; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0024456 (gene) of Chayote v1 genome

Gene IDSed0024456
OrganismSechium edule (Chayote v1)
DescriptionTLC domain-containing protein
Genome locationLG11:25893287..25896119
RNA-Seq ExpressionSed0024456
SyntenySed0024456
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR006634 - TRAM/LAG1/CLN8 homology domain
IPR042512 - TLC domain-containing protein 5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598466.1 TLC domain-containing protein 5, partial [Cucurbita argyrosperma subsp. sororia]8.0e-6170.79Show/hide
Query:  MASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIG
        +ASISVQ+WRCPICPLAS++SPFQMQTLA++CSYLIYDMVCC FDKKV++DN IHHL+ I GI AG AYQKCGSEMVAALW+TEISSPFLHLREILKEIG
Subjt:  MASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIG

Query:  YRGTDLNLVADVS-RLLNSF----------FLLLLIRRMIMRRIAMGLGLQLVSAYWFYKIVRMVRFKLTNRSALKNS
        YRGTDLNL AD+   ++ SF          ++ L    + +   AM LGLQLVSAYWFYKIVRM+RFKL NRS  KNS
Subjt:  YRGTDLNLVADVS-RLLNSF----------FLLLLIRRMIMRRIAMGLGLQLVSAYWFYKIVRMVRFKLTNRSALKNS

KAG7029404.1 Transmembrane protein, partial [Cucurbita argyrosperma subsp. argyrosperma]6.1e-6171.35Show/hide
Query:  MASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIG
        +ASISVQ+WRCPICPLAS++SPFQMQTLA++CSYLIYDMVCC FDKKV++DN IHHL+ I GI AG AYQKCGSEMVAALW+TEISSPFLHLREILKEIG
Subjt:  MASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIG

Query:  YRGTDLNLVADVS-RLLNSF----------FLLLLIRRMIMRRIAMGLGLQLVSAYWFYKIVRMVRFKLTNRSALKNS
        YRGTDLNL AD+   ++ SF          ++ L    + +   AM LGLQLVSAYWFYKIVRMVRFKL NRS  KNS
Subjt:  YRGTDLNLVADVS-RLLNSF----------FLLLLIRRMIMRRIAMGLGLQLVSAYWFYKIVRMVRFKLTNRSALKNS

XP_004152683.2 TLC domain-containing protein 5 isoform X1 [Cucumis sativus]8.5e-6373.45Show/hide
Query:  MASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIG
        +ASISVQ+WRCPICPLASKSS FQMQTL++SCSYLIYDMVCC FDKKVS+DNTIHHL+SI GI AGLAYQKCGSEMVAALW+TEISSPFLHLREILKEIG
Subjt:  MASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIG

Query:  YRGTDLNLVADV--------SRLLNSFFL--LLLIRRMIMRRIAMGLGLQLVSAYWFYKIVRMVRFKLTNRSALKNS
        Y+GTDLNL AD+        +R++   +L  + L   +     AM LGLQLVSAYWFYKIVRM+RFKL NRS LK S
Subjt:  YRGTDLNLVADV--------SRLLNSFFL--LLLIRRMIMRRIAMGLGLQLVSAYWFYKIVRMVRFKLTNRSALKNS

XP_008444752.1 PREDICTED: transmembrane protein 136 [Cucumis melo]1.5e-6273.45Show/hide
Query:  MASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIG
        +ASISVQ+WRCPICPLASKSS FQMQTL +SCSYLIYDMVCC FDKKVS+DNTIHHL+SI GI AG AYQKCGSEMVAALW+TEISSPFLHLREILKE G
Subjt:  MASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIG

Query:  YRGTDLNLVADV--------SRLLNSFFL--LLLIRRMIMRRIAMGLGLQLVSAYWFYKIVRMVRFKLTNRSALKNS
        YRGTDLNL AD+        +R++   +L  + L   +     AM LGLQLVSAYWFYKIVRM+RFKL NRS LKNS
Subjt:  YRGTDLNLVADV--------SRLLNSFFL--LLLIRRMIMRRIAMGLGLQLVSAYWFYKIVRMVRFKLTNRSALKNS

XP_038886579.1 TLC domain-containing protein 5-like [Benincasa hispida]1.1e-6273.45Show/hide
Query:  MASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIG
        +ASISV++WRCPICPLAS+SSPFQMQTLA+SCSYLIYDMVCC FDKKVS+DNTIHHL+SI GI AG AYQKCGSEMVAALW+TEISSPFLHLREILKEIG
Subjt:  MASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIG

Query:  YRGTDLNLVADV--------SRLLNSFFL--LLLIRRMIMRRIAMGLGLQLVSAYWFYKIVRMVRFKLTNRSALKNS
        Y+GTDLNL AD+        +R++   +L  + L   +     AM LGLQLVSAYWFYKIVRMVRFKL NR  LKNS
Subjt:  YRGTDLNLVADV--------SRLLNSFFL--LLLIRRMIMRRIAMGLGLQLVSAYWFYKIVRMVRFKLTNRSALKNS

TrEMBL top hitse value%identityAlignment
A0A0A0LLI2 TLC domain-containing protein4.1e-6373.45Show/hide
Query:  MASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIG
        +ASISVQ+WRCPICPLASKSS FQMQTL++SCSYLIYDMVCC FDKKVS+DNTIHHL+SI GI AGLAYQKCGSEMVAALW+TEISSPFLHLREILKEIG
Subjt:  MASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIG

Query:  YRGTDLNLVADV--------SRLLNSFFL--LLLIRRMIMRRIAMGLGLQLVSAYWFYKIVRMVRFKLTNRSALKNS
        Y+GTDLNL AD+        +R++   +L  + L   +     AM LGLQLVSAYWFYKIVRM+RFKL NRS LK S
Subjt:  YRGTDLNLVADV--------SRLLNSFFL--LLLIRRMIMRRIAMGLGLQLVSAYWFYKIVRMVRFKLTNRSALKNS

A0A1S3BB19 transmembrane protein 1367.0e-6373.45Show/hide
Query:  MASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIG
        +ASISVQ+WRCPICPLASKSS FQMQTL +SCSYLIYDMVCC FDKKVS+DNTIHHL+SI GI AG AYQKCGSEMVAALW+TEISSPFLHLREILKE G
Subjt:  MASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIG

Query:  YRGTDLNLVADV--------SRLLNSFFL--LLLIRRMIMRRIAMGLGLQLVSAYWFYKIVRMVRFKLTNRSALKNS
        YRGTDLNL AD+        +R++   +L  + L   +     AM LGLQLVSAYWFYKIVRM+RFKL NRS LKNS
Subjt:  YRGTDLNLVADV--------SRLLNSFFL--LLLIRRMIMRRIAMGLGLQLVSAYWFYKIVRMVRFKLTNRSALKNS

A0A5A7VDR0 Transmembrane protein 1367.0e-6373.45Show/hide
Query:  MASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIG
        +ASISVQ+WRCPICPLASKSS FQMQTL +SCSYLIYDMVCC FDKKVS+DNTIHHL+SI GI AG AYQKCGSEMVAALW+TEISSPFLHLREILKE G
Subjt:  MASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIG

Query:  YRGTDLNLVADV--------SRLLNSFFL--LLLIRRMIMRRIAMGLGLQLVSAYWFYKIVRMVRFKLTNRSALKNS
        YRGTDLNL AD+        +R++   +L  + L   +     AM LGLQLVSAYWFYKIVRM+RFKL NRS LKNS
Subjt:  YRGTDLNLVADV--------SRLLNSFFL--LLLIRRMIMRRIAMGLGLQLVSAYWFYKIVRMVRFKLTNRSALKNS

A0A6J1HDN8 transmembrane protein 56-B-like1.2e-5970.22Show/hide
Query:  MASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIG
        +ASISV++WRCPICPLAS++SPFQMQTLA++CSYLIYDMVCC FDKKV++DN IHHL+ I GI AG AYQKCGSEMVAALW+TEISSPFLHLREILKEIG
Subjt:  MASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIG

Query:  YRGTDLNLVADVS-RLLNSF----------FLLLLIRRMIMRRIAMGLGLQLVSAYWFYKIVRMVRFKLTNRSALKNS
         RGTDLNL AD+   ++ SF          ++ L    + +   AM LGLQLVSAYWFYKIVRMVRFKL NRS  KNS
Subjt:  YRGTDLNLVADVS-RLLNSF----------FLLLLIRRMIMRRIAMGLGLQLVSAYWFYKIVRMVRFKLTNRSALKNS

A0A6J1K2K3 transmembrane protein 136-like1.5e-6070.22Show/hide
Query:  MASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIG
        +ASISVQ+WRCPICPLAS++SPFQMQTLA++CSYLIYDMVCC FDKKV++DN IHHL+SI GI AG AYQKCGSEMVAALW+TEISSPFLHLREILKEIG
Subjt:  MASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIG

Query:  YRGTDLNLVAD--------VSRLLNS---FFLLLLIRRMIMRRIAMGLGLQLVSAYWFYKIVRMVRFKLTNRSALKNS
        YRGTD NL AD        + R++      ++ L    + +   AM LGLQLVSAYWFYKIVRMVRFKL +RS  KNS
Subjt:  YRGTDLNLVAD--------VSRLLNS---FFLLLLIRRMIMRRIAMGLGLQLVSAYWFYKIVRMVRFKLTNRSALKNS

SwissProt top hitse value%identityAlignment
Q0VD42 TLC domain-containing protein 51.4e-0731Show/hide
Query:  ASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIGY
        A I   D   P     S ++P Q+  L ++  Y I+D+  C + +        HH +SI GI   L   + G+E+ A L+ +EI++P L +R  L+E G+
Subjt:  ASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIGY

Q1LXV8 TLC domain-containing protein 54.0e-0733.93Show/hide
Query:  PICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIGYRGTDLNLVAD
        P     ++++ FQ+ TL +S  Y ++DM  C + +        HH +SIFGI   L   + G E  A L+ +EI++P L  R  LK +G      +L  D
Subjt:  PICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIGYRGTDLNLVAD

Query:  VSRLLNSFFLLL
        V  LL   F+LL
Subjt:  VSRLLNSFFLLL

Q3TYE7 TLC domain-containing protein 58.1e-0832Show/hide
Query:  ASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIGY
        A I   D   P     S ++P Q+  L ++  Y I+D+  C + +        HH +SI GI   LA  + G+E+ A L+ +EI++P L +R  L+E G+
Subjt:  ASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIGY

Q6ZRR5 TLC domain-containing protein 53.1e-0730Show/hide
Query:  ASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIGY
        A I   D   P     S ++P Q+  L ++  Y I+D+  C + +        HH +SI GI   L   + G+E+ A L+ +E+++P L +R  L+E G+
Subjt:  ASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIGY

Arabidopsis top hitse value%identityAlignment
AT1G35170.1 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein2.0e-4656.07Show/hide
Query:  MASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIG
        +A++S+QDW CP+CP+AS SS  QM+TLA S SY+IYD++C  FD+ +S+DN +HH + I G  AGL YQKCGSEMVAA+W+TEISSPFLHLREILKEIG
Subjt:  MASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIG

Query:  YRGTDLNLVAD--------VSRLLNSFFLLLL---IRRMIMRRIAMGLGLQLVSAYWFYKIVRMVRFKLTNRS
         R TDLNL AD        V+R++   +L+ +       I+ ++ MGLGLQLVSA  FYK+++M+R+K   RS
Subjt:  YRGTDLNLVAD--------VSRLLNSFFLLLL---IRRMIMRRIAMGLGLQLVSAYWFYKIVRMVRFKLTNRS

AT1G35180.1 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein1.0e-5057.47Show/hide
Query:  MASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIG
        +A++S+QDW CP+CP+AS SS  QM+TLA S SY+IYD++C  FD+ +S+DN +HH + I G  AGL YQKCGSEMVAALW+TEISSPFLHLREILKEIG
Subjt:  MASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIG

Query:  YRGTDLNLVADV--------SRLLNSFFLLLLI----RRMIMRRIAMGLGLQLVSAYWFYKIVRMVRFKLTNRS
        YR TDLNL ADV        +R++   +L+ +       ++++  AM LGLQLVSA+WFYKI++M+R+K   RS
Subjt:  YRGTDLNLVADV--------SRLLNSFFLLLLI----RRMIMRRIAMGLGLQLVSAYWFYKIVRMVRFKLTNRS

AT1G45010.1 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein6.5e-4556.8Show/hide
Query:  MASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIG
        +A++SVQD  CP+CPLASK S  QM  +A S SY+IYD++CC FD+  S+DN +HH +SI G  AGLAYQK GSE+VA LW+ EISSPF HLREILKEIG
Subjt:  MASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIG

Query:  YRGTDLNLVADV--------SRLLNSFFLL---LLIRRMIMRRIAMGLGLQLVSAYWFYKIVRMVRFKL
        Y+ T LNL ADV        +R++   FL+   L     I  + AMG GLQLVS +WFYKI  M+R+KL
Subjt:  YRGTDLNLVADV--------SRLLNSFFLL---LLIRRMIMRRIAMGLGLQLVSAYWFYKIVRMVRFKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATCTCGGTCCAAGATTGGCGATGCCCGATTTGCCCTCTTGCTTCTAAGTCTTCACCATTTCAGATGCAAACATTGGCAATGAGCTGCTCTTATTTGATTTA
TGATATGGTGTGTTGCTGCTTTGACAAGAAAGTGAGTATGGACAATACCATCCATCACTTGATTAGCATTTTTGGAATATATGCAGGCCTTGCTTATCAAAAGTGTGGGT
CAGAGATGGTAGCAGCATTGTGGATGACAGAGATCTCAAGCCCCTTTCTCCATTTAAGGGAAATTCTCAAAGAAATTGGTTATAGAGGCACTGACCTTAATTTGGTAGCT
GATGTAAGTCGGCTTTTAAATTCTTTTTTTCTTCTTCTTTTAATAAGGAGAATGATTATGAGAAGAATTGCCATGGGGCTGGGATTGCAGCTTGTTAGTGCCTACTGGTT
TTACAAGATAGTGAGAATGGTGAGATTCAAACTCACAAACAGATCTGCATTGAAGAATAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCATCTCGGTCCAAGATTGGCGATGCCCGATTTGCCCTCTTGCTTCTAAGTCTTCACCATTTCAGATGCAAACATTGGCAATGAGCTGCTCTTATTTGATTTA
TGATATGGTGTGTTGCTGCTTTGACAAGAAAGTGAGTATGGACAATACCATCCATCACTTGATTAGCATTTTTGGAATATATGCAGGCCTTGCTTATCAAAAGTGTGGGT
CAGAGATGGTAGCAGCATTGTGGATGACAGAGATCTCAAGCCCCTTTCTCCATTTAAGGGAAATTCTCAAAGAAATTGGTTATAGAGGCACTGACCTTAATTTGGTAGCT
GATGTAAGTCGGCTTTTAAATTCTTTTTTTCTTCTTCTTTTAATAAGGAGAATGATTATGAGAAGAATTGCCATGGGGCTGGGATTGCAGCTTGTTAGTGCCTACTGGTT
TTACAAGATAGTGAGAATGGTGAGATTCAAACTCACAAACAGATCTGCATTGAAGAATAGTTAG
Protein sequenceShow/hide protein sequence
MASISVQDWRCPICPLASKSSPFQMQTLAMSCSYLIYDMVCCCFDKKVSMDNTIHHLISIFGIYAGLAYQKCGSEMVAALWMTEISSPFLHLREILKEIGYRGTDLNLVA
DVSRLLNSFFLLLLIRRMIMRRIAMGLGLQLVSAYWFYKIVRMVRFKLTNRSALKNS