CuGenDBv2

Gene ID	Sed0024393
Organism	Sechium edule (Chayote v1)
Description	Nuclear transcription factor Y subunit
Genome location	LG08:19611324..19627358
RNA-Seq Expression	Sed0024393
Synteny	Sed0024393
Gene Ontology terms	GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0016602 - CCAAT-binding factor complex (cellular component) GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function) GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domains	IPR001289 - Nuclear transcription factor Y subunit A IPR018362 - CCAAT-binding factor, conserved site

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004139033.1 nuclear transcription factor Y subunit A-1 [Cucumis sativus]

1.3e-100

73.94

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Query:  MQSKSETDNQLESDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGSKDVQATG
        MQSKSET+NQL+S  NGAP  SIYYEPWW  +GYN  PL VVG NAS STSLEFPN             GGSESNDGQS SNN+VN+EEDD SK+VQATG
Subjt:  MQSKSETDNQLESDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGSKDVQATG

Query:  PPHSA-------QKAQHVSSTLPAMDGECTTQSTQFEPVGHPAACVSNPYPDPYYGGMMPFYGHQPLGYPMVGAPHARMPLPIELAQDPVFVNAKQYQGI
         PHSA       QK QHVSSTLPAM GEC  QSTQ E VGH  AC SNPY DPYYGGMM FYGHQPLGYPMVG PHARMPLPIE+AQDPVFVNAKQYQGI
Subjt:  PPHSA-------QKAQHVSSTLPAMDGECTTQSTQFEPVGHPAACVSNPYPDPYYGGMMPFYGHQPLGYPMVGAPHARMPLPIELAQDPVFVNAKQYQGI

Query:  LRRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQKNRSYLTNKTSE
        LRRRQARAKAEAE+K  KARK Y+HESRHQHAIRRSR +GGRFAKK E +GKE HSDKV ES  R+N+ SEQ+N S LTNK SE
Subjt:  LRRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQKNRSYLTNKTSE

XP_008450422.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis melo]

2.0e-101

74.3

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Query:  MQSKSETDNQLESDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGSKDVQATG
        MQSKSET+NQL  DPNGAP  SIYYEPWW  +GYN  PL VVG NAS STSLEFPN             GGSESNDGQS SNN+VN+EEDD SK+VQATG
Subjt:  MQSKSETDNQLESDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGSKDVQATG

Query:  PPHSA-------QKAQHVSSTLPAMDGECTTQSTQFEPVGHPAACVSNPYPDPYYGGMMPFYGHQPLGYPMVGAPHARMPLPIELAQDPVFVNAKQYQGI
         PHSA       +K QHVSSTLPAM GEC TQSTQ E VGH  AC SNPY DPYYGGMM FYGHQPLGYPMVG PHARMPLPIE+AQDPVFVNAKQYQGI
Subjt:  PPHSA-------QKAQHVSSTLPAMDGECTTQSTQFEPVGHPAACVSNPYPDPYYGGMMPFYGHQPLGYPMVGAPHARMPLPIELAQDPVFVNAKQYQGI

Query:  LRRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQKNRSYLTNKTSE
        LRRRQARAKAEAE+K  KARK Y+HESRHQHAIRRSR +GGRFAKK E DGKE HSDKV ESG R+N+ SEQ+  S L NK SE
Subjt:  LRRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQKNRSYLTNKTSE

XP_008450423.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo]

2.0e-101

74.3

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Query:  MQSKSETDNQLESDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGSKDVQATG
        MQSKSET+NQL  DPNGAP  SIYYEPWW  +GYN  PL VVG NAS STSLEFPN             GGSESNDGQS SNN+VN+EEDD SK+VQATG
Subjt:  MQSKSETDNQLESDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGSKDVQATG

Query:  PPHSA-------QKAQHVSSTLPAMDGECTTQSTQFEPVGHPAACVSNPYPDPYYGGMMPFYGHQPLGYPMVGAPHARMPLPIELAQDPVFVNAKQYQGI
         PHSA       +K QHVSSTLPAM GEC TQSTQ E VGH  AC SNPY DPYYGGMM FYGHQPLGYPMVG PHARMPLPIE+AQDPVFVNAKQYQGI
Subjt:  PPHSA-------QKAQHVSSTLPAMDGECTTQSTQFEPVGHPAACVSNPYPDPYYGGMMPFYGHQPLGYPMVGAPHARMPLPIELAQDPVFVNAKQYQGI

Query:  LRRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQKNRSYLTNKTSE
        LRRRQARAKAEAE+K  KARK Y+HESRHQHAIRRSR +GGRFAKK E DGKE HSDKV ESG R+N+ SEQ+  S L NK SE
Subjt:  LRRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQKNRSYLTNKTSE

XP_022154358.1 nuclear transcription factor Y subunit A-1-like [Momordica charantia]

9.0e-102

72.89

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Query:  MQSKSETDNQLESDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGSKDVQATG
        MQSKSET+NQLESDPNGAP  S+YYEPWW  IGYNP PL VVG N S STSLEFPN             GGSESNDGQS SNN++N+EEDD +K+VQATG
Subjt:  MQSKSETDNQLESDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGSKDVQATG

Query:  PPHS-------AQKAQHVSSTLPAMDGECTTQSTQFEPVGHPAACVSNPYPDPYYGGMMPFYGHQPLGYPMVGAPHARMPLPIELAQDPVFVNAKQYQGI
         PHS       AQK QHVSSTLPAM GEC TQSTQ E VGH  AC SNPY DPYYGGMM FYGHQPLGYPMVGAPHARMPLPIE+AQDPVFVNAKQYQGI
Subjt:  PPHS-------AQKAQHVSSTLPAMDGECTTQSTQFEPVGHPAACVSNPYPDPYYGGMMPFYGHQPLGYPMVGAPHARMPLPIELAQDPVFVNAKQYQGI

Query:  LRRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQKNRSYLTNKTSE
        LRRRQARAKAEAE+K  KARK Y+HESRHQHAIRR+R +GGRFAKKDE +  E+HSDK  ESG  +N+ SEQ+N S   NK S+
Subjt:  LRRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQKNRSYLTNKTSE

XP_038879324.1 nuclear transcription factor Y subunit A-1-like [Benincasa hispida]

2.9e-100

74.3

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Query:  MQSKSETDNQLESDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGSKDVQATG
        MQSKSET+NQL  DPNGAP  SIYYEPWW  +GYN  PL VVG NAS STSLEFPN             GGSESNDGQS SNN+VN+EEDD SK+VQATG
Subjt:  MQSKSETDNQLESDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGSKDVQATG

Query:  PPHS-------AQKAQHVSSTLPAMDGECTTQSTQFEPVGHPAACVSNPYPDPYYGGMMPFYGHQPLGYPMVGAPHARMPLPIELAQDPVFVNAKQYQGI
         PHS       AQK QHVSSTLPAM GEC TQSTQ E VGH  AC SNPY DPYYGGMM FYGHQPLGYPMVG PHARMPLPIE+AQDPVFVNAKQYQGI
Subjt:  PPHS-------AQKAQHVSSTLPAMDGECTTQSTQFEPVGHPAACVSNPYPDPYYGGMMPFYGHQPLGYPMVGAPHARMPLPIELAQDPVFVNAKQYQGI

Query:  LRRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQKNRSYLTNKTSE
        LRRRQARAKAEAE+K  KARK Y+HESRHQHAIRRSR +GGRFAKK+E DGK    DKV ESG R+NE SEQ+N S LTN+ SE
Subjt:  LRRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQKNRSYLTNKTSE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0M2S3 Nuclear transcription factor Y subunit

6.3e-101

73.94

Show/hide

Query:  MQSKSETDNQLESDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGSKDVQATG
        MQSKSET+NQL+S  NGAP  SIYYEPWW  +GYN  PL VVG NAS STSLEFPN             GGSESNDGQS SNN+VN+EEDD SK+VQATG
Subjt:  MQSKSETDNQLESDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGSKDVQATG

Query:  PPHSA-------QKAQHVSSTLPAMDGECTTQSTQFEPVGHPAACVSNPYPDPYYGGMMPFYGHQPLGYPMVGAPHARMPLPIELAQDPVFVNAKQYQGI
         PHSA       QK QHVSSTLPAM GEC  QSTQ E VGH  AC SNPY DPYYGGMM FYGHQPLGYPMVG PHARMPLPIE+AQDPVFVNAKQYQGI
Subjt:  PPHSA-------QKAQHVSSTLPAMDGECTTQSTQFEPVGHPAACVSNPYPDPYYGGMMPFYGHQPLGYPMVGAPHARMPLPIELAQDPVFVNAKQYQGI

Query:  LRRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQKNRSYLTNKTSE
        LRRRQARAKAEAE+K  KARK Y+HESRHQHAIRRSR +GGRFAKK E +GKE HSDKV ES  R+N+ SEQ+N S LTNK SE
Subjt:  LRRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQKNRSYLTNKTSE

A0A1S3BP85 Nuclear transcription factor Y subunit

9.7e-102

74.3

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Query:  MQSKSETDNQLESDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGSKDVQATG
        MQSKSET+NQL  DPNGAP  SIYYEPWW  +GYN  PL VVG NAS STSLEFPN             GGSESNDGQS SNN+VN+EEDD SK+VQATG
Subjt:  MQSKSETDNQLESDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGSKDVQATG

Query:  PPHSA-------QKAQHVSSTLPAMDGECTTQSTQFEPVGHPAACVSNPYPDPYYGGMMPFYGHQPLGYPMVGAPHARMPLPIELAQDPVFVNAKQYQGI
         PHSA       +K QHVSSTLPAM GEC TQSTQ E VGH  AC SNPY DPYYGGMM FYGHQPLGYPMVG PHARMPLPIE+AQDPVFVNAKQYQGI
Subjt:  PPHSA-------QKAQHVSSTLPAMDGECTTQSTQFEPVGHPAACVSNPYPDPYYGGMMPFYGHQPLGYPMVGAPHARMPLPIELAQDPVFVNAKQYQGI

Query:  LRRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQKNRSYLTNKTSE
        LRRRQARAKAEAE+K  KARK Y+HESRHQHAIRRSR +GGRFAKK E DGKE HSDKV ESG R+N+ SEQ+  S L NK SE
Subjt:  LRRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQKNRSYLTNKTSE

A0A1S3BPV3 Nuclear transcription factor Y subunit

9.7e-102

74.3

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Query:  MQSKSETDNQLESDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGSKDVQATG
        MQSKSET+NQL  DPNGAP  SIYYEPWW  +GYN  PL VVG NAS STSLEFPN             GGSESNDGQS SNN+VN+EEDD SK+VQATG
Subjt:  MQSKSETDNQLESDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGSKDVQATG

Query:  PPHSA-------QKAQHVSSTLPAMDGECTTQSTQFEPVGHPAACVSNPYPDPYYGGMMPFYGHQPLGYPMVGAPHARMPLPIELAQDPVFVNAKQYQGI
         PHSA       +K QHVSSTLPAM GEC TQSTQ E VGH  AC SNPY DPYYGGMM FYGHQPLGYPMVG PHARMPLPIE+AQDPVFVNAKQYQGI
Subjt:  PPHSA-------QKAQHVSSTLPAMDGECTTQSTQFEPVGHPAACVSNPYPDPYYGGMMPFYGHQPLGYPMVGAPHARMPLPIELAQDPVFVNAKQYQGI

Query:  LRRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQKNRSYLTNKTSE
        LRRRQARAKAEAE+K  KARK Y+HESRHQHAIRRSR +GGRFAKK E DGKE HSDKV ESG R+N+ SEQ+  S L NK SE
Subjt:  LRRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQKNRSYLTNKTSE

A0A5D3D5Q2 Nuclear transcription factor Y subunit

9.7e-102

74.3

Show/hide

Query:  MQSKSETDNQLESDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGSKDVQATG
        MQSKSET+NQL  DPNGAP  SIYYEPWW  +GYN  PL VVG NAS STSLEFPN             GGSESNDGQS SNN+VN+EEDD SK+VQATG
Subjt:  MQSKSETDNQLESDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGSKDVQATG

Query:  PPHSA-------QKAQHVSSTLPAMDGECTTQSTQFEPVGHPAACVSNPYPDPYYGGMMPFYGHQPLGYPMVGAPHARMPLPIELAQDPVFVNAKQYQGI
         PHSA       +K QHVSSTLPAM GEC TQSTQ E VGH  AC SNPY DPYYGGMM FYGHQPLGYPMVG PHARMPLPIE+AQDPVFVNAKQYQGI
Subjt:  PPHSA-------QKAQHVSSTLPAMDGECTTQSTQFEPVGHPAACVSNPYPDPYYGGMMPFYGHQPLGYPMVGAPHARMPLPIELAQDPVFVNAKQYQGI

Query:  LRRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQKNRSYLTNKTSE
        LRRRQARAKAEAE+K  KARK Y+HESRHQHAIRRSR +GGRFAKK E DGKE HSDKV ESG R+N+ SEQ+  S L NK SE
Subjt:  LRRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQKNRSYLTNKTSE

A0A6J1DK42 Nuclear transcription factor Y subunit

4.4e-102

72.89

Show/hide

Query:  MQSKSETDNQLESDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGSKDVQATG
        MQSKSET+NQLESDPNGAP  S+YYEPWW  IGYNP PL VVG N S STSLEFPN             GGSESNDGQS SNN++N+EEDD +K+VQATG
Subjt:  MQSKSETDNQLESDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGSKDVQATG

Query:  PPHS-------AQKAQHVSSTLPAMDGECTTQSTQFEPVGHPAACVSNPYPDPYYGGMMPFYGHQPLGYPMVGAPHARMPLPIELAQDPVFVNAKQYQGI
         PHS       AQK QHVSSTLPAM GEC TQSTQ E VGH  AC SNPY DPYYGGMM FYGHQPLGYPMVGAPHARMPLPIE+AQDPVFVNAKQYQGI
Subjt:  PPHS-------AQKAQHVSSTLPAMDGECTTQSTQFEPVGHPAACVSNPYPDPYYGGMMPFYGHQPLGYPMVGAPHARMPLPIELAQDPVFVNAKQYQGI

Query:  LRRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQKNRSYLTNKTSE
        LRRRQARAKAEAE+K  KARK Y+HESRHQHAIRR+R +GGRFAKKDE +  E+HSDK  ESG  +N+ SEQ+N S   NK S+
Subjt:  LRRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQKNRSYLTNKTSE

SwissProt top hits

e value

%identity

Alignment

Q84JP1 Nuclear transcription factor Y subunit A-7

1.1e-17

37.85

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Query:  ESNNNVNNEEDDGSKDVQATGPPHSAQKAQHVSSTLPAMDGECTTQSTQFEPVGHPAACVSNPYPDPYYGGMM--PFYGHQPLGYPMVGAPHARMPLPIE
        E ++N+ + E    +D     P  SA+  + + ++L   D   T          +  A    PYPDPYY  +   P   +  +   ++G     +PLP +
Subjt:  ESNNNVNNEEDDGSKDVQATGPPHSAQKAQHVSSTLPAMDGECTTQSTQFEPVGHPAACVSNPYPDPYYGGMM--PFYGHQPLGYPMVGAPHARMPLPIE

Query:  LAQDPVFVNAKQYQGILRRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRF---AKKDEYDGKEIHSDK
          ++PVFVNAKQY GILRRRQ+RA+ E++ K  K+RK Y+HESRH HAIRR R  GGRF    K+DE+     H +K
Subjt:  LAQDPVFVNAKQYQGILRRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRF---AKKDEYDGKEIHSDK

Q8VY64 Nuclear transcription factor Y subunit A-4

2.4e-20

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Query:  AQKAQHVSSTLPAMDGECTTQSTQFEPV-GHPAACVSNPYPDPYYGGMMPFYGHQPLGYP-----MVGAPHARMPLPIELAQDPVFVNAKQYQGILRRRQ
        A+K +  S T P +    +++S     V   P A    PYPDPYY  +     + P  YP     ++G     +PL  +  ++PVFVNAKQY GILRRRQ
Subjt:  AQKAQHVSSTLPAMDGECTTQSTQFEPV-GHPAACVSNPYPDPYYGGMMPFYGHQPLGYP-----MVGAPHARMPLPIELAQDPVFVNAKQYQGILRRRQ

Query:  ARAKAEA-ERKFKARKTYIHESRHQHAIRRSRCNGGRF--AKKDEYDGKE
        +RAK EA  R  KA+K Y+HESRH HAIRR R  GGRF  AKK+  D KE
Subjt:  ARAKAEA-ERKFKARKTYIHESRHQHAIRRSRCNGGRF--AKKDEYDGKE

Q93ZH2 Nuclear transcription factor Y subunit A-3

2.1e-13

36.18

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Query:  GVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDG-SKDVQATGPPHSAQKAQHVSSTLPAMDGECTTQSTQFEPVGHPAACVSN
        G   S S  ++   G  ++     F    S S     +S   V +  DD  S+ +  +    S    +   ++ P         +  F P     A  S 
Subjt:  GVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDG-SKDVQATGPPHSAQKAQHVSSTLPAMDGECTTQSTQFEPVGHPAACVSN

Query:  PYPDPYYGGMM--PFYGHQPLGYP-MVGAPHARMPLPIELAQ-DPVFVNAKQYQGILRRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRF
         Y DP+YGG++   +    P   P MV     R+PLP EL + DPVFVNAKQY  I+RRRQ RAK EA+ K  +ARK Y+HESRH HA++R R +GGRF
Subjt:  PYPDPYYGGMM--PFYGHQPLGYP-MVGAPHARMPLPIELAQ-DPVFVNAKQYQGILRRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRF

Q945M9 Nuclear transcription factor Y subunit A-9

7.1e-33

41.03

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Query:  MQSKSET-DNQLESDPNGAPCASI-YYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESN--NNVNNEEDDGSKDV
        M SKS++  N+++S+ +G   +SI    PW           H      + ++S+E    G +S+      +   ESN  +S SN  N VN       K+ 
Subjt:  MQSKSET-DNQLESDPNGAPCASI-YYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESN--NNVNNEEDDGSKDV

Query:  QATGPPHSAQKAQHVSSTLPAMDGECTTQSTQFEPVGHPAA-CVSNPYPDPYYGGMMPFYGHQPLGY-PMVGAPHARMPLPIELAQDPVFVNAKQYQGIL
        Q T  P SA    +      ++    T      + VGH      SNPY DPYY G+M  YGH PLG+ P  G PH+RMPLP E+AQ+PVFVNAKQYQ IL
Subjt:  QATGPPHSAQKAQHVSSTLPAMDGECTTQSTQFEPVGHPAA-CVSNPYPDPYYGGMMPFYGHQPLGY-PMVGAPHARMPLPIELAQDPVFVNAKQYQGIL

Query:  RRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQKN
        RRRQARAKAE E+K  K+RK Y+HESRHQHA+RR R  GGRFAKK   +  +  ++  ++S   + +S    N
Subjt:  RRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQKN

Q9LXV5 Nuclear transcription factor Y subunit A-1

9.2e-41

43.01

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Query:  MQSKSETDNQLE-SDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGS-KDVQA
        MQSK   +N+ E ++ +      +Y EPWW    +   P        S S+SL+ PN              GSESND  S S +   N E+DG+ KD QA
Subjt:  MQSKSETDNQLE-SDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGS-KDVQA

Query:  TGPPHSAQKAQHVSSTLPAMDGECTTQSTQFEP---VGHPAACVSNPYPDPYYGGMMPFYGHQPLGY-PMVGAPHARMPLPIELAQDPVFVNAKQYQGIL
             S      +    PA+           +P   VGH  ACV NPY DPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GIL
Subjt:  TGPPHSAQKAQHVSSTLPAMDGECTTQSTQFEP---VGHPAACVSNPYPDPYYGGMMPFYGHQPLGY-PMVGAPHARMPLPIELAQDPVFVNAKQYQGIL

Query:  RRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQK
        RRR+ARAKAE ERK  + RK Y+HESRH+HA+RR+R +GGRFAKK E +  E    + +E G   N S  ++
Subjt:  RRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQK

Arabidopsis top hits

e value

%identity

Alignment

AT3G20910.1 nuclear factor Y, subunit A9

5.0e-34

41.03

Show/hide

Query:  MQSKSET-DNQLESDPNGAPCASI-YYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESN--NNVNNEEDDGSKDV
        M SKS++  N+++S+ +G   +SI    PW           H      + ++S+E    G +S+      +   ESN  +S SN  N VN       K+ 
Subjt:  MQSKSET-DNQLESDPNGAPCASI-YYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESN--NNVNNEEDDGSKDV

Query:  QATGPPHSAQKAQHVSSTLPAMDGECTTQSTQFEPVGHPAA-CVSNPYPDPYYGGMMPFYGHQPLGY-PMVGAPHARMPLPIELAQDPVFVNAKQYQGIL
        Q T  P SA    +      ++    T      + VGH      SNPY DPYY G+M  YGH PLG+ P  G PH+RMPLP E+AQ+PVFVNAKQYQ IL
Subjt:  QATGPPHSAQKAQHVSSTLPAMDGECTTQSTQFEPVGHPAA-CVSNPYPDPYYGGMMPFYGHQPLGY-PMVGAPHARMPLPIELAQDPVFVNAKQYQGIL

Query:  RRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQKN
        RRRQARAKAE E+K  K+RK Y+HESRHQHA+RR R  GGRFAKK   +  +  ++  ++S   + +S    N
Subjt:  RRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQKN

AT5G12840.1 nuclear factor Y, subunit A1

6.6e-42

43.01

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Query:  MQSKSETDNQLE-SDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGS-KDVQA
        MQSK   +N+ E ++ +      +Y EPWW    +   P        S S+SL+ PN              GSESND  S S +   N E+DG+ KD QA
Subjt:  MQSKSETDNQLE-SDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGS-KDVQA

Query:  TGPPHSAQKAQHVSSTLPAMDGECTTQSTQFEP---VGHPAACVSNPYPDPYYGGMMPFYGHQPLGY-PMVGAPHARMPLPIELAQDPVFVNAKQYQGIL
             S      +    PA+           +P   VGH  ACV NPY DPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GIL
Subjt:  TGPPHSAQKAQHVSSTLPAMDGECTTQSTQFEP---VGHPAACVSNPYPDPYYGGMMPFYGHQPLGY-PMVGAPHARMPLPIELAQDPVFVNAKQYQGIL

Query:  RRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQK
        RRR+ARAKAE ERK  + RK Y+HESRH+HA+RR+R +GGRFAKK E +  E    + +E G   N S  ++
Subjt:  RRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQK

AT5G12840.2 nuclear factor Y, subunit A1

1.1e-41

43.01

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Query:  MQSKSETDNQLE-SDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGS-KDVQA
        MQSK   +N+ E ++ +      +Y EPWW    +   P        S S+SL+ PN              GSESND  S S +   N E+DG+ KD QA
Subjt:  MQSKSETDNQLE-SDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGS-KDVQA

Query:  TGPPHSAQKAQHVSSTLPAMDGECTTQSTQFEP---VGHPAACVSNPYPDPYYGGMMPFYGHQPLGY-PMVGAPHARMPLPIELAQDPVFVNAKQYQGIL
             S       +   PA+           +P   VGH  ACV NPY DPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GIL
Subjt:  TGPPHSAQKAQHVSSTLPAMDGECTTQSTQFEP---VGHPAACVSNPYPDPYYGGMMPFYGHQPLGY-PMVGAPHARMPLPIELAQDPVFVNAKQYQGIL

Query:  RRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQK
        RRR+ARAKAE ERK  + RK Y+HESRH+HA+RR+R +GGRFAKK E +  E    + +E G   N S  ++
Subjt:  RRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQK

AT5G12840.3 nuclear factor Y, subunit A1

6.6e-42

43.01

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Query:  MQSKSETDNQLE-SDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGS-KDVQA
        MQSK   +N+ E ++ +      +Y EPWW    +   P        S S+SL+ PN              GSESND  S S +   N E+DG+ KD QA
Subjt:  MQSKSETDNQLE-SDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGS-KDVQA

Query:  TGPPHSAQKAQHVSSTLPAMDGECTTQSTQFEP---VGHPAACVSNPYPDPYYGGMMPFYGHQPLGY-PMVGAPHARMPLPIELAQDPVFVNAKQYQGIL
             S      +    PA+           +P   VGH  ACV NPY DPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GIL
Subjt:  TGPPHSAQKAQHVSSTLPAMDGECTTQSTQFEP---VGHPAACVSNPYPDPYYGGMMPFYGHQPLGY-PMVGAPHARMPLPIELAQDPVFVNAKQYQGIL

Query:  RRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQK
        RRR+ARAKAE ERK  + RK Y+HESRH+HA+RR+R +GGRFAKK E +  E    + +E G   N S  ++
Subjt:  RRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQK

AT5G12840.4 nuclear factor Y, subunit A1

1.1e-41

43.01

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Query:  MQSKSETDNQLE-SDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGS-KDVQA
        MQSK   +N+ E ++ +      +Y EPWW    +   P        S S+SL+ PN              GSESND  S S +   N E+DG+ KD QA
Subjt:  MQSKSETDNQLE-SDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGS-KDVQA

Query:  TGPPHSAQKAQHVSSTLPAMDGECTTQSTQFEP---VGHPAACVSNPYPDPYYGGMMPFYGHQPLGY-PMVGAPHARMPLPIELAQDPVFVNAKQYQGIL
             S       +   PA+           +P   VGH  ACV NPY DPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GIL
Subjt:  TGPPHSAQKAQHVSSTLPAMDGECTTQSTQFEP---VGHPAACVSNPYPDPYYGGMMPFYGHQPLGY-PMVGAPHARMPLPIELAQDPVFVNAKQYQGIL

Query:  RRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQK
        RRR+ARAKAE ERK  + RK Y+HESRH+HA+RR+R +GGRFAKK E +  E    + +E G   N S  ++
Subjt:  RRRQARAKAEAERK-FKARKTYIHESRHQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQK

Sequences

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CDS sequence

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ATGCAGTCAAAGTCTGAAACCGATAATCAGCTAGAATCTGATCCGAATGGTGCTCCATGCGCGAGTATTTATTATGAACCCTGGTGGTGTTATATTGGATACAATCCTGC
TCCGTTACATGTGGTAGGCGTAAATGCTTCCTGTTCAACTTCTCTTGAGTTCCCTAATGGTGGTTCAGAGTCAAATGATGGCCAAGAATTCCCTATTGGTGGTTCAGAGT
CAAATGATGGCCAATCTGAGTCAAATAACAACGTAAACAATGAAGAAGATGATGGTTCCAAAGACGTGCAAGCTACTGGACCTCCACATTCAGCTCAGAAGGCGCAGCAT
GTTTCATCTACTTTGCCAGCTATGGATGGTGAATGTACGACGCAGTCTACTCAATTTGAACCTGTTGGTCACCCTGCTGCATGTGTGTCAAATCCATATCCGGATCCATA
TTATGGAGGAATGATGCCTTTCTATGGCCATCAGCCCTTGGGCTATCCTATGGTTGGAGCGCCACATGCTAGAATGCCATTGCCCATTGAACTAGCACAGGACCCTGTTT
TCGTGAACGCAAAACAGTACCAAGGAATTTTGAGGCGAAGGCAAGCACGTGCTAAAGCTGAGGCTGAGAGGAAGTTTAAAGCCAGAAAGACATACATTCATGAATCTAGA
CACCAGCATGCCATAAGAAGGTCGAGGTGTAATGGTGGGCGTTTTGCCAAGAAAGACGAATACGATGGAAAGGAGATACATTCTGATAAAGTAAAGGAGAGTGGTTGCCG
CATAAACGAAAGTTCCGAACAGAAAAACAGAAGCTACTTGACGAACAAGACCTCTGAGTAG

mRNA sequence

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Protein sequence

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MQSKSETDNQLESDPNGAPCASIYYEPWWCYIGYNPAPLHVVGVNASCSTSLEFPNGGSESNDGQEFPIGGSESNDGQSESNNNVNNEEDDGSKDVQATGPPHSAQKAQH
VSSTLPAMDGECTTQSTQFEPVGHPAACVSNPYPDPYYGGMMPFYGHQPLGYPMVGAPHARMPLPIELAQDPVFVNAKQYQGILRRRQARAKAEAERKFKARKTYIHESR
HQHAIRRSRCNGGRFAKKDEYDGKEIHSDKVKESGCRINESSEQKNRSYLTNKTSE

Sed0024393 (gene) of Chayote v1 genome