; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0024428 (gene) of Chayote v1 genome

Gene IDSed0024428
OrganismSechium edule (Chayote v1)
DescriptionNuclear transcription factor Y subunit B-3
Genome locationLG04:45655965..45656958
RNA-Seq ExpressionSed0024428
SyntenySed0024428
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607751.1 hypothetical protein SDJN03_01093, partial [Cucurbita argyrosperma subsp. sororia]7.7e-7163.18Show/hide
Query:  MEKFTEHCASLC----------------SSSKKSRFNFAIVSTLLASICFLTLRFSPSFLTL--LLLIPSFIFLTHKKSDSSRDPLISAVDHRLFDEMPQ
        MEKFT+HCASLC                SSSK+SR N  +VSTLLASICFL+LRFSPSFL+L  LLLIPSF FL +KKSDSS+                 
Subjt:  MEKFTEHCASLC----------------SSSKKSRFNFAIVSTLLASICFLTLRFSPSFLTL--LLLIPSFIFLTHKKSDSSRDPLISAVDHRLFDEMPQ

Query:  RTAEERYAALIGADISSDDGSSSNGGLGSSVDFDHHLFDEMPQRTAAERSAALIGEERSSDDESSSNGGLGSSGDFESDLWMCLDELARNPSFSDDSSSE
            +R   LI           S  G         HLFDE PQRT  E SAA IGEE SSDD+SSSNGG  S GDFESDLWMCLDELARN  FSDDSSSE
Subjt:  RTAEERYAALIGADISSDDGSSSNGGLGSSVDFDHHLFDEMPQRTAAERSAALIGEERSSDDESSSNGGLGSSGDFESDLWMCLDELARNPSFSDDSSSE

Query:  DDDSLIEIPLLTNSSAIRTDSNGELVRNLEMFLPDLLTDSVLKQLGFVELLEEINEEDNLIEIDFSGGLNPVSTACN
        DDDSLIEIPLL  S AIRTDSN ELVRNLE  LPDLL DSVLKQ GFVELLEEINEEDNLIEID S G N VST CN
Subjt:  DDDSLIEIPLLTNSSAIRTDSNGELVRNLEMFLPDLLTDSVLKQLGFVELLEEINEEDNLIEIDFSGGLNPVSTACN

XP_022941469.1 uncharacterized protein LOC111446758 [Cucurbita moschata]2.3e-7063.27Show/hide
Query:  MEKFTEHCASLC--------------SSSKKSRFNFAIVSTLLASICFLTLRFSPSFLTL--LLLIPSFIFLTHKKSDSSRDPLISAVDHRLFDEMPQRT
        MEKFT+HCASLC              SSSK+SR N  +VSTLLASICFL+LRFSPSFL+L  LLLIPSF FL +KKSDSS+                   
Subjt:  MEKFTEHCASLC--------------SSSKKSRFNFAIVSTLLASICFLTLRFSPSFLTL--LLLIPSFIFLTHKKSDSSRDPLISAVDHRLFDEMPQRT

Query:  AEERYAALIGADISSDDGSSSNGGLGSSVDFDHHLFDEMPQRTAAERSAALIGEERSSDDESSSNGGLGSSGDFESDLWMCLDELARNPSFSDDSSSEDD
          +R   LI           S  G         HLFDE PQRT  E SAA IGEE SSDD+SSSNGG  S GDFESDLWMCLDEL RN  FSDDSSSEDD
Subjt:  AEERYAALIGADISSDDGSSSNGGLGSSVDFDHHLFDEMPQRTAAERSAALIGEERSSDDESSSNGGLGSSGDFESDLWMCLDELARNPSFSDDSSSEDD

Query:  DSLIEIPLLTNSSAIRTDSNGELVRNLEMFLPDLLTDSVLKQLGFVELLEEINEEDNLIEIDFSGGLNPVSTACN
        DSLIEIPLL  S AIRTDSN ELVRNLE  LPDLL DSVLKQ GFVELLEEINEEDNLIEID S G N VST CN
Subjt:  DSLIEIPLLTNSSAIRTDSNGELVRNLEMFLPDLLTDSVLKQLGFVELLEEINEEDNLIEIDFSGGLNPVSTACN

XP_022981598.1 uncharacterized protein LOC111480668 [Cucurbita maxima]5.9e-7164.44Show/hide
Query:  MEKFTEHCASLC----------SSSKKSRFNFAIVSTLLASICFLTLRFSPSFLT-LLLLIPSFIFLTHKKSDSSRDPLISAVDHRLFDEMPQRTAEERY
        MEKFT+HCASLC          SSSK+SR N  +VSTLLASICFL+LRFSPSFL+ LLLLIPSF FL +KKSDSS+                     +R 
Subjt:  MEKFTEHCASLC----------SSSKKSRFNFAIVSTLLASICFLTLRFSPSFLT-LLLLIPSFIFLTHKKSDSSRDPLISAVDHRLFDEMPQRTAEERY

Query:  AALIGADISSDDGSSSNGGLGSSVDFDHHLFDEMPQRTAAERSAALIGEERSSDDESSSNGGLGSSGDFESDLWMCLDELARNPSFSDDSSSEDDDSLIE
          LI           S  G         HLFDE PQRT  E SAA IGEE SSDD+SSSNGG  S GDFESDLWMCLDELARN  FSDDSSSEDDDSLIE
Subjt:  AALIGADISSDDGSSSNGGLGSSVDFDHHLFDEMPQRTAAERSAALIGEERSSDDESSSNGGLGSSGDFESDLWMCLDELARNPSFSDDSSSEDDDSLIE

Query:  IPLLTNSSAIRTDSNGELVRNLEMFLPDLLTDSVLKQLGFVELLEEINEEDNLIEIDFSGGLNPVSTACN
        IPLL  S AIRTDSN  LVRNLE  LPDLL DSVLKQ GFVELLEEINEEDNLIEID S G N VST CN
Subjt:  IPLLTNSSAIRTDSNGELVRNLEMFLPDLLTDSVLKQLGFVELLEEINEEDNLIEIDFSGGLNPVSTACN

XP_023524758.1 uncharacterized protein LOC111788599 isoform X1 [Cucurbita pepo subsp. pepo]1.5e-6961.4Show/hide
Query:  MEKFTEHCASLC------------------------SSSKKSRFNFAIVSTLLASICFLTLRFSPSFLT--LLLLIPSFIFLTHKKSDSSRDPLISAVDH
        MEKFT+HCASLC                        SSSK+SR N  +VSTLLASICFL+LRFSPSFLT  LLLLIPSF FL +KKSDSS+         
Subjt:  MEKFTEHCASLC------------------------SSSKKSRFNFAIVSTLLASICFLTLRFSPSFLT--LLLLIPSFIFLTHKKSDSSRDPLISAVDH

Query:  RLFDEMPQRTAEERYAALIGADISSDDGSSSNGGLGSSVDFDHHLFDEMPQRTAAERSAALIGEERSSDDESSSNGGLGSSGDFESDLWMCLDELARNPS
                    +R   LI           S  G         HLFDE PQRT  E SAA IGEE SSDD+SSSNGG  S GDFESDLWMCLDELA N  
Subjt:  RLFDEMPQRTAEERYAALIGADISSDDGSSSNGGLGSSVDFDHHLFDEMPQRTAAERSAALIGEERSSDDESSSNGGLGSSGDFESDLWMCLDELARNPS

Query:  FSDDSSSEDDDSLIEIPLLTNSSAIRTDSNGELVRNLEMFLPDLLTDSVLKQLGFVELLEEINEEDNLIEIDFSGGLNPVSTACN
        FSDDSSSEDDDSLIEIPLL  S AIRTDSN ELVRNLE  LPDLL DSVLKQ GFVELLEEINEEDNLIEID S G N VST CN
Subjt:  FSDDSSSEDDDSLIEIPLLTNSSAIRTDSNGELVRNLEMFLPDLLTDSVLKQLGFVELLEEINEEDNLIEIDFSGGLNPVSTACN

XP_023524760.1 uncharacterized protein LOC111788599 isoform X2 [Cucurbita pepo subsp. pepo]1.0e-7063.64Show/hide
Query:  MEKFTEHCASLC--------------SSSKKSRFNFAIVSTLLASICFLTLRFSPSFLT--LLLLIPSFIFLTHKKSDSSRDPLISAVDHRLFDEMPQRT
        MEKFT+HCASLC              SSSK+SR N  +VSTLLASICFL+LRFSPSFLT  LLLLIPSF FL +KKSDSS+                   
Subjt:  MEKFTEHCASLC--------------SSSKKSRFNFAIVSTLLASICFLTLRFSPSFLT--LLLLIPSFIFLTHKKSDSSRDPLISAVDHRLFDEMPQRT

Query:  AEERYAALIGADISSDDGSSSNGGLGSSVDFDHHLFDEMPQRTAAERSAALIGEERSSDDESSSNGGLGSSGDFESDLWMCLDELARNPSFSDDSSSEDD
          +R   LI           S  G         HLFDE PQRT  E SAA IGEE SSDD+SSSNGG  S GDFESDLWMCLDELA N  FSDDSSSEDD
Subjt:  AEERYAALIGADISSDDGSSSNGGLGSSVDFDHHLFDEMPQRTAAERSAALIGEERSSDDESSSNGGLGSSGDFESDLWMCLDELARNPSFSDDSSSEDD

Query:  DSLIEIPLLTNSSAIRTDSNGELVRNLEMFLPDLLTDSVLKQLGFVELLEEINEEDNLIEIDFSGGLNPVSTACN
        DSLIEIPLL  S AIRTDSN ELVRNLE  LPDLL DSVLKQ GFVELLEEINEEDNLIEID S G N VST CN
Subjt:  DSLIEIPLLTNSSAIRTDSNGELVRNLEMFLPDLLTDSVLKQLGFVELLEEINEEDNLIEIDFSGGLNPVSTACN

TrEMBL top hitse value%identityAlignment
A0A0A0K6W9 Uncharacterized protein4.9e-4751.84Show/hide
Query:  MEKFTEHCASLCSSSK---KSRFNFAIVSTLLASICFLTLRFSPSFLT--LLLLIPSFIFLTHKKSDSSRDPLISAVDHRLFDEMPQRTAEERYAALIGA
        MEKFT HC+SL SSS    +SRFN  I STLLASI FLTLRFSPSF T  LLLLIP+ +F+ +KKS    +PL                           
Subjt:  MEKFTEHCASLCSSSK---KSRFNFAIVSTLLASICFLTLRFSPSFLT--LLLLIPSFIFLTHKKSDSSRDPLISAVDHRLFDEMPQRTAEERYAALIGA

Query:  DISSDDGSSSNGGLGSSVDFDHHLFDEMPQRTAAERSAALIGEERSSDDE-----SSSNGGLGSSGDFESDLWMCLDELARNPSFSDDSSS---EDDDSL
                             HHLFDE PQ T  + S   IG+  SSDDE     SS++GGLG SGDF+SDLWM LDEL RN   S+D SS   +DDDSL
Subjt:  DISSDDGSSSNGGLGSSVDFDHHLFDEMPQRTAAERSAALIGEERSSDDE-----SSSNGGLGSSGDFESDLWMCLDELARNPSFSDDSSS---EDDDSL

Query:  IEIPLLTNSSAIRTDSNGELVRNLEMFLPDLLTDSVLKQLGFVELLEEINEEDNLIEIDFSGGLNPVSTACN
        IEIPLL NS+ I         RNLE  LP+LL DSVL+Q GFVELLEEINEEDNLIEID S G N   T CN
Subjt:  IEIPLLTNSSAIRTDSNGELVRNLEMFLPDLLTDSVLKQLGFVELLEEINEEDNLIEIDFSGGLNPVSTACN

A0A2N9IRF2 Uncharacterized protein2.0e-0847.83Show/hide
Query:  SDDESSSNGGLGSSGDFESDLWMCLDELARNPSFSDDS-SSEDDDSLIEIPLLTNSSAIRTDSNGELVRNLEMFLPDLLTDSVLKQLGFVELLEEI---N
        SD ESS++  +G S  FE +L MC + + +N +FSD S S EDDDSLIEI L  + S      + E  +  +  LPDLL +S+ +Q G +ELL EI   N
Subjt:  SDDESSSNGGLGSSGDFESDLWMCLDELARNPSFSDDS-SSEDDDSLIEIPLLTNSSAIRTDSNGELVRNLEMFLPDLLTDSVLKQLGFVELLEEI---N

Query:  EEDNLIEIDFSGGLN
        EE+NLIEID S G N
Subjt:  EEDNLIEIDFSGGLN

A0A5D3C7W2 Uncharacterized protein9.3e-4651.09Show/hide
Query:  MEKFTEHCASLCSSSK---KSRFNFAIVSTLLASICFL-TLRFSPSFLT--LLLLIPSFIFLTHKKSDSSRDPLISAVDHRLFDEMPQRTAEERYAALIG
        MEKFT HC+SL SSS    +SRFN  I STLLASI FL TLRFSPSF T  LLLL+P+ +FL ++KS S                               
Subjt:  MEKFTEHCASLCSSSK---KSRFNFAIVSTLLASICFL-TLRFSPSFLT--LLLLIPSFIFLTHKKSDSSRDPLISAVDHRLFDEMPQRTAEERYAALIG

Query:  ADISSDDGSSSNGGLGSSVDFDHHLFDEMPQRTAAERSAALIGEERSSDDE--------SSSNGGLGSSGDFESDLWMCLDELARNPSFSDDSSS---ED
                             DHHLFDE    T  + SA  IGE  SSDDE        SS++GGLG SGDF+SDLWM LDEL RN   S+D SS   +D
Subjt:  ADISSDDGSSSNGGLGSSVDFDHHLFDEMPQRTAAERSAALIGEERSSDDE--------SSSNGGLGSSGDFESDLWMCLDELARNPSFSDDSSS---ED

Query:  DDSLIEIPLLTNSSAIRTDSNGELVRNLEMFLPDLLTDSVLKQLGFVELLEEINEEDNLIEIDFSGGLNPVSTACN
        DDSLIEIPLL NS+ I         RNLE  LP+LL DSVL+Q GFVELLEEINEEDNLIEID S G N  ST CN
Subjt:  DDSLIEIPLLTNSSAIRTDSNGELVRNLEMFLPDLLTDSVLKQLGFVELLEEINEEDNLIEIDFSGGLNPVSTACN

A0A6J1FNF5 uncharacterized protein LOC1114467581.1e-7063.27Show/hide
Query:  MEKFTEHCASLC--------------SSSKKSRFNFAIVSTLLASICFLTLRFSPSFLTL--LLLIPSFIFLTHKKSDSSRDPLISAVDHRLFDEMPQRT
        MEKFT+HCASLC              SSSK+SR N  +VSTLLASICFL+LRFSPSFL+L  LLLIPSF FL +KKSDSS+                   
Subjt:  MEKFTEHCASLC--------------SSSKKSRFNFAIVSTLLASICFLTLRFSPSFLTL--LLLIPSFIFLTHKKSDSSRDPLISAVDHRLFDEMPQRT

Query:  AEERYAALIGADISSDDGSSSNGGLGSSVDFDHHLFDEMPQRTAAERSAALIGEERSSDDESSSNGGLGSSGDFESDLWMCLDELARNPSFSDDSSSEDD
          +R   LI           S  G         HLFDE PQRT  E SAA IGEE SSDD+SSSNGG  S GDFESDLWMCLDEL RN  FSDDSSSEDD
Subjt:  AEERYAALIGADISSDDGSSSNGGLGSSVDFDHHLFDEMPQRTAAERSAALIGEERSSDDESSSNGGLGSSGDFESDLWMCLDELARNPSFSDDSSSEDD

Query:  DSLIEIPLLTNSSAIRTDSNGELVRNLEMFLPDLLTDSVLKQLGFVELLEEINEEDNLIEIDFSGGLNPVSTACN
        DSLIEIPLL  S AIRTDSN ELVRNLE  LPDLL DSVLKQ GFVELLEEINEEDNLIEID S G N VST CN
Subjt:  DSLIEIPLLTNSSAIRTDSNGELVRNLEMFLPDLLTDSVLKQLGFVELLEEINEEDNLIEIDFSGGLNPVSTACN

A0A6J1J2I9 uncharacterized protein LOC1114806682.9e-7164.44Show/hide
Query:  MEKFTEHCASLC----------SSSKKSRFNFAIVSTLLASICFLTLRFSPSFLT-LLLLIPSFIFLTHKKSDSSRDPLISAVDHRLFDEMPQRTAEERY
        MEKFT+HCASLC          SSSK+SR N  +VSTLLASICFL+LRFSPSFL+ LLLLIPSF FL +KKSDSS+                     +R 
Subjt:  MEKFTEHCASLC----------SSSKKSRFNFAIVSTLLASICFLTLRFSPSFLT-LLLLIPSFIFLTHKKSDSSRDPLISAVDHRLFDEMPQRTAEERY

Query:  AALIGADISSDDGSSSNGGLGSSVDFDHHLFDEMPQRTAAERSAALIGEERSSDDESSSNGGLGSSGDFESDLWMCLDELARNPSFSDDSSSEDDDSLIE
          LI           S  G         HLFDE PQRT  E SAA IGEE SSDD+SSSNGG  S GDFESDLWMCLDELARN  FSDDSSSEDDDSLIE
Subjt:  AALIGADISSDDGSSSNGGLGSSVDFDHHLFDEMPQRTAAERSAALIGEERSSDDESSSNGGLGSSGDFESDLWMCLDELARNPSFSDDSSSEDDDSLIE

Query:  IPLLTNSSAIRTDSNGELVRNLEMFLPDLLTDSVLKQLGFVELLEEINEEDNLIEIDFSGGLNPVSTACN
        IPLL  S AIRTDSN  LVRNLE  LPDLL DSVLKQ GFVELLEEINEEDNLIEID S G N VST CN
Subjt:  IPLLTNSSAIRTDSNGELVRNLEMFLPDLLTDSVLKQLGFVELLEEINEEDNLIEIDFSGGLNPVSTACN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGTTCACAGAACACTGCGCTTCACTCTGTTCATCTTCGAAGAAATCACGCTTCAATTTCGCCATTGTTTCCACTCTTCTAGCTTCAATTTGCTTCCTCACTCT
CCGATTCTCCCCTTCCTTCCTCACTCTCCTCCTTCTAATCCCTTCCTTCATCTTCCTCACACACAAAAAATCCGATTCCAGCCGCGATCCGCTCATCTCCGCCGTCGACC
ACCGCCTGTTCGACGAAATGCCTCAAAGAACGGCGGAAGAGCGATACGCCGCGCTAATCGGAGCAGACATTTCTTCCGATGATGGAAGTAGTAGCAATGGCGGATTAGGA
AGTAGCGTAGATTTCGACCACCACCTGTTCGACGAAATGCCTCAAAGAACAGCGGCAGAGCGATCCGCCGCGCTAATCGGTGAAGAGCGTTCTTCTGACGATGAAAGCAG
TAGCAATGGCGGATTAGGAAGTAGCGGAGATTTCGAATCCGATCTCTGGATGTGTTTGGACGAACTGGCTCGGAATCCTTCGTTTTCTGACGATTCGAGTTCCGAAGACG
ACGATAGCTTGATCGAAATTCCTCTTCTCACAAACTCGAGCGCGATTCGAACGGATTCGAACGGAGAATTAGTTCGAAATCTGGAGATGTTTTTGCCTGATTTGTTAACG
GATTCTGTTTTGAAACAGCTCGGATTTGTGGAGCTTTTGGAAGAAATCAATGAGGAAGATAACTTGATCGAGATCGATTTTTCCGGAGGCTTGAATCCAGTTTCCACCGC
TTGTAACTGA
mRNA sequenceShow/hide mRNA sequence
ACAACATGGGTTTTTACATTTCACTTTCCAAACTTCTCTCTACCTCCGATAATGGAGAAGTTCACAGAACACTGCGCTTCACTCTGTTCATCTTCGAAGAAATCACGCTT
CAATTTCGCCATTGTTTCCACTCTTCTAGCTTCAATTTGCTTCCTCACTCTCCGATTCTCCCCTTCCTTCCTCACTCTCCTCCTTCTAATCCCTTCCTTCATCTTCCTCA
CACACAAAAAATCCGATTCCAGCCGCGATCCGCTCATCTCCGCCGTCGACCACCGCCTGTTCGACGAAATGCCTCAAAGAACGGCGGAAGAGCGATACGCCGCGCTAATC
GGAGCAGACATTTCTTCCGATGATGGAAGTAGTAGCAATGGCGGATTAGGAAGTAGCGTAGATTTCGACCACCACCTGTTCGACGAAATGCCTCAAAGAACAGCGGCAGA
GCGATCCGCCGCGCTAATCGGTGAAGAGCGTTCTTCTGACGATGAAAGCAGTAGCAATGGCGGATTAGGAAGTAGCGGAGATTTCGAATCCGATCTCTGGATGTGTTTGG
ACGAACTGGCTCGGAATCCTTCGTTTTCTGACGATTCGAGTTCCGAAGACGACGATAGCTTGATCGAAATTCCTCTTCTCACAAACTCGAGCGCGATTCGAACGGATTCG
AACGGAGAATTAGTTCGAAATCTGGAGATGTTTTTGCCTGATTTGTTAACGGATTCTGTTTTGAAACAGCTCGGATTTGTGGAGCTTTTGGAAGAAATCAATGAGGAAGA
TAACTTGATCGAGATCGATTTTTCCGGAGGCTTGAATCCAGTTTCCACCGCTTGTAACTGAAGGATGAAATTCAGGTACAAAATCTGAGAAGTTTAATCGACACTTTTCG
TCTGTAATTTGATATTGTTCATCTCTTTTTTTTGTAACTGTTTTTGTTCTTAATTTGATTGTGATGATACTTTATTAGATTAGTGGTAAAAGAGCTGTTTCGATTTAAGT
TAAA
Protein sequenceShow/hide protein sequence
MEKFTEHCASLCSSSKKSRFNFAIVSTLLASICFLTLRFSPSFLTLLLLIPSFIFLTHKKSDSSRDPLISAVDHRLFDEMPQRTAEERYAALIGADISSDDGSSSNGGLG
SSVDFDHHLFDEMPQRTAAERSAALIGEERSSDDESSSNGGLGSSGDFESDLWMCLDELARNPSFSDDSSSEDDDSLIEIPLLTNSSAIRTDSNGELVRNLEMFLPDLLT
DSVLKQLGFVELLEEINEEDNLIEIDFSGGLNPVSTACN