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Sed0024214 (gene) of Chayote v1 genome

Gene IDSed0024214
OrganismSechium edule (Chayote v1)
DescriptionSHSP domain-containing protein
Genome locationLG03:3400543..3402463
RNA-Seq ExpressionSed0024214
SyntenySed0024214
Gene Ontology termsNA
InterPro domainsIPR002068 - Alpha crystallin/Hsp20 domain
IPR008978 - HSP20-like chaperone
IPR045045 - Small heat shock protein RTM2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646641.1 hypothetical protein Csa_005322 [Cucumis sativus]1.8e-1644.04Show/hide
Query:  MSSPILAQDWSS-ITRPNQPFSPKSEWKEVDE-GGYKLIVNLPGFSKDQVRINLHTSSRLLIIMGQKTDG-YSVKRLNERIKIGDKCPIDEVCASLEYDD
        MSS I+ QDW + +T+ NQ F P   ++E +E   +   + LPGFSKD++RINL+T +R++++ GQK+DG +++ RLNER+ I + C ++ V A L  D 
Subjt:  MSSPILAQDWSS-ITRPNQPFSPKSEWKEVDE-GGYKLIVNLPGFSKDQVRINLHTSSRLLIIMGQKTDG-YSVKRLNERIKIGDKCPIDEVCASLEYDD

Query:  LVVTFHPKK
        L+VTF  +K
Subjt:  LVVTFHPKK

KAG6578833.1 Chlorophyll(ide) b reductase NOL, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.5e-0746.27Show/hide
Query:  MSSPILAQDWSSITRPNQPFSPKSEWKEVDEGGYKLIVNLPGFSKDQVRINLHTSSRLLIIMGQKTD
        MSS I+ QDW  +TR +QPFSP ++W E +E    L + LPGF K++++I L+ ++R L + GQK D
Subjt:  MSSPILAQDWSSITRPNQPFSPKSEWKEVDEGGYKLIVNLPGFSKDQVRINLHTSSRLLIIMGQKTD

KAG6602241.1 hypothetical protein SDJN03_07474, partial [Cucurbita argyrosperma subsp. sororia]4.2e-1035.64Show/hide
Query:  WSSITRPNQPFSPKSEWKEVDEGG---YKLIVNLPGFSKDQVRINLHTSSRLLIIMGQKTDGYSVKRLNERIKIGDKCPIDEVCASLEYDDLVVTFHPKK
        W  + +  + + P  EWKE  E     +++I++  G S++Q++I++    R + IM  K +GY++ R+NE I I  +C +D V AS   +DL++TF PKK
Subjt:  WSSITRPNQPFSPKSEWKEVDEGG---YKLIVNLPGFSKDQVRINLHTSSRLLIIMGQKTDGYSVKRLNERIKIGDKCPIDEVCASLEYDDLVVTFHPKK

Query:  T
        T
Subjt:  T

KAG7016359.1 hypothetical protein SDJN02_21467 [Cucurbita argyrosperma subsp. argyrosperma]2.7e-1747.66Show/hide
Query:  MSSPILAQDWSSITRPNQPFSPKSEWKEVDEGGYKLIVNLPGFSKDQVRINLHTSSRLLIIMGQKTDG-YSVKRLNERIKIGDKCPIDEVCASLEYDDLV
        MSS I+ QDW  +TR +QPFSP ++W E +E    L + LPGF K++++I L+ ++R L + GQK DG +++ RLNERI I D C +D V A L    L 
Subjt:  MSSPILAQDWSSITRPNQPFSPKSEWKEVDEGGYKLIVNLPGFSKDQVRINLHTSSRLLIIMGQKTDG-YSVKRLNERIKIGDKCPIDEVCASLEYDDLV

Query:  VTFHPKK
        VTF  KK
Subjt:  VTFHPKK

XP_022939359.1 uncharacterized protein LOC111445297 [Cucurbita moschata]5.5e-1848.6Show/hide
Query:  MSSPILAQDWSSITRPNQPFSPKSEWKEVDEGGYKLIVNLPGFSKDQVRINLHTSSRLLIIMGQKTDG-YSVKRLNERIKIGDKCPIDEVCASLEYDDLV
        MSS I+ QDW  +TR +QPFSP ++W E +E    L + LPGF K+Q++I L+ ++R L + GQK DG +++ RLNERI I D C +D V A L    L 
Subjt:  MSSPILAQDWSSITRPNQPFSPKSEWKEVDEGGYKLIVNLPGFSKDQVRINLHTSSRLLIIMGQKTDG-YSVKRLNERIKIGDKCPIDEVCASLEYDDLV

Query:  VTFHPKK
        VTF  KK
Subjt:  VTFHPKK

TrEMBL top hitse value%identityAlignment
A0A0A0KB53 SHSP domain-containing protein8.5e-1744.04Show/hide
Query:  MSSPILAQDWSS-ITRPNQPFSPKSEWKEVDE-GGYKLIVNLPGFSKDQVRINLHTSSRLLIIMGQKTDG-YSVKRLNERIKIGDKCPIDEVCASLEYDD
        MSS I+ QDW + +T+ NQ F P   ++E +E   +   + LPGFSKD++RINL+T +R++++ GQK+DG +++ RLNER+ I + C ++ V A L  D 
Subjt:  MSSPILAQDWSS-ITRPNQPFSPKSEWKEVDE-GGYKLIVNLPGFSKDQVRINLHTSSRLLIIMGQKTDG-YSVKRLNERIKIGDKCPIDEVCASLEYDD

Query:  LVVTFHPKK
        L+VTF  +K
Subjt:  LVVTFHPKK

A0A0S3SJ26 SHSP domain-containing protein3.0e-0635.05Show/hide
Query:  SSITRPNQPFSPKSEWKEVDEGGYKLIVNLPGFSKDQVRINLHTSSRLLIIMGQK-TDGYSVKRLNERIKIGDKCPIDEVCASLEYDDLVVTFHPKK
        SSI    + F PKSE KE +E  Y L++ LPGF K++++IN   SSRL+ + G++   G  +    +   + + C ++++    E   L VT  PKK
Subjt:  SSITRPNQPFSPKSEWKEVDEGGYKLIVNLPGFSKDQVRINLHTSSRLLIIMGQK-TDGYSVKRLNERIKIGDKCPIDEVCASLEYDDLVVTFHPKK

A0A3P6D0V5 SHSP domain-containing protein2.3e-0633.71Show/hide
Query:  FSPKSEWKEVDEGGYKLIVNLPGFSKDQVRINLHTSSRLLIIMGQKTDGY-SVKRLNERIKIGDKCPIDEVCASLEYDDLVVTFHPKKT
        F PKSEWK+  +    L ++LPGF+++QV++    +S++L + G++  GY    R NE   +   C +D++  S  ++ L +T  PK+T
Subjt:  FSPKSEWKEVDEGGYKLIVNLPGFSKDQVRINLHTSSRLLIIMGQKTDGY-SVKRLNERIKIGDKCPIDEVCASLEYDDLVVTFHPKKT

A0A5C7GXC0 SHSP domain-containing protein1.4e-0638.3Show/hide
Query:  TRPNQPFSPKSEWKEVDEGGYKLIVNLPGFSKDQVRINLHTSSRLLIIMG-QKTDGYSVKRLNERIKIGDKCPIDEVCASLEYDDLVVTFHPKK
        T  ++ + P SEWKE  E  Y L V+LP F+K+Q++I    SSR++ + G +K       R NE   I D C ID++ A    + L+VT  PK+
Subjt:  TRPNQPFSPKSEWKEVDEGGYKLIVNLPGFSKDQVRINLHTSSRLLIIMG-QKTDGYSVKRLNERIKIGDKCPIDEVCASLEYDDLVVTFHPKK

A0A6J1FGX8 uncharacterized protein LOC1114452972.6e-1848.6Show/hide
Query:  MSSPILAQDWSSITRPNQPFSPKSEWKEVDEGGYKLIVNLPGFSKDQVRINLHTSSRLLIIMGQKTDG-YSVKRLNERIKIGDKCPIDEVCASLEYDDLV
        MSS I+ QDW  +TR +QPFSP ++W E +E    L + LPGF K+Q++I L+ ++R L + GQK DG +++ RLNERI I D C +D V A L    L 
Subjt:  MSSPILAQDWSSITRPNQPFSPKSEWKEVDEGGYKLIVNLPGFSKDQVRINLHTSSRLLIIMGQKTDG-YSVKRLNERIKIGDKCPIDEVCASLEYDDLV

Query:  VTFHPKK
        VTF  KK
Subjt:  VTFHPKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27140.1 HSP20-like chaperones superfamily protein6.7e-0632.26Show/hide
Query:  DWSSITRPNQPFSPKSEWKEVDEGGYKLIVNLPGFSKDQVRINLHTSSRLLIIMGQKTDGYSV-KRLNERIKIGDKCPIDEVCASLEYDDLVV
        D ++  R    F P S WK  ++G   L + LPGF K+Q+++ + T++R L +MG +  G +   R  +   I     +D V A  E  +LVV
Subjt:  DWSSITRPNQPFSPKSEWKEVDEGGYKLIVNLPGFSKDQVRINLHTSSRLLIIMGQKTDGYSV-KRLNERIKIGDKCPIDEVCASLEYDDLVV

AT3G10680.1 HSP20-like chaperones superfamily protein3.9e-0629.76Show/hide
Query:  FSPKSEWKEVDEGGYKLIVNLPGFSKDQVRINLHTSSRLLIIMGQKTDGYSVK-RLNERIKIGDKCPIDEVCASLEYDDLVVTF
        F P+++W       + L VNLPGF +DQ+ I     +R + I GQ+      K R +E  ++ D C + ++  S  +  L + F
Subjt:  FSPKSEWKEVDEGGYKLIVNLPGFSKDQVRINLHTSSRLLIIMGQKTDGYSVK-RLNERIKIGDKCPIDEVCASLEYDDLVVTF

AT5G20970.1 HSP20-like chaperones superfamily protein3.3e-0527.96Show/hide
Query:  ITRPNQPFSPKSEWKEVDEGGYKLIVNLPGFSKDQVRINLHTSSRLLIIMGQKTDGYSVKRLNERIKIGDKCPIDEVCASLEYDDLVVTFHPK
        I R  Q F P + W   +     L+ +LPGF K+Q+++++  + +L +   + T G    R ++ I +     ID V A  + + L +  HPK
Subjt:  ITRPNQPFSPKSEWKEVDEGGYKLIVNLPGFSKDQVRINLHTSSRLLIIMGQKTDGYSVKRLNERIKIGDKCPIDEVCASLEYDDLVVTFHPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAGTCCGATCCTTGCACAAGATTGGAGCAGCATAACTCGACCGAACCAACCATTTTCTCCTAAAAGTGAGTGGAAAGAAGTCGATGAGGGCGGCTATAAGTTGAT
CGTCAATCTTCCAGGTTTTTCGAAAGACCAAGTACGAATCAACCTGCATACAAGCTCGAGGCTTCTTATAATTATGGGACAAAAGACCGATGGCTATAGTGTCAAACGTT
TGAATGAGCGCATAAAAATTGGTGATAAATGTCCAATAGATGAAGTTTGTGCAAGCTTAGAGTATGATGATCTTGTTGTTACGTTCCATCCAAAAAAAACAAGATCCTAA
mRNA sequenceShow/hide mRNA sequence
CTTTTTTTCCACTCATCAAATTATTCCACTTTAAATACAAAACAAAGCCAAAAGCAATATGAAAGGAATAAGTTCTTATGAAAAGAAGTAACATAGAAATTAGAATAACC
CATATATAAATGCTCCTCTCTTGTATAAAGCCACATTGCTCATAATTATTTGGTTCGTTACATTTTCATATCATATTTTTCAATGTCAAGTCCGATCCTTGCACAAGATT
GGAGCAGCATAACTCGACCGAACCAACCATTTTCTCCTAAAAGTGAGTGGAAAGAAGTCGATGAGGGCGGCTATAAGTTGATCGTCAATCTTCCAGGTTTTTCGAAAGAC
CAAGTACGAATCAACCTGCATACAAGCTCGAGGCTTCTTATAATTATGGGACAAAAGACCGATGGCTATAGTGTCAAACGTTTGAATGAGCGCATAAAAATTGGTGATAA
ATGTCCAATAGATGAAGTTTGTGCAAGCTTAGAGTATGATGATCTTGTTGTTACGTTCCATCCAAAAAAAACAAGATCCTAATTCCATCCAATTCAAGATTTGCCTTGTT
AATTAGTGAATAAATGCCAAACCATTATGTAATCCACAATAGACTAAGTTCATGTGGAAGATTGTGATGTTATGATCATGTAGAACAAAATGTAATATTAAATCAACTTA
TGTGGTCGTGGAATGAATACTATATGGTTTGTTTTTCAATGGTAATAAATGAGATTTTACTTGCAAA
Protein sequenceShow/hide protein sequence
MSSPILAQDWSSITRPNQPFSPKSEWKEVDEGGYKLIVNLPGFSKDQVRINLHTSSRLLIIMGQKTDGYSVKRLNERIKIGDKCPIDEVCASLEYDDLVVTFHPKKTRS