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Sed0024471 (gene) of Chayote v1 genome

Gene IDSed0024471
OrganismSechium edule (Chayote v1)
Description18.1 kDa class I heat shock protein-like
Genome locationLG04:25368999..25369361
RNA-Seq ExpressionSed0024471
SyntenySed0024471
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0009408 - response to heat (biological process)
GO:0009651 - response to salt stress (biological process)
GO:0042542 - response to hydrogen peroxide (biological process)
GO:0051259 - protein complex oligomerization (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0043621 - protein self-association (molecular function)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR002068 - Alpha crystallin/Hsp20 domain
IPR008978 - HSP20-like chaperone
IPR031107 - Small heat shock protein HSP20


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADU55783.1 HSP22.8 [Citrullus lanatus]9.9e-3768.8Show/hide
Query:  MSIRFSNFFPTDRRERYYVEDRPTYDKCPEERGP---------FHKFSEDRRPERYHVEDRRPYDQFQEKEALAG-AFRSSSAGNAQIDWKETADAHVFR
        MS+RFSNFFPTDR+ERYYVEDRP   KCPE+R           F KF +DR+ ERY+VEDR  Y QF EK+ +A   FR+SSA NAQIDWKETADAHVF+
Subjt:  MSIRFSNFFPTDRRERYYVEDRPTYDKCPEERGP---------FHKFSEDRRPERYHVEDRRPYDQFQEKEALAG-AFRSSSAGNAQIDWKETADAHVFR

Query:  LELPGVKKHEVKLEIEDNGVLCIST
        L+LPGVKKHEVKLEIE++GVLCIST
Subjt:  LELPGVKKHEVKLEIEDNGVLCIST

KAG6596377.1 17.3 kDa class I heat shock protein, partial [Cucurbita argyrosperma subsp. sororia]7.8e-3465.89Show/hide
Query:  MSIRFSNFFPTDRRERYYVEDRPTYDKCP---------EERGPFHKFSEDRRPERYHVEDRRPYDQFQEKEALAGAFR-----SSSAGNAQIDWKETADA
        MSIRF+ FFPTDR+ERYYVEDRP+  K           E+R  F KF E+++ ERY+++DR  YDQF EK+ALAG FR     +SSA NAQID+KETADA
Subjt:  MSIRFSNFFPTDRRERYYVEDRPTYDKCP---------EERGPFHKFSEDRRPERYHVEDRRPYDQFQEKEALAGAFR-----SSSAGNAQIDWKETADA

Query:  HVFRLELPGVKKHEVKLEIEDNGVLCIST
        HV RLELPGVKKHEVKLEIEDNG LCIST
Subjt:  HVFRLELPGVKKHEVKLEIEDNGVLCIST

KAG7027926.1 17.3 kDa class I heat shock protein, partial [Cucurbita argyrosperma subsp. argyrosperma]7.8e-3465.89Show/hide
Query:  MSIRFSNFFPTDRRERYYVEDRPTYDKCP---------EERGPFHKFSEDRRPERYHVEDRRPYDQFQEKEALAGAFR-----SSSAGNAQIDWKETADA
        MSIRF+ FFPTDR+ERYYVEDRP+  K           E+R  F KF E+++ ERY+++DR  YDQF EK+ALAG FR     +SSA NAQID+KETADA
Subjt:  MSIRFSNFFPTDRRERYYVEDRPTYDKCP---------EERGPFHKFSEDRRPERYHVEDRRPYDQFQEKEALAGAFR-----SSSAGNAQIDWKETADA

Query:  HVFRLELPGVKKHEVKLEIEDNGVLCIST
        HV RLELPGVKKHEVKLEIEDNG LCIST
Subjt:  HVFRLELPGVKKHEVKLEIEDNGVLCIST

XP_023539337.1 18.1 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo]2.4e-3567.44Show/hide
Query:  MSIRFSNFFPTDRRERYYVEDRPTYDKCP---------EERGPFHKFSEDRRPERYHVEDRRPYDQFQEKEALAGAFR-----SSSAGNAQIDWKETADA
        MSIRF+NFFPTDR+ERYYVEDRP+  K P         E+R  F KF E+++ ERY+++DR  YDQF EK+ALAG FR     +SSA NAQID+KETADA
Subjt:  MSIRFSNFFPTDRRERYYVEDRPTYDKCP---------EERGPFHKFSEDRRPERYHVEDRRPYDQFQEKEALAGAFR-----SSSAGNAQIDWKETADA

Query:  HVFRLELPGVKKHEVKLEIEDNGVLCIST
        HV RLELPGVKKHEVKLEIEDNG LCIST
Subjt:  HVFRLELPGVKKHEVKLEIEDNGVLCIST

XP_038904007.1 18.1 kDa class I heat shock protein-like [Benincasa hispida]1.7e-3364.62Show/hide
Query:  MSIRFSNFFPTDRRERYYVEDRPTYDKCP---------EERGPFHKFSEDRRPERYHVEDRRPYDQFQEKEALAG-AFR-----SSSAGNAQIDWKETAD
        MSIRFSNFFP DR+ERYYVEDR   +KCP         E+R  + K  +DR+ ERY++EDR  Y QF EK+ +A   FR     +SSA NAQIDWKETAD
Subjt:  MSIRFSNFFPTDRRERYYVEDRPTYDKCP---------EERGPFHKFSEDRRPERYHVEDRRPYDQFQEKEALAG-AFR-----SSSAGNAQIDWKETAD

Query:  AHVFRLELPGVKKHEVKLEIEDNGVLCIST
        AHVFRL+LPGVKKHEVKLEIE+NGVLCIST
Subjt:  AHVFRLELPGVKKHEVKLEIEDNGVLCIST

TrEMBL top hitse value%identityAlignment
A0A5A7TKV7 18.1 kDa class I heat shock protein-like4.8e-2959.85Show/hide
Query:  MSIR-FSNFFPTDRRERYYVEDRPTYDKCP---------EERGPFHKFSEDRRPERYHVEDRRPYDQFQEKEAL-AGAFR------SSSAGNAQIDWKET
        MS R  S+FFPT+R+E+YYVEDR   +KCP         E+R  F KF +DR+ ERY+VEDR  Y QF EK+ +   +FR      SS+A NAQIDWKET
Subjt:  MSIR-FSNFFPTDRRERYYVEDRPTYDKCP---------EERGPFHKFSEDRRPERYHVEDRRPYDQFQEKEAL-AGAFR------SSSAGNAQIDWKET

Query:  ADAHVFRLELPGVKKHEVKLEIEDNGVLCIST
        ADA+VF+L+LPGVKKHE+KLEIEDNG LCIST
Subjt:  ADAHVFRLELPGVKKHEVKLEIEDNGVLCIST

A0A6J1CWJ7 16.9 kDa class I heat shock protein 3-like9.6e-3056.64Show/hide
Query:  MSIRFSNFFPTDRRERYYVEDRPTYDKCPEER---------GPFHK---------------FSEDRRPERYHVEDRRPYDQFQEKEALAGAFRS-----S
        MSIRFSN FP+DR+ERYY EDR + D+ P ER           FH+               F EDR+ ERY+VE+R  YD   +K A+AG FRS     S
Subjt:  MSIRFSNFFPTDRRERYYVEDRPTYDKCPEER---------GPFHK---------------FSEDRRPERYHVEDRRPYDQFQEKEALAGAFRS-----S

Query:  SAGNAQIDWKETADAHVFRLELPGVKKHEVKLEIEDNGVLCIS
        SA NA IDWKETADAHVFR+ELPGVKKHEVK+E+E+NGVLCIS
Subjt:  SAGNAQIDWKETADAHVFRLELPGVKKHEVKLEIEDNGVLCIS

A0A6J1FM77 18.1 kDa class I heat shock protein-like1.1e-3364.34Show/hide
Query:  MSIRFSNFFPTDRRERYYVEDRPTYDKCP---------EERGPFHKFSEDRRPERYHVEDRRPYDQFQEKEALAGAFR-----SSSAGNAQIDWKETADA
        MSIRF++FFPTDR+ERYYVEDRP+  K           E+R  F KF E+++ ERY+++DR  YDQF EK+ALAG FR     +SSA NAQ+D+KETADA
Subjt:  MSIRFSNFFPTDRRERYYVEDRPTYDKCP---------EERGPFHKFSEDRRPERYHVEDRRPYDQFQEKEALAGAFR-----SSSAGNAQIDWKETADA

Query:  HVFRLELPGVKKHEVKLEIEDNGVLCIST
        HV RLELPG+KKHEVKLEIEDNG LCIST
Subjt:  HVFRLELPGVKKHEVKLEIEDNGVLCIST

A0A6J1I321 17.3 kDa class I heat shock protein-like3.2e-3365.12Show/hide
Query:  MSIRFSNFFPTDRRERYYVEDRPTYDKCP---------EERGPFHKFSEDRRPERYHVEDRRPYDQFQEKEALAGAFR-----SSSAGNAQIDWKETADA
        MSIRF+NFFPTDR+ERY VEDRP+  K P         E+R  F KF E+++ ERY+++DR  YDQF EK+ALA  FR     +SSA NAQ D+KETADA
Subjt:  MSIRFSNFFPTDRRERYYVEDRPTYDKCP---------EERGPFHKFSEDRRPERYHVEDRRPYDQFQEKEALAGAFR-----SSSAGNAQIDWKETADA

Query:  HVFRLELPGVKKHEVKLEIEDNGVLCIST
        HV RLELPGVKKHEVKLEIEDNG LCIST
Subjt:  HVFRLELPGVKKHEVKLEIEDNGVLCIST

H6TB36 HSP22.84.8e-3768.8Show/hide
Query:  MSIRFSNFFPTDRRERYYVEDRPTYDKCPEERGP---------FHKFSEDRRPERYHVEDRRPYDQFQEKEALAG-AFRSSSAGNAQIDWKETADAHVFR
        MS+RFSNFFPTDR+ERYYVEDRP   KCPE+R           F KF +DR+ ERY+VEDR  Y QF EK+ +A   FR+SSA NAQIDWKETADAHVF+
Subjt:  MSIRFSNFFPTDRRERYYVEDRPTYDKCPEERGP---------FHKFSEDRRPERYHVEDRRPYDQFQEKEALAG-AFRSSSAGNAQIDWKETADAHVFR

Query:  LELPGVKKHEVKLEIEDNGVLCIST
        L+LPGVKKHEVKLEIE++GVLCIST
Subjt:  LELPGVKKHEVKLEIEDNGVLCIST

SwissProt top hitse value%identityAlignment
P12810 16.9 kDa class I heat shock protein 19.6e-1150.79Show/hide
Query:  PYDQFQE-KEALAGAFRSSSA-GNAQIDWKETADAHVFRLELPGVKKHEVKLEIEDNGVLCIS
        P+D F+    A++G    ++A  NA++DWKET +AHVF+++LPGVKK EVK+E+ED  VL +S
Subjt:  PYDQFQE-KEALAGAFRSSSA-GNAQIDWKETADAHVFRLELPGVKKHEVKLEIEDNGVLCIS

Q05832 18.3 kDa class I heat shock protein8.2e-1060.42Show/hide
Query:  AFRSSSAGNAQIDWKETADAHVFRLELPGVKKHEVKLEIEDNGVLCIS
        A  +++  NA+IDWKET +AHVF+ +LPGVKK EVK+E+ED  VL IS
Subjt:  AFRSSSAGNAQIDWKETADAHVFRLELPGVKKHEVKLEIEDNGVLCIS

Q41560 16.9 kDa class I heat shock protein 23.7e-1050.79Show/hide
Query:  PYDQFQE-KEALAGAFRSSSA-GNAQIDWKETADAHVFRLELPGVKKHEVKLEIEDNGVLCIS
        P+D F+    A++G    ++A  NA++DWKET +AHVF+ +LPGVKK EVK+E+ED  VL +S
Subjt:  PYDQFQE-KEALAGAFRSSSA-GNAQIDWKETADAHVFRLELPGVKKHEVKLEIEDNGVLCIS

Q9LNW0 17.8 kDa class I heat shock protein3.3e-1154.1Show/hide
Query:  PYDQFQEKEALAGAFRSSSAGNAQIDWKETADAHVFRLELPGVKKHEVKLEIEDNGVLCIS
        P+ + Q   +L+G   +S+  NA++DWKETA+AHVF+ +LPG+KK EVK+EIED+ VL IS
Subjt:  PYDQFQEKEALAGAFRSSSAGNAQIDWKETADAHVFRLELPGVKKHEVKLEIEDNGVLCIS

Q9XIE3 17.6 kDa class I heat shock protein 17.4e-1155Show/hide
Query:  YDQFQEKEALAGAFRSSSAGNAQIDWKETADAHVFRLELPGVKKHEVKLEIEDNGVLCIS
        +D F+E +  + +  SS+  NA++DWKETA+AHVF+ +LPG+KK EVK+EIED+ VL IS
Subjt:  YDQFQEKEALAGAFRSSSAGNAQIDWKETADAHVFRLELPGVKKHEVKLEIEDNGVLCIS

Arabidopsis top hitse value%identityAlignment
AT1G07400.1 HSP20-like chaperones superfamily protein2.4e-1254.1Show/hide
Query:  PYDQFQEKEALAGAFRSSSAGNAQIDWKETADAHVFRLELPGVKKHEVKLEIEDNGVLCIS
        P+ + Q   +L+G   +S+  NA++DWKETA+AHVF+ +LPG+KK EVK+EIED+ VL IS
Subjt:  PYDQFQEKEALAGAFRSSSAGNAQIDWKETADAHVFRLELPGVKKHEVKLEIEDNGVLCIS

AT1G53540.1 HSP20-like chaperones superfamily protein6.4e-1046.03Show/hide
Query:  PYDQFQEKEALAGAFRSSSAG--NAQIDWKETADAHVFRLELPGVKKHEVKLEIEDNGVLCIS
        P++ F     LA A     A   NA++DW+ET +AHVF+ +LPG++K EVK+E+ED  +L IS
Subjt:  PYDQFQEKEALAGAFRSSSAG--NAQIDWKETADAHVFRLELPGVKKHEVKLEIEDNGVLCIS

AT1G59860.1 HSP20-like chaperones superfamily protein5.2e-1255Show/hide
Query:  YDQFQEKEALAGAFRSSSAGNAQIDWKETADAHVFRLELPGVKKHEVKLEIEDNGVLCIS
        +D F+E +  + +  SS+  NA++DWKETA+AHVF+ +LPG+KK EVK+EIED+ VL IS
Subjt:  YDQFQEKEALAGAFRSSSAGNAQIDWKETADAHVFRLELPGVKKHEVKLEIEDNGVLCIS

AT2G29500.1 HSP20-like chaperones superfamily protein1.3e-1041.56Show/hide
Query:  FSEDRRPERYHVEDRRPYDQFQEKEALAGAFRSSSAGNAQIDWKETADAHVFRLELPGVKKHEVKLEIEDNGVLCIS
        F+ +RR   +       +D F+E  + + +  +S+  NA++DW+ET +AHVF+ +LPG+KK EVK+EIE++ VL IS
Subjt:  FSEDRRPERYHVEDRRPYDQFQEKEALAGAFRSSSAGNAQIDWKETADAHVFRLELPGVKKHEVKLEIEDNGVLCIS

AT5G59720.1 heat shock protein 18.22.2e-1051.67Show/hide
Query:  FQEKEALAGAFRSSSAG---NAQIDWKETADAHVFRLELPGVKKHEVKLEIEDNGVLCIS
        F    ALA A  +       NA++DWKET +AHVF+ +LPG+KK EVK+E+ED  VL IS
Subjt:  FQEKEALAGAFRSSSAG---NAQIDWKETADAHVFRLELPGVKKHEVKLEIEDNGVLCIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATCCGATTCAGCAACTTCTTCCCTACCGATCGGAGGGAACGCTACTACGTTGAAGACCGTCCCACATACGACAAGTGCCCCGAGGAACGCGGCCCCTTCCACAA
ATTCTCCGAGGATCGGAGACCGGAGCGCTACCACGTGGAGGATCGGCGTCCCTACGATCAATTCCAGGAGAAAGAGGCTCTCGCCGGAGCCTTCCGTTCTTCCTCCGCGG
GCAATGCTCAGATCGACTGGAAGGAGACGGCGGATGCGCACGTGTTTAGGCTCGAGCTTCCCGGGGTGAAGAAGCACGAGGTGAAACTGGAGATCGAAGACAACGGAGTT
CTGTGCATCAGTACAATGATGCTAGAAACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGATCCGATTCAGCAACTTCTTCCCTACCGATCGGAGGGAACGCTACTACGTTGAAGACCGTCCCACATACGACAAGTGCCCCGAGGAACGCGGCCCCTTCCACAA
ATTCTCCGAGGATCGGAGACCGGAGCGCTACCACGTGGAGGATCGGCGTCCCTACGATCAATTCCAGGAGAAAGAGGCTCTCGCCGGAGCCTTCCGTTCTTCCTCCGCGG
GCAATGCTCAGATCGACTGGAAGGAGACGGCGGATGCGCACGTGTTTAGGCTCGAGCTTCCCGGGGTGAAGAAGCACGAGGTGAAACTGGAGATCGAAGACAACGGAGTT
CTGTGCATCAGTACAATGATGCTAGAAACCTAG
Protein sequenceShow/hide protein sequence
MSIRFSNFFPTDRRERYYVEDRPTYDKCPEERGPFHKFSEDRRPERYHVEDRRPYDQFQEKEALAGAFRSSSAGNAQIDWKETADAHVFRLELPGVKKHEVKLEIEDNGV
LCISTMMLET