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Sed0024202 (gene) of Chayote v1 genome

Gene IDSed0024202
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG03:648580..649154
RNA-Seq ExpressionSed0024202
SyntenySed0024202
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011655383.1 uncharacterized protein LOC105435522 [Cucumis sativus]1.2e-3469.77Show/hide
Query:  MADLGAAPPGKYRYRRLRYSDEFEEAFGRSRRGEEQRTGRFAGRSRRWFRIRRS------SIGRKLKKLRIPSLSKLSRRKSRLVAAMRGFISKVLKRFK
        MADL  A  GK+RYRRLRYS+EFEEAFGRSR G  +   +   R R WFR+R        SIGR+LKKLRIPSL KL RRK RLV AMRG I+KV+KRF+
Subjt:  MADLGAAPPGKYRYRRLRYSDEFEEAFGRSRRGEEQRTGRFAGRSRRWFRIRRS------SIGRKLKKLRIPSLSKLSRRKSRLVAAMRGFISKVLKRFK

Query:  DGEAYLGDLFAGNYLFLQVNPSSIKTLKN
        DGEAYLGDLFAGNYLFLQVNPSS+K LKN
Subjt:  DGEAYLGDLFAGNYLFLQVNPSSIKTLKN

XP_022922294.1 uncharacterized protein LOC111430312 [Cucurbita moschata]9.0e-4674.82Show/hide
Query:  LGLQKSAMADLG-AAPPGKYRYRRLRYSDEFEEAFGRSRRGEEQRTGRFAGRSRRWFRIRRSSIGRKLKKLRIPSLSKLSRRKSRLVAAMRGFISKVLKR
        L L +SAM DL   APPGK+RYRRLRYS+EFEEAFGRSRRGE +R  RF GRS+RWFRIRR+SIGR+LKKLR+PSL KL RRKSRLV AMRG I+KV+KR
Subjt:  LGLQKSAMADLG-AAPPGKYRYRRLRYSDEFEEAFGRSRRGEEQRTGRFAGRSRRWFRIRRSSIGRKLKKLRIPSLSKLSRRKSRLVAAMRGFISKVLKR

Query:  FKDGEAYLGDLFAGNYLFLQVNPSSIKTLKNQQLCPSKF
        F++GEAYLGDLFAGNYLFLQVNPSSIK  KN       F
Subjt:  FKDGEAYLGDLFAGNYLFLQVNPSSIKTLKNQQLCPSKF

XP_022990096.1 uncharacterized protein LOC111487096 [Cucurbita maxima]4.2e-4379.84Show/hide
Query:  MADLG-AAPPGKYRYRRLRYSDEFEEAFGRSRRGEEQRTGRFAGRSRRWFRIRRSSIGRKLKKLRIPSLSKLSRRKSRLVAAMRGFISKVLKRFKDGEAY
        M DL   APPGK+RYRRLRYS+EFEEAFGRSRRGEE+R  RF GRS+RWF+IRR+SIGR+LKKLR+PSL KL RRKSRLV AM+G ISKV+KRF++GEAY
Subjt:  MADLG-AAPPGKYRYRRLRYSDEFEEAFGRSRRGEEQRTGRFAGRSRRWFRIRRSSIGRKLKKLRIPSLSKLSRRKSRLVAAMRGFISKVLKRFKDGEAY

Query:  LGDLFAGNYLFLQVNPSSIKTLKN
        LGDLFAGNYLFLQVNPSSIK  KN
Subjt:  LGDLFAGNYLFLQVNPSSIKTLKN

XP_023551709.1 uncharacterized protein LOC111809563 [Cucurbita pepo subsp. pepo]6.0e-4275Show/hide
Query:  MADLG-AAPPGKYRYRRLRYSDEFEEAFGRSRRGEEQRTGRFAGRSRRWFRIRRSSIGRKLKKLRIPSLSKLSRRKSRLVAAMRGFISKVLKRFKDGEAY
        M DL   A PGK+RYRRLRYS+EFEEAFGRSR GEE+R  RF GRS+RWFRIRR+SIGR+LKKLR+PSL KL RRKSRLV AMRG I+KV+KRF++GEAY
Subjt:  MADLG-AAPPGKYRYRRLRYSDEFEEAFGRSRRGEEQRTGRFAGRSRRWFRIRRSSIGRKLKKLRIPSLSKLSRRKSRLVAAMRGFISKVLKRFKDGEAY

Query:  LGDLFAGNYLFLQVNPSSIKTLKNQQLCPSKF
        LGDLFAGNYLFLQVNPSSIK  KN       F
Subjt:  LGDLFAGNYLFLQVNPSSIKTLKNQQLCPSKF

XP_038889218.1 uncharacterized protein LOC120079105 [Benincasa hispida]3.1e-3873.64Show/hide
Query:  MADLGAAPPGKYRYRRLRYSDEFEEAFGRSRRGEEQRTGRFAGRSRRWFRIRR-SSIGRKLKKLRIPSLSKLSRRKSRLVAAMRGFISKVLKRFKDGEAY
        MADL  AP  K+RYRRL YS+EFEEAFGR R GE     R   RS+RWFRIR+ SSIGR+LKKLRIPSL KL RRKS+LV AMRG ISK+LKRF+DGEAY
Subjt:  MADLGAAPPGKYRYRRLRYSDEFEEAFGRSRRGEEQRTGRFAGRSRRWFRIRR-SSIGRKLKKLRIPSLSKLSRRKSRLVAAMRGFISKVLKRFKDGEAY

Query:  LGDLFAGNYLFLQVNPSSIKTLKNQQLCP
        LGDLFAGNYLFLQVNPSS+K LKN    P
Subjt:  LGDLFAGNYLFLQVNPSSIKTLKNQQLCP

TrEMBL top hitse value%identityAlignment
A0A0A0KSD1 Uncharacterized protein5.9e-3569.77Show/hide
Query:  MADLGAAPPGKYRYRRLRYSDEFEEAFGRSRRGEEQRTGRFAGRSRRWFRIRRS------SIGRKLKKLRIPSLSKLSRRKSRLVAAMRGFISKVLKRFK
        MADL  A  GK+RYRRLRYS+EFEEAFGRSR G  +   +   R R WFR+R        SIGR+LKKLRIPSL KL RRK RLV AMRG I+KV+KRF+
Subjt:  MADLGAAPPGKYRYRRLRYSDEFEEAFGRSRRGEEQRTGRFAGRSRRWFRIRRS------SIGRKLKKLRIPSLSKLSRRKSRLVAAMRGFISKVLKRFK

Query:  DGEAYLGDLFAGNYLFLQVNPSSIKTLKN
        DGEAYLGDLFAGNYLFLQVNPSS+K LKN
Subjt:  DGEAYLGDLFAGNYLFLQVNPSSIKTLKN

A0A1S4E272 uncharacterized protein LOC1079916313.8e-3470.54Show/hide
Query:  MADLGAAPPGKYRYRRLRYSDEFEEAFGRSRRGEEQRTGRFAGRSRRWFRIRRS------SIGRKLKKLRIPSLSKLSRRKSRLVAAMRGFISKVLKRFK
        MADL  A  GK+RYRRLRYS+EFEEAFGRSR G      R+  R R WFR+R        SIGR+LKKLRIPSL KL RRK RLV AMRG I+KVLKRF+
Subjt:  MADLGAAPPGKYRYRRLRYSDEFEEAFGRSRRGEEQRTGRFAGRSRRWFRIRRS------SIGRKLKKLRIPSLSKLSRRKSRLVAAMRGFISKVLKRFK

Query:  DGEAYLGDLFAGNYLFLQVNPSSIKTLKN
        DGEAYLGDLFAGNYLFLQVNPSS+K +KN
Subjt:  DGEAYLGDLFAGNYLFLQVNPSSIKTLKN

A0A6J1E2Z5 uncharacterized protein LOC1114303124.3e-4674.82Show/hide
Query:  LGLQKSAMADLG-AAPPGKYRYRRLRYSDEFEEAFGRSRRGEEQRTGRFAGRSRRWFRIRRSSIGRKLKKLRIPSLSKLSRRKSRLVAAMRGFISKVLKR
        L L +SAM DL   APPGK+RYRRLRYS+EFEEAFGRSRRGE +R  RF GRS+RWFRIRR+SIGR+LKKLR+PSL KL RRKSRLV AMRG I+KV+KR
Subjt:  LGLQKSAMADLG-AAPPGKYRYRRLRYSDEFEEAFGRSRRGEEQRTGRFAGRSRRWFRIRRSSIGRKLKKLRIPSLSKLSRRKSRLVAAMRGFISKVLKR

Query:  FKDGEAYLGDLFAGNYLFLQVNPSSIKTLKNQQLCPSKF
        F++GEAYLGDLFAGNYLFLQVNPSSIK  KN       F
Subjt:  FKDGEAYLGDLFAGNYLFLQVNPSSIKTLKNQQLCPSKF

A0A6J1FMJ7 uncharacterized protein LOC1114453176.5e-3468.7Show/hide
Query:  KSAMADLGAAPPGKYRYRRLRYSDEFEEAFGRSRRGEEQRTGRFAGRSRRWFRIRRSSIGRKLKKLRIPSLSKLSRRKSRLVAAMRGFISKVLKRFKDGE
        KS MADL  A   K+RYRRLR+SDE E AF RSR GE++R G         FR+RR+SIGR+LKKLRIPSL KL  RKSRLV AM G ISKVLKRF+DGE
Subjt:  KSAMADLGAAPPGKYRYRRLRYSDEFEEAFGRSRRGEEQRTGRFAGRSRRWFRIRRSSIGRKLKKLRIPSLSKLSRRKSRLVAAMRGFISKVLKRFKDGE

Query:  AYLGDLFAGNYLFLQVNPSSIKTLKNQQLCP
        AYLGDLFAGNYLFLQ+NPSSIK L N    P
Subjt:  AYLGDLFAGNYLFLQVNPSSIKTLKNQQLCP

A0A6J1JM01 uncharacterized protein LOC1114870962.0e-4379.84Show/hide
Query:  MADLG-AAPPGKYRYRRLRYSDEFEEAFGRSRRGEEQRTGRFAGRSRRWFRIRRSSIGRKLKKLRIPSLSKLSRRKSRLVAAMRGFISKVLKRFKDGEAY
        M DL   APPGK+RYRRLRYS+EFEEAFGRSRRGEE+R  RF GRS+RWF+IRR+SIGR+LKKLR+PSL KL RRKSRLV AM+G ISKV+KRF++GEAY
Subjt:  MADLG-AAPPGKYRYRRLRYSDEFEEAFGRSRRGEEQRTGRFAGRSRRWFRIRRSSIGRKLKKLRIPSLSKLSRRKSRLVAAMRGFISKVLKRFKDGEAY

Query:  LGDLFAGNYLFLQVNPSSIKTLKN
        LGDLFAGNYLFLQVNPSSIK  KN
Subjt:  LGDLFAGNYLFLQVNPSSIKTLKN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G14410.1 unknown protein1.1e-0636.11Show/hide
Query:  YRRLRYSDEFEEAFGRSRRGEEQRTGRFAGRSRRWFRI---RRSSIGRKLKKLRIPSLSKLSRRKSRLVAAMRGFISKVLKRFKDGEAYLGDLFAGNYLF
        Y+RL   D   + FG + R   +R+  ++ R +R   +   RR  +  K+++LR     K +R K+ ++        K+LKR K+ +++ GDLFAGNYLF
Subjt:  YRRLRYSDEFEEAFGRSRRGEEQRTGRFAGRSRRWFRI---RRSSIGRKLKKLRIPSLSKLSRRKSRLVAAMRGFISKVLKRFKDGEAYLGDLFAGNYLF

Query:  LQVNPSSI
        +QVNPSS+
Subjt:  LQVNPSSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCACAGTACTCGACTTCCCAAACACCATTTTCTCTCGGTCTCCAAAAATCGGCCATGGCGGATCTCGGAGCCGCACCGCCGGGCAAATACCGGTACCGGCGACT
GAGATACAGCGACGAATTCGAGGAGGCGTTTGGGAGATCGAGGCGAGGCGAAGAACAGAGGACTGGGCGATTCGCAGGAAGATCGAGGCGGTGGTTCAGAATCCGAAGAT
CTTCAATCGGGAGGAAATTGAAGAAACTCAGAATCCCCAGCCTCTCAAAGCTCTCGAGACGGAAATCGCGGCTCGTTGCGGCCATGAGAGGCTTCATCTCGAAGGTCTTG
AAGAGATTCAAAGATGGCGAAGCGTATTTGGGAGATCTTTTTGCGGGAAATTATTTGTTCCTTCAGGTTAATCCCAGCTCTATCAAAACCCTAAAAAATCAGCAATTATG
CCCTTCCAAATTTCGCACTCAACCTTTGACTCATTAG
mRNA sequenceShow/hide mRNA sequence
CATAAATGCACTCAACAATCGCAGACCCTTTTAATGGCCTCACAGTACTCGACTTCCCAAACACCATTTTCTCTCGGTCTCCAAAAATCGGCCATGGCGGATCTCGGAGC
CGCACCGCCGGGCAAATACCGGTACCGGCGACTGAGATACAGCGACGAATTCGAGGAGGCGTTTGGGAGATCGAGGCGAGGCGAAGAACAGAGGACTGGGCGATTCGCAG
GAAGATCGAGGCGGTGGTTCAGAATCCGAAGATCTTCAATCGGGAGGAAATTGAAGAAACTCAGAATCCCCAGCCTCTCAAAGCTCTCGAGACGGAAATCGCGGCTCGTT
GCGGCCATGAGAGGCTTCATCTCGAAGGTCTTGAAGAGATTCAAAGATGGCGAAGCGTATTTGGGAGATCTTTTTGCGGGAAATTATTTGTTCCTTCAGGTTAATCCCAG
CTCTATCAAAACCCTAAAAAATCAGCAATTATGCCCTTCCAAATTTCGCACTCAACCTTTGACTCATTAGTAATTAATCTTTTTTTTCTTCCTATTTTATATGAGATCTC
TGCTTCAGATGCCAGTTGGTTTGAA
Protein sequenceShow/hide protein sequence
MASQYSTSQTPFSLGLQKSAMADLGAAPPGKYRYRRLRYSDEFEEAFGRSRRGEEQRTGRFAGRSRRWFRIRRSSIGRKLKKLRIPSLSKLSRRKSRLVAAMRGFISKVL
KRFKDGEAYLGDLFAGNYLFLQVNPSSIKTLKNQQLCPSKFRTQPLTH