGLI+E EL+KLVDYA R    K+
Subjt:  MKLSREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLVDYAMRNGYYKK

XP_022951880.1 calmodulin-like [Cucurbita moschata]2.4e-2270.27Show/hide
Query:  HMKLSREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLVDYAMR
        HM+LSR EI++IF EHDIDGDG L++SE+T+AFS +G+ LP YKAHYGL+YAD DGDG I+E EL+KLVDYA R
Subjt:  HMKLSREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLVDYAMR

XP_023002888.1 calmodulin-like [Cucurbita maxima]6.3e-2369.62Show/hide
Query:  MKLSREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLVDYAMRNGYYKK
        MKLSR +IKEIF EHDIDGDG LS+SE+T+AFS  G+ +P YKAHYGL+YAD DGDGLI+E EL+KLVDYA R    K+
Subjt:  MKLSREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLVDYAMRNGYYKK

XP_023002889.1 calmodulin-A-like [Cucurbita maxima]5.3e-2270.27Show/hide
Query:  HMKLSREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLVDYAMR
        HM+LSR EI++IF EHDIDGDG L++SE+T+AFS +G+ LP YKAHYGL+YAD DGDG I+E EL KLVDYA R
Subjt:  HMKLSREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLVDYAMR

XP_023537874.1 probable calcium-binding protein CML11 [Cucurbita pepo subsp. pepo]5.3e-2270.27Show/hide
Query:  HMKLSREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLVDYAMR
        HM+LSR EI++IF EHDIDGDG L++SE+T+AFS +G+ LP YKAHYGL+YAD DGDG I+E EL KLVDYA R
Subjt:  HMKLSREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLVDYAMR

TrEMBL top hitse value%identityAlignment
A0A6J1CSH1 probable calcium-binding protein CML151.3e-2165.43Show/hide
Query:  MKLSREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLVDYAMRNGYYKKIN
        +K SR +IKEIF EHDIDGDG LS+SE+ +AFS LG+ +P YKAHYGL++AD DGDGLI+E ELDKLVDYA +    K  N
Subjt:  MKLSREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLVDYAMRNGYYKKIN

A0A6J1GK16 calmodulin-like3.0e-2369.62Show/hide
Query:  MKLSREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLVDYAMRNGYYKK
        MKLSR +IKEIF EHDIDGDG LS+SE+T+AFS  G+ +P YKAHYGL+YAD DGDGLI+E EL+KLVDYA R    K+
Subjt:  MKLSREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLVDYAMRNGYYKK

A0A6J1GK54 calmodulin-like1.2e-2270.27Show/hide
Query:  HMKLSREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLVDYAMR
        HM+LSR EI++IF EHDIDGDG L++SE+T+AFS +G+ LP YKAHYGL+YAD DGDG I+E EL+KLVDYA R
Subjt:  HMKLSREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLVDYAMR

A0A6J1KRR4 calmodulin-A-like2.6e-2270.27Show/hide
Query:  HMKLSREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLVDYAMR
        HM+LSR EI++IF EHDIDGDG L++SE+T+AFS +G+ LP YKAHYGL+YAD DGDG I+E EL KLVDYA R
Subjt:  HMKLSREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLVDYAMR

A0A6J1KUW2 calmodulin-like3.0e-2369.62Show/hide
Query:  MKLSREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLVDYAMRNGYYKK
        MKLSR +IKEIF EHDIDGDG LS+SE+T+AFS  G+ +P YKAHYGL+YAD DGDGLI+E EL+KLVDYA R    K+
Subjt:  MKLSREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLVDYAMRNGYYKK

SwissProt top hitse value%identityAlignment
P05933 Calmodulin2.8e-0533.85Show/hide
Query:  SREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLV
        + EE++E F+  D DG+G +++ E+T   + LG RL   +    +  AD DGDG+I   E  +++
Subjt:  SREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLV

P18061 Calmodulin1.0e-0440Show/hide
Query:  SREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLV
        S EEIKE FR  D DG+G +S +E+    + LG +L   +    +  AD DGDG I   E  K++
Subjt:  SREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLV

P41041 Calmodulin4.7e-0536.92Show/hide
Query:  SREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLV
        S EEI+E F+  D DG+G++S +E+    + LG +L   +    +  AD DGDG+I   E  K++
Subjt:  SREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLV

P62184 Calmodulin1.0e-0438.46Show/hide
Query:  SREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLV
        S EEI+E FR  D DGDG +S +E+    + LG +L   +    +  AD DGDG +   E  K++
Subjt:  SREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLV

Q9FZ75 Probable calcium-binding protein CML151.0e-0430Show/hide
Query:  LSREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLVDYAMRNGYYKKINT
        ++ E++ EIF+  D DG+G +S +E+  A + +G  L Y +    +  AD +GDG+I+  E   ++  +  + +  KIN+
Subjt:  LSREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLVDYAMRNGYYKKINT

Arabidopsis top hitse value%identityAlignment
AT1G18530.1 EF hand calcium-binding protein family7.4e-0630Show/hide
Query:  LSREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLVDYAMRNGYYKKINT
        ++ E++ EIF+  D DG+G +S +E+  A + +G  L Y +    +  AD +GDG+I+  E   ++  +  + +  KIN+
Subjt:  LSREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLVDYAMRNGYYKKINT

AT1G66410.1 calmodulin 48.2e-0536.92Show/hide
Query:  SREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLV
        S EE+KE FR  D D +G +S +E+    + LG +L   +    +  AD DGDG I   E  K++
Subjt:  SREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLV

AT1G66410.2 calmodulin 48.2e-0536.92Show/hide
Query:  SREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLV
        S EE+KE FR  D D +G +S +E+    + LG +L   +    +  AD DGDG I   E  K++
Subjt:  SREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLV

AT2G27030.3 calmodulin 54.8e-0537.5Show/hide
Query:  SREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLVDYAMRNG
        S EE+KE FR  D D +G +S +E+    + LG +L   +    +  AD DGDG I   E  K++  A R G
Subjt:  SREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLVDYAMRNG

AT3G51920.1 calmodulin 93.7e-0533.33Show/hide
Query:  EEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLV
        +E+ E+FR  D DGDG++S  E+ +    +G ++   +A + +  AD DGDG ++  E  K++
Subjt:  EEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTCTCCAGATCGCATATGAAGTTGTCGAGGGAGGAGATAAAGGAGATCTTTAGAGAGCACGACATCGACGGAGATGGCGTCCTCAGCATCAGTGAGATTACTCA
AGCCTTTAGCTTATTAGGAAATCGTCTCCCGTACTACAAAGCTCACTATGGTCTCTCATATGCTGATGGAGATGGTGATGGCTTGATCACTGAATGCGAGCTTGATAAGC
TCGTTGATTATGCCATGAGGAATGGATATTACAAAAAGATCAACACAGATATTTACGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCTCTCCAGATCGCATATGAAGTTGTCGAGGGAGGAGATAAAGGAGATCTTTAGAGAGCACGACATCGACGGAGATGGCGTCCTCAGCATCAGTGAGATTACTCA
AGCCTTTAGCTTATTAGGAAATCGTCTCCCGTACTACAAAGCTCACTATGGTCTCTCATATGCTGATGGAGATGGTGATGGCTTGATCACTGAATGCGAGCTTGATAAGC
TCGTTGATTATGCCATGAGGAATGGATATTACAAAAAGATCAACACAGATATTTACGTGTGA
Protein sequenceShow/hide protein sequence
MALSRSHMKLSREEIKEIFREHDIDGDGVLSISEITQAFSLLGNRLPYYKAHYGLSYADGDGDGLITECELDKLVDYAMRNGYYKKINTDIYV