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Sed0024309 (gene) of Chayote v1 genome

Gene IDSed0024309
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG01:66911342..66914166
RNA-Seq ExpressionSed0024309
SyntenySed0024309
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605612.1 Granule-bound starch synthase 1, chloroplastic/amyloplastic, partial [Cucurbita argyrosperma subsp. sororia]3.3e-0964.56Show/hide
Query:  MKASYTFLASVAVTAATAMAFSSASSSSSNGDRNLALSPPSRQGFV----------SDSSSEKGKFAPRFDGLRFIETL
        MK + T LAS  V AA+ MAFSS SSSSS+GDR+LAL PPS +G V          SDSSSEK KFAPRFDGL+FIETL
Subjt:  MKASYTFLASVAVTAATAMAFSSASSSSSNGDRNLALSPPSRQGFV----------SDSSSEKGKFAPRFDGLRFIETL
KAG7035524.1 hypothetical protein SDJN02_02320 [Cucurbita argyrosperma subsp. argyrosperma]2.3e-1065.43Show/hide
Query:  MKASYTFLASVAVTAATAMAFSSASSSSSNGDRNLALSPPSRQGFV----------SDSSSEKGKFAPRFDGLRFIETLVT
        MK + T LAS  V AA+ MAFSS SSSSS+GDR+LAL PPS +G V          SDSSSEK KFAPRFDGL+FIETLVT
Subjt:  MKASYTFLASVAVTAATAMAFSSASSSSSNGDRNLALSPPSRQGFV----------SDSSSEKGKFAPRFDGLRFIETLVT
XP_008437456.1 PREDICTED: uncharacterized protein LOC103482871 [Cucumis melo]4.6e-1166.67Show/hide
Query:  MKASYTFLASVAVTAATAMAFSSASSSSSNGDRNLALSPPSRQGFV----------SDSSSEKGKFAPRFDGLRFIETLVT
        MK S T LAS  V AA+ MAFS  SSSSS GDR+L L PPS QGFV          +DSSSEK KFAPRFDGLRFIETLVT
Subjt:  MKASYTFLASVAVTAATAMAFSSASSSSSNGDRNLALSPPSRQGFV----------SDSSSEKGKFAPRFDGLRFIETLVT
XP_022929045.1 uncharacterized protein LOC111435756 [Cucurbita moschata]1.9e-1269.14Show/hide
Query:  MKASYTFLASVAVTAATAMAFSSASSSSSNGDRNLALSPPSRQGFV----------SDSSSEKGKFAPRFDGLRFIETLVT
        MK S T LAS  V AA+ MAFSS SSSSSN DR+LAL+PPSR+GFV          SDSS+EK KFAPRFDGLRFIETLVT
Subjt:  MKASYTFLASVAVTAATAMAFSSASSSSSNGDRNLALSPPSRQGFV----------SDSSSEKGKFAPRFDGLRFIETLVT
XP_023520500.1 uncharacterized protein LOC111783920 [Cucurbita pepo subsp. pepo]4.1e-1267.9Show/hide
Query:  MKASYTFLASVAVTAATAMAFSSASSSSSNGDRNLALSPPSRQGFV----------SDSSSEKGKFAPRFDGLRFIETLVT
        MK S T LAS  V AA+ MAFSS SSSSSN DR+LAL+PPSR+GFV          SD+S+EK KFAPRFDGLRFIETLVT
Subjt:  MKASYTFLASVAVTAATAMAFSSASSSSSNGDRNLALSPPSRQGFV----------SDSSSEKGKFAPRFDGLRFIETLVT
TrEMBL top hitse value%identityAlignment
A0A0A0KQK5 Uncharacterized protein4.2e-1065.06Show/hide
Query:  MKASYTFLASVAVTAATAMAFSSASSSSSN--GDRNLALSPPSRQGFVS----------DSSSEKGKFAPRFDGLRFIETLVT
        MK S T LAS  V AA+ MAFSS+SSSSS+  GDR+L L   S QGFVS          DSSSEK KFAPRFDGLRFIETLVT
Subjt:  MKASYTFLASVAVTAATAMAFSSASSSSSN--GDRNLALSPPSRQGFVS----------DSSSEKGKFAPRFDGLRFIETLVT
A0A1S3AU25 uncharacterized protein LOC1034828712.2e-1166.67Show/hide
Query:  MKASYTFLASVAVTAATAMAFSSASSSSSNGDRNLALSPPSRQGFV----------SDSSSEKGKFAPRFDGLRFIETLVT
        MK S T LAS  V AA+ MAFS  SSSSS GDR+L L PPS QGFV          +DSSSEK KFAPRFDGLRFIETLVT
Subjt:  MKASYTFLASVAVTAATAMAFSSASSSSSNGDRNLALSPPSRQGFV----------SDSSSEKGKFAPRFDGLRFIETLVT
A0A5A7TMP9 Uncharacterized protein2.7e-0960.44Show/hide
Query:  MKASYTFLASVAVTAATAMAFSSASSSSSNGDRNLALSPPSRQ----------GFVS----------DSSSEKGKFAPRFDGLRFIETLVT
        MK S T LAS  V AA+ MAFS  SSSSS GDR+L L PPS Q          GFVS          DSSSEK KFAPRFDGLRFIETLVT
Subjt:  MKASYTFLASVAVTAATAMAFSSASSSSSNGDRNLALSPPSRQ----------GFVS----------DSSSEKGKFAPRFDGLRFIETLVT
A0A6J1ET49 uncharacterized protein LOC1114357569.0e-1369.14Show/hide
Query:  MKASYTFLASVAVTAATAMAFSSASSSSSNGDRNLALSPPSRQGFV----------SDSSSEKGKFAPRFDGLRFIETLVT
        MK S T LAS  V AA+ MAFSS SSSSSN DR+LAL+PPSR+GFV          SDSS+EK KFAPRFDGLRFIETLVT
Subjt:  MKASYTFLASVAVTAATAMAFSSASSSSSNGDRNLALSPPSRQGFV----------SDSSSEKGKFAPRFDGLRFIETLVT
A0A6J1HZR1 uncharacterized protein LOC1114691109.0e-1369.14Show/hide
Query:  MKASYTFLASVAVTAATAMAFSSASSSSSNGDRNLALSPPSRQGFV----------SDSSSEKGKFAPRFDGLRFIETLVT
        MK S T LAS  V AA+ MAFSS SSSSSN DR+LAL+PPSR+GFV          SDSS+EK KFAPRFDGLRFIETLVT
Subjt:  MKASYTFLASVAVTAATAMAFSSASSSSSNGDRNLALSPPSRQGFV----------SDSSSEKGKFAPRFDGLRFIETLVT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G28290.1 unknown protein4.4e-0446.15Show/hide
Query:  MKASYTFLASVAVTAATAMAFSSASS----SSSNGDRNLALSPPSRQGFVSDSSSEKG---KFAPRFDGLRFIETLVT
        MK +    AS++V AA+A A S+ S+    S S+ + NL+      +      SSE G   KFAPRFDGLRFIETLVT
Subjt:  MKASYTFLASVAVTAATAMAFSSASS----SSSNGDRNLALSPPSRQGFVSDSSSEKG---KFAPRFDGLRFIETLVT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCCTCCTACACGTTTCTCGCCTCCGTCGCCGTCACCGCCGCCACCGCAATGGCTTTCTCCTCCGCCTCTTCATCCTCCTCCAATGGAGATCGCAACCTCGCGCT
TTCCCCTCCCTCGCGACAGGGCTTCGTTTCGGATTCTTCTTCGGAGAAGGGGAAATTCGCGCCGAGGTTTGATGGATTGAGATTTATTGAGACTCTGGTCACTCCGAGTT
TTCGCGATAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCCTCCTACACGTTTCTCGCCTCCGTCGCCGTCACCGCCGCCACCGCAATGGCTTTCTCCTCCGCCTCTTCATCCTCCTCCAATGGAGATCGCAACCTCGCGCT
TTCCCCTCCCTCGCGACAGGGCTTCGTTTCGGATTCTTCTTCGGAGAAGGGGAAATTCGCGCCGAGGTTTGATGGATTGAGATTTATTGAGACTCTGGTCACTCCGAGTT
TTCGCGATAAATAAAAATTTATCGTTGATTCTGTTTTCGGTATCAACAACGTGCATGAAGGTTCTTGCACACCAAAAGCAACCAAGTACATTTTTTTAAGAGTAAAACTC
CCATACACATGCATGTGTTGCATGTGTAGGAGAGCCCTCTGTTAAGATATAGATTTCCTCCCATTTAAATGTT
Protein sequenceShow/hide protein sequence
MKASYTFLASVAVTAATAMAFSSASSSSSNGDRNLALSPPSRQGFVSDSSSEKGKFAPRFDGLRFIETLVTPSFRDK