CuGenDBv2

Gene ID	Sed0024280
Organism	Sechium edule (Chayote v1)
Description	Transcription factor bHLH14
Genome location	LG05:42522762..42525099
RNA-Seq Expression	Sed0024280
Synteny	Sed0024280
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7035319.1 hypothetical protein SDJN02_02114, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.1e-58

88.97

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Query:  MSFLWEKSESWRWIVRKTRDSKPFFFAFATVCGVVPGVIGYCVMQATNSGNDQLEARLRQNARPDSLMMAKANRERLAEYLGELQRKEDTNDRYVAALRG
        MSFLWEKSESWRWIVRKTRDSKPFF AFATVCGVVPGVIGYCVMQATNS N+QLEARLRQNARP+SLMM + NRERLAEYLGELQRKEDTNDRYVAALRG
Subjt:  MSFLWEKSESWRWIVRKTRDSKPFFFAFATVCGVVPGVIGYCVMQATNSGNDQLEARLRQNARPDSLMMAKANRERLAEYLGELQRKEDTNDRYVAALRG

Query:  ETLTRKPYERIQPIP-NQSNDASVSGKEQQVKKENK
        ETLTRKPY RIQPIP NQSN+  V+ K QQVKKENK
Subjt:  ETLTRKPYERIQPIP-NQSNDASVSGKEQQVKKENK

XP_022149659.1 uncharacterized protein LOC111018036 [Momordica charantia]

3.9e-58

85.93

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Query:  MSFLWEKSESWRWIVRKTRDSKPFFFAFATVCGVVPGVIGYCVMQATNSGNDQLEARLRQNARPDSLMMAKANRERLAEYLGELQRKEDTNDRYVAALRG
        MSFLWEKSE+WRW+VRKTRDSKPFFFAFATVCGVVPGVIGYCVMQATNS N+QLEARLRQNARP+SLMM + NRERLAEYLGELQRKEDTNDRYVAAL+G
Subjt:  MSFLWEKSESWRWIVRKTRDSKPFFFAFATVCGVVPGVIGYCVMQATNSGNDQLEARLRQNARPDSLMMAKANRERLAEYLGELQRKEDTNDRYVAALRG

Query:  ETLTRKPYERIQPIPNQSNDASVSGKEQQVKKENK
        ETLTRKPY RIQPIP + NDA  + KEQ++KKENK
Subjt:  ETLTRKPYERIQPIPNQSNDASVSGKEQQVKKENK

XP_022947349.1 uncharacterized protein LOC111451237 [Cucurbita moschata]

5.1e-58

88.97

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Query:  MSFLWEKSESWRWIVRKTRDSKPFFFAFATVCGVVPGVIGYCVMQATNSGNDQLEARLRQNARPDSLMMAKANRERLAEYLGELQRKEDTNDRYVAALRG
        MSFLWEKSESWRWIVRKTRDSKPFF AFATVCGVVPGVIGYCVMQATNS N+QLEARLRQNARP+SLMM + NRERLAEYLGELQRKEDTNDRYVAALRG
Subjt:  MSFLWEKSESWRWIVRKTRDSKPFFFAFATVCGVVPGVIGYCVMQATNSGNDQLEARLRQNARPDSLMMAKANRERLAEYLGELQRKEDTNDRYVAALRG

Query:  ETLTRKPYERIQPI-PNQSNDASVSGKEQQVKKENK
        ETLTRKPY RIQPI PNQSN+  V+ K QQVKKENK
Subjt:  ETLTRKPYERIQPI-PNQSNDASVSGKEQQVKKENK

XP_023007266.1 uncharacterized protein LOC111499804 [Cucurbita maxima]

7.9e-59

88.89

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Query:  MSFLWEKSESWRWIVRKTRDSKPFFFAFATVCGVVPGVIGYCVMQATNSGNDQLEARLRQNARPDSLMMAKANRERLAEYLGELQRKEDTNDRYVAALRG
        MSFLWEKSESWRWIVRKTRDSKPFF AFATVCGVVPGVIGYCVMQATNS N+QLEARLRQNARP+SLMM + NRERLAEYLGELQRKEDTNDRYVAALRG
Subjt:  MSFLWEKSESWRWIVRKTRDSKPFFFAFATVCGVVPGVIGYCVMQATNSGNDQLEARLRQNARPDSLMMAKANRERLAEYLGELQRKEDTNDRYVAALRG

Query:  ETLTRKPYERIQPIPNQSNDASVSGKEQQVKKENK
        ETLTRKPY RIQPIP+QSN+  V+ K QQVKKENK
Subjt:  ETLTRKPYERIQPIPNQSNDASVSGKEQQVKKENK

XP_023533278.1 uncharacterized protein LOC111795217 [Cucurbita pepo subsp. pepo]

1.9e-57

88.24

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Query:  MSFLWEKSESWRWIVRKTRDSKPFFFAFATVCGVVPGVIGYCVMQATNSGNDQLEARLRQNARPDSLMMAKANRERLAEYLGELQRKEDTNDRYVAALRG
        MSFLWEKSESWRWIVRKTRDSKPFF AFATVCGVVPGVIGYCVMQATNS N+QLEARLRQNARP+SLMM + NRERLAEYLGELQRKEDTNDRYVAALRG
Subjt:  MSFLWEKSESWRWIVRKTRDSKPFFFAFATVCGVVPGVIGYCVMQATNSGNDQLEARLRQNARPDSLMMAKANRERLAEYLGELQRKEDTNDRYVAALRG

Query:  ETLTRKPYERIQPI-PNQSNDASVSGKEQQVKKENK
        ETLTRKPY RIQPI PNQSN+  V+ K QQVK ENK
Subjt:  ETLTRKPYERIQPI-PNQSNDASVSGKEQQVKKENK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KEE2 Uncharacterized protein

1.2e-57

85.19

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Query:  MSFLWEKSESWRWIVRKTRDSKPFFFAFATVCGVVPGVIGYCVMQATNSGNDQLEARLRQNARPDSLMMAKANRERLAEYLGELQRKEDTNDRYVAALRG
        MS LWEKSE+WRW+VRKTRDSK FFF FATVCG+VPG+IGYCVMQATNS N+QLEARLRQNARP+SLMM + NRERLAEYLGELQRKEDTNDRYVAAL G
Subjt:  MSFLWEKSESWRWIVRKTRDSKPFFFAFATVCGVVPGVIGYCVMQATNSGNDQLEARLRQNARPDSLMMAKANRERLAEYLGELQRKEDTNDRYVAALRG

Query:  ETLTRKPYERIQPIPNQSNDASVSGKEQQVKKENK
        +TLTRKPY RIQPIPNQSNDA+V  KEQQ+KKENK
Subjt:  ETLTRKPYERIQPIPNQSNDASVSGKEQQVKKENK

A0A5A7UJD3 Transcription factor bHLH14

5.2e-56

83.7

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Query:  MSFLWEKSESWRWIVRKTRDSKPFFFAFATVCGVVPGVIGYCVMQATNSGNDQLEARLRQNARPDSLMMAKANRERLAEYLGELQRKEDTNDRYVAALRG
        MS LWEKSE+WRW+VRKTRDSK FFF FAT CG+VP +IGYCVMQATNS N+QLEARLRQNARP+SLMM + NRERLAEYLGELQRKEDTNDRYVAAL G
Subjt:  MSFLWEKSESWRWIVRKTRDSKPFFFAFATVCGVVPGVIGYCVMQATNSGNDQLEARLRQNARPDSLMMAKANRERLAEYLGELQRKEDTNDRYVAALRG

Query:  ETLTRKPYERIQPIPNQSNDASVSGKEQQVKKENK
        +TLTRKPY RIQPIPNQSNDA+V  KEQQ+KKENK
Subjt:  ETLTRKPYERIQPIPNQSNDASVSGKEQQVKKENK

A0A6J1D7P4 uncharacterized protein LOC111018036

1.9e-58

85.93

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Query:  MSFLWEKSESWRWIVRKTRDSKPFFFAFATVCGVVPGVIGYCVMQATNSGNDQLEARLRQNARPDSLMMAKANRERLAEYLGELQRKEDTNDRYVAALRG
        MSFLWEKSE+WRW+VRKTRDSKPFFFAFATVCGVVPGVIGYCVMQATNS N+QLEARLRQNARP+SLMM + NRERLAEYLGELQRKEDTNDRYVAAL+G
Subjt:  MSFLWEKSESWRWIVRKTRDSKPFFFAFATVCGVVPGVIGYCVMQATNSGNDQLEARLRQNARPDSLMMAKANRERLAEYLGELQRKEDTNDRYVAALRG

Query:  ETLTRKPYERIQPIPNQSNDASVSGKEQQVKKENK
        ETLTRKPY RIQPIP + NDA  + KEQ++KKENK
Subjt:  ETLTRKPYERIQPIPNQSNDASVSGKEQQVKKENK

A0A6J1G6J1 uncharacterized protein LOC111451237

2.5e-58

88.97

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Query:  MSFLWEKSESWRWIVRKTRDSKPFFFAFATVCGVVPGVIGYCVMQATNSGNDQLEARLRQNARPDSLMMAKANRERLAEYLGELQRKEDTNDRYVAALRG
        MSFLWEKSESWRWIVRKTRDSKPFF AFATVCGVVPGVIGYCVMQATNS N+QLEARLRQNARP+SLMM + NRERLAEYLGELQRKEDTNDRYVAALRG
Subjt:  MSFLWEKSESWRWIVRKTRDSKPFFFAFATVCGVVPGVIGYCVMQATNSGNDQLEARLRQNARPDSLMMAKANRERLAEYLGELQRKEDTNDRYVAALRG

Query:  ETLTRKPYERIQPI-PNQSNDASVSGKEQQVKKENK
        ETLTRKPY RIQPI PNQSN+  V+ K QQVKKENK
Subjt:  ETLTRKPYERIQPI-PNQSNDASVSGKEQQVKKENK

A0A6J1L027 uncharacterized protein LOC111499804

3.8e-59

88.89

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Query:  MSFLWEKSESWRWIVRKTRDSKPFFFAFATVCGVVPGVIGYCVMQATNSGNDQLEARLRQNARPDSLMMAKANRERLAEYLGELQRKEDTNDRYVAALRG
        MSFLWEKSESWRWIVRKTRDSKPFF AFATVCGVVPGVIGYCVMQATNS N+QLEARLRQNARP+SLMM + NRERLAEYLGELQRKEDTNDRYVAALRG
Subjt:  MSFLWEKSESWRWIVRKTRDSKPFFFAFATVCGVVPGVIGYCVMQATNSGNDQLEARLRQNARPDSLMMAKANRERLAEYLGELQRKEDTNDRYVAALRG

Query:  ETLTRKPYERIQPIPNQSNDASVSGKEQQVKKENK
        ETLTRKPY RIQPIP+QSN+  V+ K QQVKKENK
Subjt:  ETLTRKPYERIQPIPNQSNDASVSGKEQQVKKENK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G79390.1 unknown protein

5.1e-48

71.09

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Query:  MSFLWEKSESWRWIVRKTRDSKPFFFAFATVCGVVPGVIGYCVMQATNSGNDQLEARLRQNARPDSLMMAKANRERLAEYLGELQRKEDTNDRYVAALRG
        MSF++EKS +WRW+V KTRDS+ FFF FA +CGV+PGVIGY VMQ TNS N +LEARLR++ARPD+LMM K N+ERLAEYLGEL++K+DTNDRYVAALRG
Subjt:  MSFLWEKSESWRWIVRKTRDSKPFFFAFATVCGVVPGVIGYCVMQATNSGNDQLEARLRQNARPDSLMMAKANRERLAEYLGELQRKEDTNDRYVAALRG

Query:  ETLTRKPYERIQPIPNQSNDASVSGKEQ
        ETLTRKPY+RIQP+P    D +V+ K Q
Subjt:  ETLTRKPYERIQPIPNQSNDASVSGKEQ

Sequences

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CDS sequence

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ATGTCGTTCCTGTGGGAGAAGAGCGAGTCATGGAGATGGATCGTGAGGAAAACCAGAGACTCCAAGCCTTTCTTCTTCGCCTTCGCCACCGTCTGCGGCGTCGTTCCCGG
CGTCATTGGCTACTGCGTTATGCAGGCCACCAACTCCGGCAACGACCAGCTCGAAGCCCGCCTCCGCCAGAATGCCAGACCTGATTCTCTCATGATGGCGAAAGCAAATC
GAGAGAGGCTAGCAGAATACCTTGGTGAGTTGCAGAGGAAAGAGGACACGAACGATCGATATGTTGCTGCTTTGAGGGGAGAGACATTGACAAGGAAGCCATATGAGAGA
ATTCAACCAATCCCTAATCAAAGCAACGATGCCTCGGTCTCTGGCAAGGAACAACAGGTCAAGAAGGAAAACAAATAA

mRNA sequence

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ATATAATAGAAAAGGAAAAATTGATGTAATCCAGGTGGCATTGATTTTAGCAGAGTTGAGAGTTAGAGCATCAAGAAACGAGGGCAAAGAATGTCGTTCCTGTGGGAGAA
GAGCGAGTCATGGAGATGGATCGTGAGGAAAACCAGAGACTCCAAGCCTTTCTTCTTCGCCTTCGCCACCGTCTGCGGCGTCGTTCCCGGCGTCATTGGCTACTGCGTTA
TGCAGGCCACCAACTCCGGCAACGACCAGCTCGAAGCCCGCCTCCGCCAGAATGCCAGACCTGATTCTCTCATGATGGCGAAAGCAAATCGAGAGAGGCTAGCAGAATAC
CTTGGTGAGTTGCAGAGGAAAGAGGACACGAACGATCGATATGTTGCTGCTTTGAGGGGAGAGACATTGACAAGGAAGCCATATGAGAGAATTCAACCAATCCCTAATCA
AAGCAACGATGCCTCGGTCTCTGGCAAGGAACAACAGGTCAAGAAGGAAAACAAATAAGTGGGTATATTGTTACAGGGGCAGGTTCTTAAGCTTAAACTTTGTACGACAT
GGTATGATTTCATATGACAGTTAACTTTTCCGGAAGCCTTGTTTATTCCAAATGTTTTATGATGTGTTACCATGGGGATTTTCCTACTCATTGATAAGGTCTGTTTAGCT
AATGGAAATTTTATGTCAATTTTGGATTTGTTCTTTACAATCATTAGCCTTGTCAGTGTTTTAAAATGCTCTCGGGACGCACGACTAGCTTCGAGGCTCGCGTAAAAATG
TGTGAAGCCTTAAGAAAGTGTTTGGATGTAGAATTGTGGAGTGATTATTTTGAGTGATCATAAATGGGGGGTTATTTTGAATTATTGGAAATTTGAGTTTTAATAATAGC
TCGTTTGAATGTGATTATTTGTAGAGGGGTTGCAGTTAATAACTGGATAATGGTTTTGTAGAGGGGTTGCAAGCAATAGCTTGTTAGGATGTGGTTATAAATAAATGTTT
ATTTTGAGTGGTTAGAAATGCATATTTATTTTAAGGGGTTAGAAATGAA

Protein sequence

Show/hide protein sequence

MSFLWEKSESWRWIVRKTRDSKPFFFAFATVCGVVPGVIGYCVMQATNSGNDQLEARLRQNARPDSLMMAKANRERLAEYLGELQRKEDTNDRYVAALRGETLTRKPYER
IQPIPNQSNDASVSGKEQQVKKENK

Sed0024280 (gene) of Chayote v1 genome