; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0024347 (gene) of Chayote v1 genome

Gene IDSed0024347
OrganismSechium edule (Chayote v1)
Descriptionmediator of RNA polymerase II transcription subunit 15a
Genome locationLG10:35183471..35187037
RNA-Seq ExpressionSed0024347
SyntenySed0024347
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003713 - transcription coactivator activity (molecular function)
GO:0031490 - chromatin DNA binding (molecular function)
InterPro domainsIPR036529 - Coactivator CBP, KIX domain superfamily
IPR036546 - Mediator complex subunit 15, KIX domain
IPR044661 - Mediator of RNA polymerase II transcription subunit 15a/b/c-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571702.1 Mediator of RNA polymerase II transcription subunit 15a, partial [Cucurbita argyrosperma subsp. sororia]7.9e-11267.48Show/hide
Query:  EPGVESSKDWRSELPPDSRQRHVDSIMETLKRYLPVSGDEALSMLKKIAGWFEEKIYTAATNQSDYLRKIYLKLLAMETKFQDHPMGDSLLSNSVVPSTE
        EPG+E+  DWRS+L PDSRQR V+ IMETLKR+LPVSG E LS LKKIA  FEEKIYTAAT+QSDYLRKI LK+L METK Q  PMG SL SN +VPS +
Subjt:  EPGVESSKDWRSELPPDSRQRHVDSIMETLKRYLPVSGDEALSMLKKIAGWFEEKIYTAATNQSDYLRKIYLKLLAMETKFQDHPMGDSLLSNSVVPSTE

Query:  PLDSTSQSMQPQALNQGHSMPVPMSSNLPQSHQQLLS--------AQISSSLPSAVSPIAGLASASMPNIVGPNRTMRNVSGVPQSSVGNSMGLGVRSNV
        PLDS SQSMQPQ LNQG S+ VP SSN PQS QQLLS        +Q SSSLPSAV P++GLAS+SMPN+VG N +M+NVSG+PQ+SVGN+MG GV SNV
Subjt:  PLDSTSQSMQPQALNQGHSMPVPMSSNLPQSHQQLLS--------AQISSSLPSAVSPIAGLASASMPNIVGPNRTMRNVSGVPQSSVGNSMGLGVRSNV

Query:  FSNSQRPIQGRRVVSQQQSQNLQQQ----LLLQQQLQLQLQQPIFQQGS---------IPQQQQNLMPPNQLQSSQQPVLQTSSVMLQQNQQSPIQQPTQ
        F+NSQRP+QGR+VVSQQQ Q  Q Q    L  QQQLQ Q+     QQGS         IPQQQQNLM PNQLQSSQQ  +Q S   LQQNQQS IQQPTQ
Subjt:  FSNSQRPIQGRRVVSQQQSQNLQQQ----LLLQQQLQLQLQQPIFQQGS---------IPQQQQNLMPPNQLQSSQQPVLQTSSVMLQQNQQSPIQQPTQ

Query:  SMIQQPPQPVLRQHQQSQQHPFLHRQPTMPQQINLPSQQQQQLIS-QPKFSNM-------QQNSIGEMQQ-LIRQSRSYGQQSNLLNLQ----QQQQLMA
        SM+QQP QPVLRQ  QSQQH  +H Q TM QQ +LPSQQQQQLIS QP  SNM       QQNS+G+MQQ L +QSRS+GQQSNL N+Q    QQQQLMA
Subjt:  SMIQQPPQPVLRQHQQSQQHPFLHRQPTMPQQINLPSQQQQQLIS-QPKFSNM-------QQNSIGEMQQ-LIRQSRSYGQQSNLLNLQ----QQQQLMA

Query:  QLSNLSNLQQQQ
        Q +NLSNLQQQQ
Subjt:  QLSNLSNLQQQQ

KAG7011427.1 Mediator of RNA polymerase II transcription subunit 15a [Cucurbita argyrosperma subsp. argyrosperma]2.3e-11166.91Show/hide
Query:  EPGVESSKDWRSELPPDSRQRHVDSIMETLKRYLPVSGDEALSMLKKIAGWFEEKIYTAATNQSDYLRKIYLKLLAMETKFQDHPMGDSLLSNSVVPSTE
        EPG+E+  DWRS+L PDSRQR V+ IMETLKR+LPVSG E LS LKKIA  FEEKIYTAAT+QSDYLRKI LK+L METK Q  PMG SL SN +VPS +
Subjt:  EPGVESSKDWRSELPPDSRQRHVDSIMETLKRYLPVSGDEALSMLKKIAGWFEEKIYTAATNQSDYLRKIYLKLLAMETKFQDHPMGDSLLSNSVVPSTE

Query:  PLDSTSQSMQPQALNQGHSMPVPMSSNLPQSHQQLLS--------AQISSSLPSAVSPIAGLASASMPNIVGPNRTMRNVSGVPQSSVGNSMGLGVRSNV
        PLDS SQSMQPQ LNQG S+ VP SSN PQS QQLLS        +Q SSSLPSAV P++GLAS+SMPN+VG N +M+NVSG+PQ+SVGN+MG GV SNV
Subjt:  PLDSTSQSMQPQALNQGHSMPVPMSSNLPQSHQQLLS--------AQISSSLPSAVSPIAGLASASMPNIVGPNRTMRNVSGVPQSSVGNSMGLGVRSNV

Query:  FSNSQRPIQGRRVVSQQQSQNLQQQ----LLLQQQLQLQLQQPIFQQGS---------IPQQQQNLMPPNQLQSSQQPVLQTSSVM-----LQQNQQSPI
        F+NSQRP+QGR+VVSQQQ Q  Q Q    L  QQQLQ Q+    FQQGS         IPQQQQNLM PNQLQSSQQ  +Q S +      LQQNQQS I
Subjt:  FSNSQRPIQGRRVVSQQQSQNLQQQ----LLLQQQLQLQLQQPIFQQGS---------IPQQQQNLMPPNQLQSSQQPVLQTSSVM-----LQQNQQSPI

Query:  QQPTQSMIQQPPQPVLRQHQQSQQHPFLHRQPTMPQQINLPSQQQQQLIS-QPKFSNM-------QQNSIGEMQQ-LIRQSRSYGQQSNLLNLQ----QQ
        QQPTQSM+QQP QPVLRQ  QSQQH  +H Q TM QQ +LPSQQQQQLIS QP  SNM       QQNS+G+MQQ L +QSRS+GQQSNL N+Q    QQ
Subjt:  QQPTQSMIQQPPQPVLRQHQQSQQHPFLHRQPTMPQQINLPSQQQQQLIS-QPKFSNM-------QQNSIGEMQQ-LIRQSRSYGQQSNLLNLQ----QQ

Query:  QQLMAQLSNLSNLQQQQ
        QQLMAQ +NLSNLQQQQ
Subjt:  QQLMAQLSNLSNLQQQQ

XP_022963528.1 mediator of RNA polymerase II transcription subunit 15a-like isoform X1 [Cucurbita moschata]8.8e-11166.67Show/hide
Query:  EPGVESSKDWRSELPPDSRQRHVDSIMETLKRYLPVSGDEALSMLKKIAGWFEEKIYTAATNQSDYLRKIYLKLLAMETKFQDHPMGDSLLSNSVVPSTE
        EPG+E+  DWRS+L PDSRQR V+ IMETLKR+LPVSG E LS LKKIA  FEEKIYTAAT+QSDYLRKI LK+L METK Q  PMG SL SN +VPS +
Subjt:  EPGVESSKDWRSELPPDSRQRHVDSIMETLKRYLPVSGDEALSMLKKIAGWFEEKIYTAATNQSDYLRKIYLKLLAMETKFQDHPMGDSLLSNSVVPSTE

Query:  PLDSTSQSMQPQALNQGHSMPVPMSSNLPQSHQQLLS--------AQISSSLPSAVSPIAGLASASMPNIVGPNRTMRNVSGVPQSSVGNSMGLGVRSNV
        PLDS SQSMQPQ LNQG S+ VP SSN PQS QQLLS        +Q SSSLPSAV P++GLAS+SMPN+VG N +M+NVSG+PQ+SVGN+MG GV SNV
Subjt:  PLDSTSQSMQPQALNQGHSMPVPMSSNLPQSHQQLLS--------AQISSSLPSAVSPIAGLASASMPNIVGPNRTMRNVSGVPQSSVGNSMGLGVRSNV

Query:  FSNSQRPIQGRRVVSQQQSQNLQQQ----LLLQQQLQLQLQQPIFQQGS---------IPQQQQNLMPPNQLQSSQQPVLQTSSVM-----LQQNQQSPI
        F+NSQRP+QGR+VVSQQQ Q  Q Q    L  QQQLQ Q+     QQGS         IPQQQQNLM PNQLQSSQQ  +Q S +      LQQNQQS I
Subjt:  FSNSQRPIQGRRVVSQQQSQNLQQQ----LLLQQQLQLQLQQPIFQQGS---------IPQQQQNLMPPNQLQSSQQPVLQTSSVM-----LQQNQQSPI

Query:  QQPTQSMIQQPPQPVLRQHQQSQQHPFLHRQPTMPQQINLPSQQQQQLIS-QPKFSNM-------QQNSIGEMQQ-LIRQSRSYGQQSNLLNLQ----QQ
        QQPTQSM+QQP QPVLRQ  QSQQH  +H Q TM QQ +LPSQQQQQLIS QP  SNM       QQNS+G+MQQ L +QSRS+GQQSNL N+Q    QQ
Subjt:  QQPTQSMIQQPPQPVLRQHQQSQQHPFLHRQPTMPQQINLPSQQQQQLIS-QPKFSNM-------QQNSIGEMQQ-LIRQSRSYGQQSNLLNLQ----QQ

Query:  QQLMAQLSNLSNLQQQQ
        QQLMAQ +NLSNLQQQQ
Subjt:  QQLMAQLSNLSNLQQQQ

XP_022967562.1 mediator of RNA polymerase II transcription subunit 15a-like isoform X1 [Cucurbita maxima]1.8e-11166.99Show/hide
Query:  EPGVESSKDWRSELPPDSRQRHVDSIMETLKRYLPVSGDEALSMLKKIAGWFEEKIYTAATNQSDYLRKIYLKLLAMETKFQDHPMGDSLLSNSVVPSTE
        EPG+E   DWRS+L PDSRQR V+ IMETLKR+LPVSG E LS LKKIA  FEEKIYTAAT+QSDYLRKI LK+L METK Q  PMG SL SN +VPS +
Subjt:  EPGVESSKDWRSELPPDSRQRHVDSIMETLKRYLPVSGDEALSMLKKIAGWFEEKIYTAATNQSDYLRKIYLKLLAMETKFQDHPMGDSLLSNSVVPSTE

Query:  PLDSTSQSMQPQALNQGHSMPVPMSSNLPQSHQQLLS--------AQISSSLPSAVSPIAGLASASMPNIVGPNRTMRNVSGVPQSSVGNSMGLGVRSNV
        PLDS SQSMQPQ LNQG S+ VP  SN PQS QQLLS        +Q SSSLPSAV P++GLAS+SMPN+VG N +M+NVSG+PQ+SVGNSMG GV SNV
Subjt:  PLDSTSQSMQPQALNQGHSMPVPMSSNLPQSHQQLLS--------AQISSSLPSAVSPIAGLASASMPNIVGPNRTMRNVSGVPQSSVGNSMGLGVRSNV

Query:  FSNSQRPIQGRRVVSQQQSQNLQQQ----LLLQQQLQLQLQQPIFQQGS---------IPQQQQNLMPPNQLQSSQQPVLQTSSVM-----LQQNQQSPI
        F+NSQRP+QGR+VVSQQQ Q  Q Q    L  QQQLQ Q+    FQQGS         IPQQQQNLM PNQLQSSQQP +Q S +      LQQNQQS I
Subjt:  FSNSQRPIQGRRVVSQQQSQNLQQQ----LLLQQQLQLQLQQPIFQQGS---------IPQQQQNLMPPNQLQSSQQPVLQTSSVM-----LQQNQQSPI

Query:  QQPTQSMIQQPPQPVLRQHQQSQQHPFLHRQPTMPQQINLPSQQQQQLIS-QPKFSNM-------QQNSIGEMQQ-LIRQSRSYGQQSNLLN-----LQQ
        QQPTQSM+QQP QPVLRQ  QSQQH  +H Q TM QQ +LPSQQQQQLIS QP  S+M       QQNS+G+MQQ L +QSRS+GQQSNL N     LQQ
Subjt:  QQPTQSMIQQPPQPVLRQHQQSQQHPFLHRQPTMPQQINLPSQQQQQLIS-QPKFSNM-------QQNSIGEMQQ-LIRQSRSYGQQSNLLN-----LQQ

Query:  QQQLMAQLSNLSNLQQQQ
        QQQLMAQ +NLSNLQQQQ
Subjt:  QQQLMAQLSNLSNLQQQQ

XP_023553730.1 mediator of RNA polymerase II transcription subunit 15a-like [Cucurbita pepo subsp. pepo]5.1e-11166.51Show/hide
Query:  EPGVESSKDWRSELPPDSRQRHVDSIMETLKRYLPVSGDEALSMLKKIAGWFEEKIYTAATNQSDYLRKIYLKLLAMETKFQDHPMGDSLLSNSVVPSTE
        EPG+E+  DWRS+L PDSRQR V+ IMETLKR+LPVSG E LS LKKIA  FEEKIYTAAT+QSDYLRKI LK+L METK Q  PMG SL SN +VPS +
Subjt:  EPGVESSKDWRSELPPDSRQRHVDSIMETLKRYLPVSGDEALSMLKKIAGWFEEKIYTAATNQSDYLRKIYLKLLAMETKFQDHPMGDSLLSNSVVPSTE

Query:  PLDSTSQSMQPQALNQGHSMPVPMSSNLPQSHQQLLS--------AQISSSLPSAVSPIAGLASASMPNIVGPNRTMRNVSGVPQSSVGNSMGLGVRSNV
        PLDS SQSMQPQ LNQG S+ VP SSN PQS QQLLS        +Q SSSLPSAV P++GLAS+SMPN+VG N +M+NVSG+PQ+SVGN+MG GV SNV
Subjt:  PLDSTSQSMQPQALNQGHSMPVPMSSNLPQSHQQLLS--------AQISSSLPSAVSPIAGLASASMPNIVGPNRTMRNVSGVPQSSVGNSMGLGVRSNV

Query:  FSNSQRPIQGRRVVSQQQSQNLQQQ----LLLQQQLQLQLQQPIFQQGS---------IPQQQQNLMPPNQLQSSQQPVLQTSSVM-----LQQNQQSPI
        F+NSQRP+QGR+VV+QQQ Q  Q Q    L  QQQLQ Q+    FQQGS         IPQQQQNLM PNQLQSSQQ  +Q S +      LQQNQQS I
Subjt:  FSNSQRPIQGRRVVSQQQSQNLQQQ----LLLQQQLQLQLQQPIFQQGS---------IPQQQQNLMPPNQLQSSQQPVLQTSSVM-----LQQNQQSPI

Query:  QQPTQSMIQQPPQPVLRQHQQSQQHPFLHRQPTMPQQINLPSQQQQQLIS-QPKFSNM-------QQNSIGEMQQ-LIRQSRSYGQQSNLLNLQ----QQ
        QQPTQSM+QQP QPVLRQ  QSQQH  +H Q TM QQ +LPSQQQQQLIS QP  SNM       QQNS+G+MQQ L +QSRS+GQQSNL N+Q    QQ
Subjt:  QQPTQSMIQQPPQPVLRQHQQSQQHPFLHRQPTMPQQINLPSQQQQQLIS-QPKFSNM-------QQNSIGEMQQ-LIRQSRSYGQQSNLLNLQ----QQ

Query:  QQLMAQLSNLSNLQQQQR
        QQLMAQ +NLSNLQQQQ+
Subjt:  QQLMAQLSNLSNLQQQQR

TrEMBL top hitse value%identityAlignment
A0A6J1HI15 mediator of RNA polymerase II transcription subunit 15a-like isoform X14.2e-11166.67Show/hide
Query:  EPGVESSKDWRSELPPDSRQRHVDSIMETLKRYLPVSGDEALSMLKKIAGWFEEKIYTAATNQSDYLRKIYLKLLAMETKFQDHPMGDSLLSNSVVPSTE
        EPG+E+  DWRS+L PDSRQR V+ IMETLKR+LPVSG E LS LKKIA  FEEKIYTAAT+QSDYLRKI LK+L METK Q  PMG SL SN +VPS +
Subjt:  EPGVESSKDWRSELPPDSRQRHVDSIMETLKRYLPVSGDEALSMLKKIAGWFEEKIYTAATNQSDYLRKIYLKLLAMETKFQDHPMGDSLLSNSVVPSTE

Query:  PLDSTSQSMQPQALNQGHSMPVPMSSNLPQSHQQLLS--------AQISSSLPSAVSPIAGLASASMPNIVGPNRTMRNVSGVPQSSVGNSMGLGVRSNV
        PLDS SQSMQPQ LNQG S+ VP SSN PQS QQLLS        +Q SSSLPSAV P++GLAS+SMPN+VG N +M+NVSG+PQ+SVGN+MG GV SNV
Subjt:  PLDSTSQSMQPQALNQGHSMPVPMSSNLPQSHQQLLS--------AQISSSLPSAVSPIAGLASASMPNIVGPNRTMRNVSGVPQSSVGNSMGLGVRSNV

Query:  FSNSQRPIQGRRVVSQQQSQNLQQQ----LLLQQQLQLQLQQPIFQQGS---------IPQQQQNLMPPNQLQSSQQPVLQTSSVM-----LQQNQQSPI
        F+NSQRP+QGR+VVSQQQ Q  Q Q    L  QQQLQ Q+     QQGS         IPQQQQNLM PNQLQSSQQ  +Q S +      LQQNQQS I
Subjt:  FSNSQRPIQGRRVVSQQQSQNLQQQ----LLLQQQLQLQLQQPIFQQGS---------IPQQQQNLMPPNQLQSSQQPVLQTSSVM-----LQQNQQSPI

Query:  QQPTQSMIQQPPQPVLRQHQQSQQHPFLHRQPTMPQQINLPSQQQQQLIS-QPKFSNM-------QQNSIGEMQQ-LIRQSRSYGQQSNLLNLQ----QQ
        QQPTQSM+QQP QPVLRQ  QSQQH  +H Q TM QQ +LPSQQQQQLIS QP  SNM       QQNS+G+MQQ L +QSRS+GQQSNL N+Q    QQ
Subjt:  QQPTQSMIQQPPQPVLRQHQQSQQHPFLHRQPTMPQQINLPSQQQQQLIS-QPKFSNM-------QQNSIGEMQQ-LIRQSRSYGQQSNLLNLQ----QQ

Query:  QQLMAQLSNLSNLQQQQ
        QQLMAQ +NLSNLQQQQ
Subjt:  QQLMAQLSNLSNLQQQQ

A0A6J1HR60 mediator of RNA polymerase II transcription subunit 15a-like isoform X18.6e-11266.99Show/hide
Query:  EPGVESSKDWRSELPPDSRQRHVDSIMETLKRYLPVSGDEALSMLKKIAGWFEEKIYTAATNQSDYLRKIYLKLLAMETKFQDHPMGDSLLSNSVVPSTE
        EPG+E   DWRS+L PDSRQR V+ IMETLKR+LPVSG E LS LKKIA  FEEKIYTAAT+QSDYLRKI LK+L METK Q  PMG SL SN +VPS +
Subjt:  EPGVESSKDWRSELPPDSRQRHVDSIMETLKRYLPVSGDEALSMLKKIAGWFEEKIYTAATNQSDYLRKIYLKLLAMETKFQDHPMGDSLLSNSVVPSTE

Query:  PLDSTSQSMQPQALNQGHSMPVPMSSNLPQSHQQLLS--------AQISSSLPSAVSPIAGLASASMPNIVGPNRTMRNVSGVPQSSVGNSMGLGVRSNV
        PLDS SQSMQPQ LNQG S+ VP  SN PQS QQLLS        +Q SSSLPSAV P++GLAS+SMPN+VG N +M+NVSG+PQ+SVGNSMG GV SNV
Subjt:  PLDSTSQSMQPQALNQGHSMPVPMSSNLPQSHQQLLS--------AQISSSLPSAVSPIAGLASASMPNIVGPNRTMRNVSGVPQSSVGNSMGLGVRSNV

Query:  FSNSQRPIQGRRVVSQQQSQNLQQQ----LLLQQQLQLQLQQPIFQQGS---------IPQQQQNLMPPNQLQSSQQPVLQTSSVM-----LQQNQQSPI
        F+NSQRP+QGR+VVSQQQ Q  Q Q    L  QQQLQ Q+    FQQGS         IPQQQQNLM PNQLQSSQQP +Q S +      LQQNQQS I
Subjt:  FSNSQRPIQGRRVVSQQQSQNLQQQ----LLLQQQLQLQLQQPIFQQGS---------IPQQQQNLMPPNQLQSSQQPVLQTSSVM-----LQQNQQSPI

Query:  QQPTQSMIQQPPQPVLRQHQQSQQHPFLHRQPTMPQQINLPSQQQQQLIS-QPKFSNM-------QQNSIGEMQQ-LIRQSRSYGQQSNLLN-----LQQ
        QQPTQSM+QQP QPVLRQ  QSQQH  +H Q TM QQ +LPSQQQQQLIS QP  S+M       QQNS+G+MQQ L +QSRS+GQQSNL N     LQQ
Subjt:  QQPTQSMIQQPPQPVLRQHQQSQQHPFLHRQPTMPQQINLPSQQQQQLIS-QPKFSNM-------QQNSIGEMQQ-LIRQSRSYGQQSNLLN-----LQQ

Query:  QQQLMAQLSNLSNLQQQQ
        QQQLMAQ +NLSNLQQQQ
Subjt:  QQQLMAQLSNLSNLQQQQ

A0A6J1JK72 mediator of RNA polymerase II transcription subunit 15a-like isoform X39.2e-10665.63Show/hide
Query:  EPGVESSKDWRSELPPDSRQRHVDSIMETLKRYLPVSGDEALSMLKKIAGWFEEKIYTAATNQSDYLRKIYLKLLAMETKFQDHPMGDSLLSNSVVPSTE
        E GV++  DWRS+L PDSR R V+ IMETLKR+LPVSG E LS L+KIA  FEEKIY AAT+QSDYLRKI LK+L METK Q      +L SNS+VP+ +
Subjt:  EPGVESSKDWRSELPPDSRQRHVDSIMETLKRYLPVSGDEALSMLKKIAGWFEEKIYTAATNQSDYLRKIYLKLLAMETKFQDHPMGDSLLSNSVVPSTE

Query:  PLDSTSQSMQPQALNQGHSMPVPMSSNLPQSHQQLLS--------AQISSSLPSAVSPIAGLASASMPNIVGPNRTMRNVSGVPQSSVGNSMGLGVRSNV
        PLDSTSQSMQ Q LNQG SM  PMSSN PQ  QQLLS        +Q SSSLPS+V P+AGLASA M NIVG N +M+NVSGVPQSSVGN+MG GV +NV
Subjt:  PLDSTSQSMQPQALNQGHSMPVPMSSNLPQSHQQLLS--------AQISSSLPSAVSPIAGLASASMPNIVGPNRTMRNVSGVPQSSVGNSMGLGVRSNV

Query:  FSNSQRPIQGRRVVS-----QQQSQNLQQQLLLQQQ-LQLQLQQPIFQQGS---------IPQQQQNLMPPNQLQSSQQPVLQTSSVMLQQNQQSPIQQP
        F+NSQRPIQGR+VVS     QQQSQ+ QQQL  QQQ LQ Q+ +  FQQGS         IPQQQ NLMPPNQLQSSQQ V+Q S   LQQNQQS IQQP
Subjt:  FSNSQRPIQGRRVVS-----QQQSQNLQQQLLLQQQ-LQLQLQQPIFQQGS---------IPQQQQNLMPPNQLQSSQQPVLQTSSVMLQQNQQSPIQQP

Query:  TQSMIQQPPQPVLRQHQQSQQHPFLHRQPTMPQQINLPSQQQQQLIS-QPKFSNMQ-----QNSIGEM-QQLIRQSRSYGQQSNLLNL-----------Q
        TQSM+QQPPQPVLRQ QQSQQH  LH+QPTM QQ +L SQQQQQLI+ Q   SNMQ     QNS+G+M QQL +QSRS+GQQSNL N+           Q
Subjt:  TQSMIQQPPQPVLRQHQQSQQHPFLHRQPTMPQQINLPSQQQQQLIS-QPKFSNMQ-----QNSIGEM-QQLIRQSRSYGQQSNLLNL-----------Q

Query:  QQQQLMAQLSNLSNLQQQQ
        QQQQLM Q S+LSNLQQ Q
Subjt:  QQQQLMAQLSNLSNLQQQQ

A0A6J1JM75 mediator of RNA polymerase II transcription subunit 15a-like isoform X29.2e-10665.63Show/hide
Query:  EPGVESSKDWRSELPPDSRQRHVDSIMETLKRYLPVSGDEALSMLKKIAGWFEEKIYTAATNQSDYLRKIYLKLLAMETKFQDHPMGDSLLSNSVVPSTE
        E GV++  DWRS+L PDSR R V+ IMETLKR+LPVSG E LS L+KIA  FEEKIY AAT+QSDYLRKI LK+L METK Q      +L SNS+VP+ +
Subjt:  EPGVESSKDWRSELPPDSRQRHVDSIMETLKRYLPVSGDEALSMLKKIAGWFEEKIYTAATNQSDYLRKIYLKLLAMETKFQDHPMGDSLLSNSVVPSTE

Query:  PLDSTSQSMQPQALNQGHSMPVPMSSNLPQSHQQLLS--------AQISSSLPSAVSPIAGLASASMPNIVGPNRTMRNVSGVPQSSVGNSMGLGVRSNV
        PLDSTSQSMQ Q LNQG SM  PMSSN PQ  QQLLS        +Q SSSLPS+V P+AGLASA M NIVG N +M+NVSGVPQSSVGN+MG GV +NV
Subjt:  PLDSTSQSMQPQALNQGHSMPVPMSSNLPQSHQQLLS--------AQISSSLPSAVSPIAGLASASMPNIVGPNRTMRNVSGVPQSSVGNSMGLGVRSNV

Query:  FSNSQRPIQGRRVVS-----QQQSQNLQQQLLLQQQ-LQLQLQQPIFQQGS---------IPQQQQNLMPPNQLQSSQQPVLQTSSVMLQQNQQSPIQQP
        F+NSQRPIQGR+VVS     QQQSQ+ QQQL  QQQ LQ Q+ +  FQQGS         IPQQQ NLMPPNQLQSSQQ V+Q S   LQQNQQS IQQP
Subjt:  FSNSQRPIQGRRVVS-----QQQSQNLQQQLLLQQQ-LQLQLQQPIFQQGS---------IPQQQQNLMPPNQLQSSQQPVLQTSSVMLQQNQQSPIQQP

Query:  TQSMIQQPPQPVLRQHQQSQQHPFLHRQPTMPQQINLPSQQQQQLIS-QPKFSNMQ-----QNSIGEM-QQLIRQSRSYGQQSNLLNL-----------Q
        TQSM+QQPPQPVLRQ QQSQQH  LH+QPTM QQ +L SQQQQQLI+ Q   SNMQ     QNS+G+M QQL +QSRS+GQQSNL N+           Q
Subjt:  TQSMIQQPPQPVLRQHQQSQQHPFLHRQPTMPQQINLPSQQQQQLIS-QPKFSNMQ-----QNSIGEM-QQLIRQSRSYGQQSNLLNL-----------Q

Query:  QQQQLMAQLSNLSNLQQQQ
        QQQQLM Q S+LSNLQQ Q
Subjt:  QQQQLMAQLSNLSNLQQQQ

A0A6J1JMY4 mediator of RNA polymerase II transcription subunit 15a-like isoform X19.2e-10665.63Show/hide
Query:  EPGVESSKDWRSELPPDSRQRHVDSIMETLKRYLPVSGDEALSMLKKIAGWFEEKIYTAATNQSDYLRKIYLKLLAMETKFQDHPMGDSLLSNSVVPSTE
        E GV++  DWRS+L PDSR R V+ IMETLKR+LPVSG E LS L+KIA  FEEKIY AAT+QSDYLRKI LK+L METK Q      +L SNS+VP+ +
Subjt:  EPGVESSKDWRSELPPDSRQRHVDSIMETLKRYLPVSGDEALSMLKKIAGWFEEKIYTAATNQSDYLRKIYLKLLAMETKFQDHPMGDSLLSNSVVPSTE

Query:  PLDSTSQSMQPQALNQGHSMPVPMSSNLPQSHQQLLS--------AQISSSLPSAVSPIAGLASASMPNIVGPNRTMRNVSGVPQSSVGNSMGLGVRSNV
        PLDSTSQSMQ Q LNQG SM  PMSSN PQ  QQLLS        +Q SSSLPS+V P+AGLASA M NIVG N +M+NVSGVPQSSVGN+MG GV +NV
Subjt:  PLDSTSQSMQPQALNQGHSMPVPMSSNLPQSHQQLLS--------AQISSSLPSAVSPIAGLASASMPNIVGPNRTMRNVSGVPQSSVGNSMGLGVRSNV

Query:  FSNSQRPIQGRRVVS-----QQQSQNLQQQLLLQQQ-LQLQLQQPIFQQGS---------IPQQQQNLMPPNQLQSSQQPVLQTSSVMLQQNQQSPIQQP
        F+NSQRPIQGR+VVS     QQQSQ+ QQQL  QQQ LQ Q+ +  FQQGS         IPQQQ NLMPPNQLQSSQQ V+Q S   LQQNQQS IQQP
Subjt:  FSNSQRPIQGRRVVS-----QQQSQNLQQQLLLQQQ-LQLQLQQPIFQQGS---------IPQQQQNLMPPNQLQSSQQPVLQTSSVMLQQNQQSPIQQP

Query:  TQSMIQQPPQPVLRQHQQSQQHPFLHRQPTMPQQINLPSQQQQQLIS-QPKFSNMQ-----QNSIGEM-QQLIRQSRSYGQQSNLLNL-----------Q
        TQSM+QQPPQPVLRQ QQSQQH  LH+QPTM QQ +L SQQQQQLI+ Q   SNMQ     QNS+G+M QQL +QSRS+GQQSNL N+           Q
Subjt:  TQSMIQQPPQPVLRQHQQSQQHPFLHRQPTMPQQINLPSQQQQQLIS-QPKFSNMQ-----QNSIGEM-QQLIRQSRSYGQQSNLLNL-----------Q

Query:  QQQQLMAQLSNLSNLQQQQ
        QQQQLM Q S+LSNLQQ Q
Subjt:  QQQQLMAQLSNLSNLQQQQ

SwissProt top hitse value%identityAlignment
F4I171 Mediator of RNA polymerase II transcription subunit 15a2.7e-4639.44Show/hide
Query:  PNMCMEEPGVESSKDWRSELPPDSRQRHVDSIMETLKRYLPVSGDEALSMLKKIAGWFEEKIYTAATNQSDYLRKIYLKLLAMETKFQDHPMGDSLLSNS
        P++   EP +++  DWR++LPPDSRQ+ V+ IMETLK++LP SG E ++ L++IA  FEEKI++ A NQ+DYLRKI +K+L METK Q     ++  S++
Subjt:  PNMCMEEPGVESSKDWRSELPPDSRQRHVDSIMETLKRYLPVSGDEALSMLKKIAGWFEEKIYTAATNQSDYLRKIYLKLLAMETKFQDHPMGDSLLSNS

Query:  VVPSTEPLDSTSQSMQPQALNQGHSMPVPMSSNLPQSHQQLLSAQI----------SSSLPSAVSPIAGLASASMPNIVGPNRTMRNVSGVPQSSVGNSM
         +P+     +   S+     NQG  +P  +S+N  Q+ Q LLS  +          S++LPS++ P++ + + +  ++V  N  M+NV+G+ Q S G   
Subjt:  VVPSTEPLDSTSQSMQPQALNQGHSMPVPMSSNLPQSHQQLLSAQI----------SSSLPSAVSPIAGLASASMPNIVGPNRTMRNVSGVPQSSVGNSM

Query:  GLGVRSNVFSNSQRPIQGRRVVSQQQSQNLQQQLLLQQQLQLQLQQPIFQQGSIP-----------QQQQNLMPPNQLQSSQQPVLQTSSVM--------
          G+ SN+FS  QR + GR      Q Q  QQ  L QQQLQ QL +  FQ G++P           QQQQN++ PNQL SSQQP + TS+          
Subjt:  GLGVRSNVFSNSQRPIQGRRVVSQQQSQNLQQQLLLQQQLQLQLQQPIFQQGSIP-----------QQQQNLMPPNQLQSSQQPVLQTSSVM--------

Query:  ---LQQNQQS----PIQQPTQSMIQQPPQPVLRQHQQSQQHPFLH-RQPTMPQQINLPSQQQQQLISQPKFSN---------MQQNSIGEMQQLIRQSRS
           L  NQQS      QQ TQSM++Q    +LRQH QSQQ   +H +Q ++PQQ   P QQQ   + + + +N         M Q+ +G+MQQ   Q R 
Subjt:  ---LQQNQQS----PIQQPTQSMIQQPPQPVLRQHQQSQQHPFLH-RQPTMPQQINLPSQQQQQLISQPKFSN---------MQQNSIGEMQQLIRQSRS

Query:  YGQQSNLLNLQQQQQLMAQLSNLSNLQQQQR
          QQ+N++N+QQQQ   +Q   L   QQQQ+
Subjt:  YGQQSNLLNLQQQQQLMAQLSNLSNLQQQQR

Arabidopsis top hitse value%identityAlignment
AT1G15780.1 unknown protein1.9e-4739.44Show/hide
Query:  PNMCMEEPGVESSKDWRSELPPDSRQRHVDSIMETLKRYLPVSGDEALSMLKKIAGWFEEKIYTAATNQSDYLRKIYLKLLAMETKFQDHPMGDSLLSNS
        P++   EP +++  DWR++LPPDSRQ+ V+ IMETLK++LP SG E ++ L++IA  FEEKI++ A NQ+DYLRKI +K+L METK Q     ++  S++
Subjt:  PNMCMEEPGVESSKDWRSELPPDSRQRHVDSIMETLKRYLPVSGDEALSMLKKIAGWFEEKIYTAATNQSDYLRKIYLKLLAMETKFQDHPMGDSLLSNS

Query:  VVPSTEPLDSTSQSMQPQALNQGHSMPVPMSSNLPQSHQQLLSAQI----------SSSLPSAVSPIAGLASASMPNIVGPNRTMRNVSGVPQSSVGNSM
         +P+     +   S+     NQG  +P  +S+N  Q+ Q LLS  +          S++LPS++ P++ + + +  ++V  N  M+NV+G+ Q S G   
Subjt:  VVPSTEPLDSTSQSMQPQALNQGHSMPVPMSSNLPQSHQQLLSAQI----------SSSLPSAVSPIAGLASASMPNIVGPNRTMRNVSGVPQSSVGNSM

Query:  GLGVRSNVFSNSQRPIQGRRVVSQQQSQNLQQQLLLQQQLQLQLQQPIFQQGSIP-----------QQQQNLMPPNQLQSSQQPVLQTSSVM--------
          G+ SN+FS  QR + GR      Q Q  QQ  L QQQLQ QL +  FQ G++P           QQQQN++ PNQL SSQQP + TS+          
Subjt:  GLGVRSNVFSNSQRPIQGRRVVSQQQSQNLQQQLLLQQQLQLQLQQPIFQQGSIP-----------QQQQNLMPPNQLQSSQQPVLQTSSVM--------

Query:  ---LQQNQQS----PIQQPTQSMIQQPPQPVLRQHQQSQQHPFLH-RQPTMPQQINLPSQQQQQLISQPKFSN---------MQQNSIGEMQQLIRQSRS
           L  NQQS      QQ TQSM++Q    +LRQH QSQQ   +H +Q ++PQQ   P QQQ   + + + +N         M Q+ +G+MQQ   Q R 
Subjt:  ---LQQNQQS----PIQQPTQSMIQQPPQPVLRQHQQSQQHPFLH-RQPTMPQQINLPSQQQQQLISQPKFSN---------MQQNSIGEMQQLIRQSRS

Query:  YGQQSNLLNLQQQQQLMAQLSNLSNLQQQQR
          QQ+N++N+QQQQ   +Q   L   QQQQ+
Subjt:  YGQQSNLLNLQQQQQLMAQLSNLSNLQQQQR

AT1G15790.1 unknown protein2.8e-1439.34Show/hide
Query:  VESSKDWRSELPPDSRQRHVDSIMETLKRYLPVSGDEALSMLKKIAGWFEEKIYTAATNQSDYLRKIYLKLLAMETKFQDHPMGDS-------LLSNSVV
        ++++ DWR++ P  SR R V+ IMET  + LP    E  + L+KIA  FEEK++  A+NQ++YLR+I +K+L METK Q+     S       L+    V
Subjt:  VESSKDWRSELPPDSRQRHVDSIMETLKRYLPVSGDEALSMLKKIAGWFEEKIYTAATNQSDYLRKIYLKLLAMETKFQDHPMGDS-------LLSNSVV

Query:  PSTEPLDSTS--QSMQPQALNQ
        P+ EP  +T   ++ QPQ   Q
Subjt:  PSTEPLDSTS--QSMQPQALNQ

AT1G15790.2 unknown protein2.8e-1439.34Show/hide
Query:  VESSKDWRSELPPDSRQRHVDSIMETLKRYLPVSGDEALSMLKKIAGWFEEKIYTAATNQSDYLRKIYLKLLAMETKFQDHPMGDS-------LLSNSVV
        ++++ DWR++ P  SR R V+ IMET  + LP    E  + L+KIA  FEEK++  A+NQ++YLR+I +K+L METK Q+     S       L+    V
Subjt:  VESSKDWRSELPPDSRQRHVDSIMETLKRYLPVSGDEALSMLKKIAGWFEEKIYTAATNQSDYLRKIYLKLLAMETKFQDHPMGDS-------LLSNSVV

Query:  PSTEPLDSTS--QSMQPQALNQ
        P+ EP  +T   ++ QPQ   Q
Subjt:  PSTEPLDSTS--QSMQPQALNQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATCCAAATATGTGTATGGAGGAACCTGGAGTTGAGTCCTCGAAGGATTGGAGGTCTGAATTGCCGCCTGATTCGCGGCAGCGACATGTCGATTCGATAATGGA
GACATTGAAGAGGTACCTTCCCGTTTCTGGTGACGAGGCATTGAGTATGCTGAAAAAAATTGCCGGATGGTTTGAGGAAAAGATTTATACTGCCGCTACCAATCAGTCAG
ATTACTTGAGAAAAATATATCTGAAGCTGCTTGCTATGGAAACCAAATTTCAGGATCATCCTATGGGAGATTCATTACTGTCCAATTCAGTGGTGCCTAGCACTGAGCCT
CTGGATTCTACATCACAGAGCATGCAGCCTCAAGCTTTAAATCAAGGGCATTCAATGCCTGTCCCCATGTCTTCCAATCTGCCTCAGTCACACCAACAACTACTCTCTGC
TCAGATTTCATCCAGCTTACCTTCTGCAGTATCTCCGATCGCTGGATTGGCTTCAGCTTCAATGCCAAACATTGTTGGCCCGAATCGAACAATGCGAAATGTATCGGGAG
TTCCACAAAGTTCTGTTGGGAATTCTATGGGTCTAGGTGTTCGTTCTAATGTATTTTCCAACTCTCAGAGGCCAATACAAGGAAGACGTGTAGTTTCTCAACAGCAGTCA
CAAAACCTACAGCAACAATTATTATTACAGCAACAACTACAGTTGCAATTGCAACAGCCGATATTTCAGCAGGGAAGTATACCACAACAACAACAGAATCTAATGCCACC
AAACCAACTCCAATCATCTCAGCAACCTGTTTTACAAACTTCATCTGTTATGCTTCAGCAAAACCAGCAATCTCCCATTCAACAACCCACTCAATCCATGATTCAGCAAC
CTCCACAGCCAGTTCTAAGGCAACATCAACAATCCCAACAACATCCTTTTCTTCACCGGCAGCCTACAATGCCTCAACAGATAAACTTGCCTTCACAGCAGCAACAGCAG
CTTATTAGTCAACCAAAATTTTCAAACATGCAGCAAAACAGTATTGGGGAAATGCAGCAGCTGATTCGGCAATCAAGGTCGTATGGGCAGCAGAGCAATTTATTAAATTT
GCAGCAGCAGCAGCAGTTAATGGCTCAGCTAAGCAACCTATCAAATTTGCAGCAGCAGCAACGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGATCCAAATATGTGTATGGAGGAACCTGGAGTTGAGTCCTCGAAGGATTGGAGGTCTGAATTGCCGCCTGATTCGCGGCAGCGACATGTCGATTCGATAATGGA
GACATTGAAGAGGTACCTTCCCGTTTCTGGTGACGAGGCATTGAGTATGCTGAAAAAAATTGCCGGATGGTTTGAGGAAAAGATTTATACTGCCGCTACCAATCAGTCAG
ATTACTTGAGAAAAATATATCTGAAGCTGCTTGCTATGGAAACCAAATTTCAGGATCATCCTATGGGAGATTCATTACTGTCCAATTCAGTGGTGCCTAGCACTGAGCCT
CTGGATTCTACATCACAGAGCATGCAGCCTCAAGCTTTAAATCAAGGGCATTCAATGCCTGTCCCCATGTCTTCCAATCTGCCTCAGTCACACCAACAACTACTCTCTGC
TCAGATTTCATCCAGCTTACCTTCTGCAGTATCTCCGATCGCTGGATTGGCTTCAGCTTCAATGCCAAACATTGTTGGCCCGAATCGAACAATGCGAAATGTATCGGGAG
TTCCACAAAGTTCTGTTGGGAATTCTATGGGTCTAGGTGTTCGTTCTAATGTATTTTCCAACTCTCAGAGGCCAATACAAGGAAGACGTGTAGTTTCTCAACAGCAGTCA
CAAAACCTACAGCAACAATTATTATTACAGCAACAACTACAGTTGCAATTGCAACAGCCGATATTTCAGCAGGGAAGTATACCACAACAACAACAGAATCTAATGCCACC
AAACCAACTCCAATCATCTCAGCAACCTGTTTTACAAACTTCATCTGTTATGCTTCAGCAAAACCAGCAATCTCCCATTCAACAACCCACTCAATCCATGATTCAGCAAC
CTCCACAGCCAGTTCTAAGGCAACATCAACAATCCCAACAACATCCTTTTCTTCACCGGCAGCCTACAATGCCTCAACAGATAAACTTGCCTTCACAGCAGCAACAGCAG
CTTATTAGTCAACCAAAATTTTCAAACATGCAGCAAAACAGTATTGGGGAAATGCAGCAGCTGATTCGGCAATCAAGGTCGTATGGGCAGCAGAGCAATTTATTAAATTT
GCAGCAGCAGCAGCAGTTAATGGCTCAGCTAAGCAACCTATCAAATTTGCAGCAGCAGCAACGTTAG
Protein sequenceShow/hide protein sequence
MEDPNMCMEEPGVESSKDWRSELPPDSRQRHVDSIMETLKRYLPVSGDEALSMLKKIAGWFEEKIYTAATNQSDYLRKIYLKLLAMETKFQDHPMGDSLLSNSVVPSTEP
LDSTSQSMQPQALNQGHSMPVPMSSNLPQSHQQLLSAQISSSLPSAVSPIAGLASASMPNIVGPNRTMRNVSGVPQSSVGNSMGLGVRSNVFSNSQRPIQGRRVVSQQQS
QNLQQQLLLQQQLQLQLQQPIFQQGSIPQQQQNLMPPNQLQSSQQPVLQTSSVMLQQNQQSPIQQPTQSMIQQPPQPVLRQHQQSQQHPFLHRQPTMPQQINLPSQQQQQ
LISQPKFSNMQQNSIGEMQQLIRQSRSYGQQSNLLNLQQQQQLMAQLSNLSNLQQQQR