; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0024245 (gene) of Chayote v1 genome

Gene IDSed0024245
OrganismSechium edule (Chayote v1)
DescriptionF-box protein
Genome locationLG12:6808429..6811132
RNA-Seq ExpressionSed0024245
SyntenySed0024245
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581651.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia]5.6e-5568.75Show/hide
Query:  MFYLFISCLSFILLSKSFSCKRLPPWEAKMSLLSAFLVSWFHKGRLALSFLQVLKVPDPPLKNITCSAKLENLEKEKGTSFLDLPELALESILYRLSPSK
        MFYL IS LSFILLSKSFS KRLPPWEAKMSL S FL++WFHKG L+LSF Q+  + DPPLK    S KLE+ +++KGTS LDLP LALESIL RLSPS 
Subjt:  MFYLFISCLSFILLSKSFSCKRLPPWEAKMSLLSAFLVSWFHKGRLALSFLQVLKVPDPPLKNITCSAKLENLEKEKGTSFLDLPELALESILYRLSPSK

Query:  LCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREWHLDIDLRRRSKLSSPSHKK
        LCKMANVCT+LR+ CE++Y W+K M QKWG L+GNSAC++WHL I  +RRSKLS+PS  +
Subjt:  LCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREWHLDIDLRRRSKLSSPSHKK

KAG7018144.1 F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma]5.6e-5568.75Show/hide
Query:  MFYLFISCLSFILLSKSFSCKRLPPWEAKMSLLSAFLVSWFHKGRLALSFLQVLKVPDPPLKNITCSAKLENLEKEKGTSFLDLPELALESILYRLSPSK
        MFYL IS LSFILLSKSFS KRLPPWEAKMSL S FL++WFHKG L+LSF Q+  + DPPLK    S KLE+ +++KGTS LDLP LALESIL RLSPS 
Subjt:  MFYLFISCLSFILLSKSFSCKRLPPWEAKMSLLSAFLVSWFHKGRLALSFLQVLKVPDPPLKNITCSAKLENLEKEKGTSFLDLPELALESILYRLSPSK

Query:  LCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREWHLDIDLRRRSKLSSPSHKK
        LCKMANVCT+LR+ CE++Y W+K M QKWG L+GNSAC++WHL I  +RRSKLS+PS  +
Subjt:  LCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREWHLDIDLRRRSKLSSPSHKK

XP_004141125.1 F-box protein At2g26850 [Cucumis sativus]2.7e-6274.7Show/hide
Query:  MFYLFISCLSFILLSKSFSCKRLPPWEAKMSLLSAFLVSWFHKGRLALSFLQVLKVPDPPLKNITCSAKLENLEKEKGTSFLDLPELALESILYRLSPSK
        M YL IS LSFILLSKSFS KRL PWE KMSLL+A LVSWFHK +LALSF  VLKV DP LK+I CS KL NLE+++GTS LDLPELALESIL RLSPS+
Subjt:  MFYLFISCLSFILLSKSFSCKRLPPWEAKMSLLSAFLVSWFHKGRLALSFLQVLKVPDPPLKNITCSAKLENLEKEKGTSFLDLPELALESILYRLSPSK

Query:  LCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREWHLDIDLRRRSKLSSPSHKKDNYIAY
        LC+MANVCTYLRDVCE+DYFW+KHMKQKWGKLMGNSA +EWHL I  +RRSKL+S   KK  + +Y
Subjt:  LCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREWHLDIDLRRRSKLSSPSHKKDNYIAY

XP_008464952.1 PREDICTED: F-box protein At2g26850-like [Cucumis melo]3.6e-6274.1Show/hide
Query:  MFYLFISCLSFILLSKSFSCKRLPPWEAKMSLLSAFLVSWFHKGRLALSFLQVLKVPDPPLKNITCSAKLENLEKEKGTSFLDLPELALESILYRLSPSK
        MFYL IS LSFILLSKSFS KRL PWEAKMS L+A LVSWFHK +LALSF  VLKV DP LK+  CSAK  NLE+E+ TS LDLPELALES+L RLSPS+
Subjt:  MFYLFISCLSFILLSKSFSCKRLPPWEAKMSLLSAFLVSWFHKGRLALSFLQVLKVPDPPLKNITCSAKLENLEKEKGTSFLDLPELALESILYRLSPSK

Query:  LCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREWHLDIDLRRRSKLSSPSHKKDNYIAY
        LC+MANVCTYLRDVCE+DYFW+KHMKQKWGKLMGNSAC+EWHL I  +RRSKL++   KK  + +Y
Subjt:  LCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREWHLDIDLRRRSKLSSPSHKKDNYIAY

XP_038903122.1 F-box protein At2g26850-like [Benincasa hispida]5.5e-6376.05Show/hide
Query:  MFYLFISCLSFILLSKSFSCKRLPPWEAKMSLLSAFLVSWFHKGRLALSFLQVLKVPDPPLKN-ITCSAKLENLEKEKGTSFLDLPELALESILYRLSPS
        MFYL IS LSFILLSKSFS KRL PWEAKMSLL+A L+SWFHK RLAL+F QVL V DPPL + ITCS KL NLE+ +G S LDLP+LALESIL RLSPS
Subjt:  MFYLFISCLSFILLSKSFSCKRLPPWEAKMSLLSAFLVSWFHKGRLALSFLQVLKVPDPPLKN-ITCSAKLENLEKEKGTSFLDLPELALESILYRLSPS

Query:  KLCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREWHLDIDLRRRSKLSSPSHKKDNYIAY
        +LCKMANVCTYLRDVCE+DYFW+KHMKQKWG LMGNSA +EWHL I L+RRS+LSSPS KK  + +Y
Subjt:  KLCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREWHLDIDLRRRSKLSSPSHKKDNYIAY

TrEMBL top hitse value%identityAlignment
A0A0A0LD57 F-box domain-containing protein1.3e-6274.7Show/hide
Query:  MFYLFISCLSFILLSKSFSCKRLPPWEAKMSLLSAFLVSWFHKGRLALSFLQVLKVPDPPLKNITCSAKLENLEKEKGTSFLDLPELALESILYRLSPSK
        M YL IS LSFILLSKSFS KRL PWE KMSLL+A LVSWFHK +LALSF  VLKV DP LK+I CS KL NLE+++GTS LDLPELALESIL RLSPS+
Subjt:  MFYLFISCLSFILLSKSFSCKRLPPWEAKMSLLSAFLVSWFHKGRLALSFLQVLKVPDPPLKNITCSAKLENLEKEKGTSFLDLPELALESILYRLSPSK

Query:  LCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREWHLDIDLRRRSKLSSPSHKKDNYIAY
        LC+MANVCTYLRDVCE+DYFW+KHMKQKWGKLMGNSA +EWHL I  +RRSKL+S   KK  + +Y
Subjt:  LCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREWHLDIDLRRRSKLSSPSHKKDNYIAY

A0A1S3CP96 F-box protein At2g26850-like1.7e-6274.1Show/hide
Query:  MFYLFISCLSFILLSKSFSCKRLPPWEAKMSLLSAFLVSWFHKGRLALSFLQVLKVPDPPLKNITCSAKLENLEKEKGTSFLDLPELALESILYRLSPSK
        MFYL IS LSFILLSKSFS KRL PWEAKMS L+A LVSWFHK +LALSF  VLKV DP LK+  CSAK  NLE+E+ TS LDLPELALES+L RLSPS+
Subjt:  MFYLFISCLSFILLSKSFSCKRLPPWEAKMSLLSAFLVSWFHKGRLALSFLQVLKVPDPPLKNITCSAKLENLEKEKGTSFLDLPELALESILYRLSPSK

Query:  LCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREWHLDIDLRRRSKLSSPSHKKDNYIAY
        LC+MANVCTYLRDVCE+DYFW+KHMKQKWGKLMGNSAC+EWHL I  +RRSKL++   KK  + +Y
Subjt:  LCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREWHLDIDLRRRSKLSSPSHKKDNYIAY

A0A5D3D5D1 F-box protein1.7e-6274.1Show/hide
Query:  MFYLFISCLSFILLSKSFSCKRLPPWEAKMSLLSAFLVSWFHKGRLALSFLQVLKVPDPPLKNITCSAKLENLEKEKGTSFLDLPELALESILYRLSPSK
        MFYL IS LSFILLSKSFS KRL PWEAKMS L+A LVSWFHK +LALSF  VLKV DP LK+  CSAK  NLE+E+ TS LDLPELALES+L RLSPS+
Subjt:  MFYLFISCLSFILLSKSFSCKRLPPWEAKMSLLSAFLVSWFHKGRLALSFLQVLKVPDPPLKNITCSAKLENLEKEKGTSFLDLPELALESILYRLSPSK

Query:  LCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREWHLDIDLRRRSKLSSPSHKKDNYIAY
        LC+MANVCTYLRDVCE+DYFW+KHMKQKWGKLMGNSAC+EWHL I  +RRSKL++   KK  + +Y
Subjt:  LCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREWHLDIDLRRRSKLSSPSHKKDNYIAY

A0A6J1ERD4 F-box protein At2g26850-like4.6e-5568.12Show/hide
Query:  MFYLFISCLSFILLSKSFSCKRLPPWEAKMSLLSAFLVSWFHKGRLALSFLQVLKVPDPPLKNITCSAKLENLEKEKGTSFLDLPELALESILYRLSPSK
        MFYL IS LSFILLSKSFS KRLPPWEAKMSL S FL++WFHKG L+LSF Q+  + DPPLK    S KLE+ +++KGTS LDLP LALESIL RLSPS 
Subjt:  MFYLFISCLSFILLSKSFSCKRLPPWEAKMSLLSAFLVSWFHKGRLALSFLQVLKVPDPPLKNITCSAKLENLEKEKGTSFLDLPELALESILYRLSPSK

Query:  LCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREWHLDIDLRRRSKLSSPSHKK
        LCKMANVCT+LR+ CE++Y W+K M QKWG L+GNSAC++WH+ I  +RRSKLS+PS  +
Subjt:  LCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREWHLDIDLRRRSKLSSPSHKK

A0A6J1IU61 F-box protein At2g26850-like2.3e-5467.5Show/hide
Query:  MFYLFISCLSFILLSKSFSCKRLPPWEAKMSLLSAFLVSWFHKGRLALSFLQVLKVPDPPLKNITCSAKLENLEKEKGTSFLDLPELALESILYRLSPSK
        MFYL +S LSFILLSKSFS KRLPPWEAKMSL S FL+SWFHKG LALSF Q+  + DPPLK    S KLE+ +++KGTS LDLP L LE+IL RLSPS 
Subjt:  MFYLFISCLSFILLSKSFSCKRLPPWEAKMSLLSAFLVSWFHKGRLALSFLQVLKVPDPPLKNITCSAKLENLEKEKGTSFLDLPELALESILYRLSPSK

Query:  LCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREWHLDIDLRRRSKLSSPSHKK
        LCKMANVCT+LR+VCE+++ W+K M QKWG L+G+SAC++WHL I  +RRSKLS+PS  +
Subjt:  LCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREWHLDIDLRRRSKLSSPSHKK

SwissProt top hitse value%identityAlignment
Q6NKN8 F-box protein At2g411705.1e-1946.73Show/hide
Query:  KLENLEKEKGTSFLDLPELALESILYRLSPSKLCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREW--HLDIDLRRRSKLSSPSHK-KDNYIA
        K +N E E   S LDLP+L L+ IL +LSPS+LC M +VC+ LRD C  D+ W+KHM+ KWG+LMG++A +EW  H+   +R  +  SS S K K N+ +
Subjt:  KLENLEKEKGTSFLDLPELALESILYRLSPSKLCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREW--HLDIDLRRRSKLSSPSHK-KDNYIA

Query:  YEAYRLK
             LK
Subjt:  YEAYRLK

Q6NLB1 F-box protein At2g268502.3e-1940.88Show/hide
Query:  MFYLFISCLSFILLSKSFSCKRLPPWEAKMSLLSAFLVSWFHKGRLALSFLQVLKVPDPPLKNITCSAKLENLEKEKGTSFLDLPELALESILYRLSPSK
        + YL I+CLSF   SKS S    P W +K   L +F   +F K     S  Q+   PD        S  L  +      S LDLP+L L+ IL  L PS+
Subjt:  MFYLFISCLSFILLSKSFSCKRLPPWEAKMSLLSAFLVSWFHKGRLALSFLQVLKVPDPPLKNITCSAKLENLEKEKGTSFLDLPELALESILYRLSPSK

Query:  LCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREWHLDIDLRRRSKLSSPSHK
        LC MA VC+ LR+ C  D+ W+KH+K KWGK++G SA +EW     L     L SP HK
Subjt:  LCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREWHLDIDLRRRSKLSSPSHK

Q8RY82 F-box protein At2g325602.7e-2038.89Show/hide
Query:  MFYLFISCLSFILLSKSFSCKRLPPWEAKMSLLSAFLVSWFHKGRLALSFLQVLKVPDPPLKNITCSAKLENLEKEKGTSFLDLPELALESILYRLSPSK
        + Y  I+CLSF   +KS S   LPPW ++   L +F   +F K     +  Q    P  P+ +                S LDLPELAL+ IL  L PS 
Subjt:  MFYLFISCLSFILLSKSFSCKRLPPWEAKMSLLSAFLVSWFHKGRLALSFLQVLKVPDPPLKNITCSAKLENLEKEKGTSFLDLPELALESILYRLSPSK

Query:  LCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREWHLDIDLRRRSKLSSPSHKKDN
        LC MA VC+ LR+ C  D+ W+KH+K KWGK++G +A REW   I       L SP H+  N
Subjt:  LCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREWHLDIDLRRRSKLSSPSHKKDN

Arabidopsis top hitse value%identityAlignment
AT2G26850.1 F-box family protein1.6e-2040.88Show/hide
Query:  MFYLFISCLSFILLSKSFSCKRLPPWEAKMSLLSAFLVSWFHKGRLALSFLQVLKVPDPPLKNITCSAKLENLEKEKGTSFLDLPELALESILYRLSPSK
        + YL I+CLSF   SKS S    P W +K   L +F   +F K     S  Q+   PD        S  L  +      S LDLP+L L+ IL  L PS+
Subjt:  MFYLFISCLSFILLSKSFSCKRLPPWEAKMSLLSAFLVSWFHKGRLALSFLQVLKVPDPPLKNITCSAKLENLEKEKGTSFLDLPELALESILYRLSPSK

Query:  LCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREWHLDIDLRRRSKLSSPSHK
        LC MA VC+ LR+ C  D+ W+KH+K KWGK++G SA +EW     L     L SP HK
Subjt:  LCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREWHLDIDLRRRSKLSSPSHK

AT2G32560.1 F-box family protein1.9e-2138.89Show/hide
Query:  MFYLFISCLSFILLSKSFSCKRLPPWEAKMSLLSAFLVSWFHKGRLALSFLQVLKVPDPPLKNITCSAKLENLEKEKGTSFLDLPELALESILYRLSPSK
        + Y  I+CLSF   +KS S   LPPW ++   L +F   +F K     +  Q    P  P+ +                S LDLPELAL+ IL  L PS 
Subjt:  MFYLFISCLSFILLSKSFSCKRLPPWEAKMSLLSAFLVSWFHKGRLALSFLQVLKVPDPPLKNITCSAKLENLEKEKGTSFLDLPELALESILYRLSPSK

Query:  LCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREWHLDIDLRRRSKLSSPSHKKDN
        LC MA VC+ LR+ C  D+ W+KH+K KWGK++G +A REW   I       L SP H+  N
Subjt:  LCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREWHLDIDLRRRSKLSSPSHKKDN

AT2G41170.1 F-box family protein3.6e-2046.73Show/hide
Query:  KLENLEKEKGTSFLDLPELALESILYRLSPSKLCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREW--HLDIDLRRRSKLSSPSHK-KDNYIA
        K +N E E   S LDLP+L L+ IL +LSPS+LC M +VC+ LRD C  D+ W+KHM+ KWG+LMG++A +EW  H+   +R  +  SS S K K N+ +
Subjt:  KLENLEKEKGTSFLDLPELALESILYRLSPSKLCKMANVCTYLRDVCEEDYFWDKHMKQKWGKLMGNSACREW--HLDIDLRRRSKLSSPSHK-KDNYIA

Query:  YEAYRLK
             LK
Subjt:  YEAYRLK

AT5G21040.1 F-box protein 21.6e-0431.58Show/hide
Query:  EKEKGTSFLDLPELALESILYRLSPSKLCKMANVCTYLRDVCEEDYFWDKHMKQKWG
        +K+  T+ +DLP+  +  IL  L P +L  ++ V TYL  +  E + W +  +++WG
Subjt:  EKEKGTSFLDLPELALESILYRLSPSKLCKMANVCTYLRDVCEEDYFWDKHMKQKWG

AT5G21040.2 F-box protein 21.6e-0431.58Show/hide
Query:  EKEKGTSFLDLPELALESILYRLSPSKLCKMANVCTYLRDVCEEDYFWDKHMKQKWG
        +K+  T+ +DLP+  +  IL  L P +L  ++ V TYL  +  E + W +  +++WG
Subjt:  EKEKGTSFLDLPELALESILYRLSPSKLCKMANVCTYLRDVCEEDYFWDKHMKQKWG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTATCTTTTCATCTCTTGCCTTTCCTTCATCCTTCTCTCCAAGTCCTTCTCTTGCAAACGGCTACCGCCATGGGAGGCCAAGATGAGCTTGCTCTCTGCTTTCCT
TGTATCATGGTTCCACAAGGGTAGGCTTGCTTTGAGTTTCTTGCAAGTTCTAAAGGTCCCTGATCCGCCATTGAAGAACATCACATGTAGCGCAAAACTAGAGAATTTAG
AGAAGGAAAAAGGGACTTCCTTCTTGGATTTGCCCGAGTTGGCTCTGGAATCGATTCTCTACCGGCTTTCGCCATCGAAGTTGTGTAAGATGGCAAATGTGTGTACTTAT
TTGAGGGATGTTTGTGAAGAGGATTATTTCTGGGATAAGCACATGAAGCAGAAATGGGGGAAGTTGATGGGTAATTCTGCTTGTAGAGAATGGCATTTGGATATAGATCT
TAGGAGAAGATCAAAGCTCTCAAGTCCATCTCACAAGAAAGATAACTACATAGCATATGAAGCTTATCGATTGAAGAAGATGCACTGCGATGATCCTATAAAGGACTTTA
TGAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTTATCTTTTCATCTCTTGCCTTTCCTTCATCCTTCTCTCCAAGTCCTTCTCTTGCAAACGGCTACCGCCATGGGAGGCCAAGATGAGCTTGCTCTCTGCTTTCCT
TGTATCATGGTTCCACAAGGGTAGGCTTGCTTTGAGTTTCTTGCAAGTTCTAAAGGTCCCTGATCCGCCATTGAAGAACATCACATGTAGCGCAAAACTAGAGAATTTAG
AGAAGGAAAAAGGGACTTCCTTCTTGGATTTGCCCGAGTTGGCTCTGGAATCGATTCTCTACCGGCTTTCGCCATCGAAGTTGTGTAAGATGGCAAATGTGTGTACTTAT
TTGAGGGATGTTTGTGAAGAGGATTATTTCTGGGATAAGCACATGAAGCAGAAATGGGGGAAGTTGATGGGTAATTCTGCTTGTAGAGAATGGCATTTGGATATAGATCT
TAGGAGAAGATCAAAGCTCTCAAGTCCATCTCACAAGAAAGATAACTACATAGCATATGAAGCTTATCGATTGAAGAAGATGCACTGCGATGATCCTATAAAGGACTTTA
TGAACTAG
Protein sequenceShow/hide protein sequence
MFYLFISCLSFILLSKSFSCKRLPPWEAKMSLLSAFLVSWFHKGRLALSFLQVLKVPDPPLKNITCSAKLENLEKEKGTSFLDLPELALESILYRLSPSKLCKMANVCTY
LRDVCEEDYFWDKHMKQKWGKLMGNSACREWHLDIDLRRRSKLSSPSHKKDNYIAYEAYRLKKMHCDDPIKDFMN