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Sed0024226 (gene) of Chayote v1 genome

Gene IDSed0024226
OrganismSechium edule (Chayote v1)
DescriptionRNA-binding protein
Genome locationLG07:34027623..34031690
RNA-Seq ExpressionSed0024226
SyntenySed0024226
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601448.1 Galactoside 2-alpha-L-fucosyltransferase, partial [Cucurbita argyrosperma subsp. sororia]2.0e-9294.65Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRVDGTVKTITLPEDVYVKKFFQKYPDSKYQDPIKFCSFDPVPARIFGLRVLELKEQGVSEE
        MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPR+DGT+KTITLPEDVYVKKFFQK+PDSKY+D IKFCSFDP PARIFGLRVLELKEQGVSEE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRVDGTVKTITLPEDVYVKKFFQKYPDSKYQDPIKFCSFDPVPARIFGLRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKEIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEEREAEMRDRMQGSG
        EAMAVANMEYRAEKKAKKKAYSRLK+IARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEER AEM+DRM+GSG
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKEIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEEREAEMRDRMQGSG
KAG7032230.1 hypothetical protein SDJN02_06273 [Cucurbita argyrosperma subsp. argyrosperma]5.7e-9294.12Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRVDGTVKTITLPEDVYVKKFFQKYPDSKYQDPIKFCSFDPVPARIFGLRVLELKEQGVSEE
        MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPR+DGT+KTITLPEDVYV+KFFQK+PDSKY+D IKFCSFDP PARIFGLRVLELKEQGVSEE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRVDGTVKTITLPEDVYVKKFFQKYPDSKYQDPIKFCSFDPVPARIFGLRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKEIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEEREAEMRDRMQGSG
        EAMAVANMEYRAEKKAKKKAYSRLK+IARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEER AEM+DRM+GSG
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKEIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEEREAEMRDRMQGSG
XP_022151151.1 uncharacterized protein LOC111019147 [Momordica charantia]1.2e-8991.44Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRVDGTVKTITLPEDVYVKKFFQKYPDSKYQDPIKFCSFDPVPARIFGLRVLELKEQGVSEE
        MSFMKGDLL RTRKLVKGLAKAEP+WLKAMEQAPPPTFPRVDGT+KTI+LPEDVYVKKFFQK+PDSKY+D IKFCSFDP PARIFGLRVLELKEQGV EE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRVDGTVKTITLPEDVYVKKFFQKYPDSKYQDPIKFCSFDPVPARIFGLRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKEIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEEREAEMRDRMQGSG
        EAMAVANMEYRAEKK KKKAY+RLK+IARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEER AEM+DRM+G G
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKEIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEEREAEMRDRMQGSG
XP_022957544.1 uncharacterized protein LOC111458914 [Cucurbita moschata]2.0e-9294.65Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRVDGTVKTITLPEDVYVKKFFQKYPDSKYQDPIKFCSFDPVPARIFGLRVLELKEQGVSEE
        MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPR+DGT+KTITLPEDVYVKKFFQK+PDSKY+D IKFCSFDP PARIFGLRVLELKEQGVSEE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRVDGTVKTITLPEDVYVKKFFQKYPDSKYQDPIKFCSFDPVPARIFGLRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKEIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEEREAEMRDRMQGSG
        EAMAVANMEYRAEKKAKKKAYSRLK+IARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEER AEM+DRM+GSG
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKEIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEEREAEMRDRMQGSG
XP_022996766.1 uncharacterized protein LOC111491881 [Cucurbita maxima]1.7e-9194.12Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRVDGTVKTITLPEDVYVKKFFQKYPDSKYQDPIKFCSFDPVPARIFGLRVLELKEQGVSEE
        MSFMKGDLL+RTRKLVKGLAKAEPIWLKAMEQAPPPTFPR+DG VKTITLPEDVYVKKFFQK+PDSKY+D IKFCSFDP PARIFGLRVLELKEQGVSEE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRVDGTVKTITLPEDVYVKKFFQKYPDSKYQDPIKFCSFDPVPARIFGLRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKEIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEEREAEMRDRMQGSG
        EAMAVANMEYRAEKKAKKKAYSRLK+IARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEER AEM+DRM+GSG
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKEIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEEREAEMRDRMQGSG
TrEMBL top hitse value%identityAlignment
A0A1S3BEG4 uncharacterized protein LOC1034891465.8e-8285.95Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRVDGTVKTITLPEDVYVKKFFQKYPDSKYQDPIKFCSFDPVPARIFGLRVLELKEQGVSEE
        MSFMKGDLLT+TRKLVKGLAKAEP+WLKAMEQAPPPTFPRVDG V+ ITLPEDVYVKKFFQK+PDS Y D IKF  F+PVPARIF  RVLELKEQGVSEE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRVDGTVKTITLPEDVYVKKFFQKYPDSKYQDPIKFCSFDPVPARIFGLRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKEIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEEREAEMRDRMQG
        EAMA ANMEYRAEKK KKKAYSRLK+IARLQGKKPPPNP+PSAIK+IQAEERK+VRDRFFNPKIKEIAQRLKEE+ AEM++R +G
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKEIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEEREAEMRDRMQG
A0A5A7SZA7 Uncharacterized protein5.8e-8285.95Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRVDGTVKTITLPEDVYVKKFFQKYPDSKYQDPIKFCSFDPVPARIFGLRVLELKEQGVSEE
        MSFMKGDLLT+TRKLVKGLAKAEP+WLKAMEQAPPPTFPRVDG V+ ITLPEDVYVKKFFQK+PDS Y D IKF  F+PVPARIF  RVLELKEQGVSEE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRVDGTVKTITLPEDVYVKKFFQKYPDSKYQDPIKFCSFDPVPARIFGLRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKEIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEEREAEMRDRMQG
        EAMA ANMEYRAEKK KKKAYSRLK+IARLQGKKPPPNP+PSAIK+IQAEERK+VRDRFFNPKIKEIAQRLKEE+ AEM++R +G
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKEIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEEREAEMRDRMQG
A0A6J1DDQ7 uncharacterized protein LOC1110191475.8e-9091.44Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRVDGTVKTITLPEDVYVKKFFQKYPDSKYQDPIKFCSFDPVPARIFGLRVLELKEQGVSEE
        MSFMKGDLL RTRKLVKGLAKAEP+WLKAMEQAPPPTFPRVDGT+KTI+LPEDVYVKKFFQK+PDSKY+D IKFCSFDP PARIFGLRVLELKEQGV EE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRVDGTVKTITLPEDVYVKKFFQKYPDSKYQDPIKFCSFDPVPARIFGLRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKEIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEEREAEMRDRMQGSG
        EAMAVANMEYRAEKK KKKAY+RLK+IARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEER AEM+DRM+G G
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKEIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEEREAEMRDRMQGSG
A0A6J1GZF0 uncharacterized protein LOC1114589149.6e-9394.65Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRVDGTVKTITLPEDVYVKKFFQKYPDSKYQDPIKFCSFDPVPARIFGLRVLELKEQGVSEE
        MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPR+DGT+KTITLPEDVYVKKFFQK+PDSKY+D IKFCSFDP PARIFGLRVLELKEQGVSEE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRVDGTVKTITLPEDVYVKKFFQKYPDSKYQDPIKFCSFDPVPARIFGLRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKEIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEEREAEMRDRMQGSG
        EAMAVANMEYRAEKKAKKKAYSRLK+IARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEER AEM+DRM+GSG
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKEIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEEREAEMRDRMQGSG
A0A6J1KC52 uncharacterized protein LOC1114918818.1e-9294.12Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRVDGTVKTITLPEDVYVKKFFQKYPDSKYQDPIKFCSFDPVPARIFGLRVLELKEQGVSEE
        MSFMKGDLL+RTRKLVKGLAKAEPIWLKAMEQAPPPTFPR+DG VKTITLPEDVYVKKFFQK+PDSKY+D IKFCSFDP PARIFGLRVLELKEQGVSEE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRVDGTVKTITLPEDVYVKKFFQKYPDSKYQDPIKFCSFDPVPARIFGLRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKEIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEEREAEMRDRMQGSG
        EAMAVANMEYRAEKKAKKKAYSRLK+IARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEER AEM+DRM+GSG
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKEIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEEREAEMRDRMQGSG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G26750.1 unknown protein1.2e-5254.3Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRVDGTVKTITLPEDVYVKKFFQKYPDSKYQDPIKFCSFDPVPARIFGLRVLELKEQGVSEE
        MS+MKGDLL++TR+LV GLA  EP+WLKAME +PPP FPR +G ++ I LPED YV+KF  K+P +K  DP K  +F P  AR++G RVLELKE G+SE 
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRVDGTVKTITLPEDVYVKKFFQKYPDSKYQDPIKFCSFDPVPARIFGLRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKEIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEEREAEMRDRMQGS
        +AM+VANMEY +E+K  KKAY RLKE+A +Q K PPP PYPSA K +  + +   +DRF  P ++ +  +LK E++  ++DR  GS
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKEIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEEREAEMRDRMQGS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTTCATGAAAGGAGATTTGTTAACCAGGACAAGAAAGCTCGTCAAGGGCTTGGCCAAAGCAGAACCCATTTGGCTCAAAGCTATGGAACAGGCGCCACCTCCTAC
ATTTCCTCGAGTAGATGGAACCGTCAAGACAATCACTCTTCCTGAGGATGTTTATGTCAAAAAGTTCTTCCAGAAATATCCAGATTCAAAATACCAAGATCCTATCAAGT
TCTGTAGTTTTGATCCTGTTCCAGCCCGAATATTTGGCTTGCGGGTCCTTGAACTGAAGGAACAGGGTGTCAGTGAGGAGGAAGCCATGGCAGTAGCCAATATGGAATAC
CGGGCCGAGAAAAAGGCGAAAAAGAAGGCCTACTCTCGCTTGAAGGAGATTGCTCGTCTTCAAGGGAAAAAGCCTCCGCCTAACCCTTATCCAAGTGCTATTAAGGAGAT
CCAAGCCGAGGAAAGGAAATTCGTCCGGGATCGTTTCTTCAACCCCAAGATTAAAGAGATTGCGCAGAGGTTGAAGGAAGAGAGGGAAGCTGAAATGCGGGACAGAATGC
AAGGCAGTGGCTGA
mRNA sequenceShow/hide mRNA sequence
AGCGGCTCGGTTTCCGGCGATTTTCCAATAAAATCCTTATTGCGCAATTGTGTACTGGAGATTAGCTGAAGGTCTGAAGTTTCATCGTCGTCGTAGCGTACGTGTCTGCC
TCTTTTCTTTTCTGTAAACCATCGGAGCCATGTCGTTCATGAAAGGAGATTTGTTAACCAGGACAAGAAAGCTCGTCAAGGGCTTGGCCAAAGCAGAACCCATTTGGCTC
AAAGCTATGGAACAGGCGCCACCTCCTACATTTCCTCGAGTAGATGGAACCGTCAAGACAATCACTCTTCCTGAGGATGTTTATGTCAAAAAGTTCTTCCAGAAATATCC
AGATTCAAAATACCAAGATCCTATCAAGTTCTGTAGTTTTGATCCTGTTCCAGCCCGAATATTTGGCTTGCGGGTCCTTGAACTGAAGGAACAGGGTGTCAGTGAGGAGG
AAGCCATGGCAGTAGCCAATATGGAATACCGGGCCGAGAAAAAGGCGAAAAAGAAGGCCTACTCTCGCTTGAAGGAGATTGCTCGTCTTCAAGGGAAAAAGCCTCCGCCT
AACCCTTATCCAAGTGCTATTAAGGAGATCCAAGCCGAGGAAAGGAAATTCGTCCGGGATCGTTTCTTCAACCCCAAGATTAAAGAGATTGCGCAGAGGTTGAAGGAAGA
GAGGGAAGCTGAAATGCGGGACAGAATGCAAGGCAGTGGCTGATGGTGAAGAGTAATTAACTTAAGGAAACTAGCTTTTGCAATAATTTTGGTAGTTTACCAATTGAGAA
TAACTGCAATTCTTGCATTCAAGGGAATACCATTGCAGAAGCATTGGTTTAAACATGCTGAAATATTTTCTTTTGTTCATTGCTGTTTTGATTAAAGTTTTGTTTCATAG
AAGAACGTTGCTACATTATTCAACAATGCCCGATGATGCTGTCATAAGGTGGCGATGGCCTCCCTAGGTAATGCCAATAACATTTTAATGATTGAATCAATTCAATATAG
ATATAATTTCTTAA
Protein sequenceShow/hide protein sequence
MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRVDGTVKTITLPEDVYVKKFFQKYPDSKYQDPIKFCSFDPVPARIFGLRVLELKEQGVSEEEAMAVANMEY
RAEKKAKKKAYSRLKEIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEEREAEMRDRMQGSG