; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0024512 (gene) of Chayote v1 genome

Gene IDSed0024512
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein
Genome locationLG08:38483103..38483895
RNA-Seq ExpressionSed0024512
SyntenySed0024512
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583852.1 hypothetical protein SDJN03_19784, partial [Cucurbita argyrosperma subsp. sororia]6.4e-5482.76Show/hide
Query:  IAAVYCSLAVIFLAGISTARDLRPSEHGLEYQNPAATETSSPDTQSFFKGNSWSSSEVALPKAMNTSLPPQFWNRRHADR--AAAGGGGGDHIRGALLVA
        +AAVYCS+AVIFLAG S ARDLRPSEHGLEYQNP A E SSPD QSFFKGNSWSSS+VALPKAMNTSLP Q+WNR H DR  AAA GGGGDHIRGALLVA
Subjt:  IAAVYCSLAVIFLAGISTARDLRPSEHGLEYQNPAATETSSPDTQSFFKGNSWSSSEVALPKAMNTSLPPQFWNRRHADR--AAAGGGGGDHIRGALLVA

Query:  SLVCGVIGVSLLIASAFIYIFKLRKQSSSSRS-SFPETTNIIVNK
        SLVCGVIGVSLLIASAFIY+FK RKQ+ SS S S  ETTNII NK
Subjt:  SLVCGVIGVSLLIASAFIYIFKLRKQSSSSRS-SFPETTNIIVNK

XP_022927447.1 uncharacterized protein LOC111434271 [Cucurbita moschata]8.4e-5482.07Show/hide
Query:  IAAVYCSLAVIFLAGISTARDLRPSEHGLEYQNPAATETSSPDTQSFFKGNSWSSSEVALPKAMNTSLPPQFWNRRHADR--AAAGGGGGDHIRGALLVA
        +AA+YCS+AVIFLAG S ARDLRPSEHGLEYQNP A E SSPD QSFFKGNSWSSS+VALPKAMNTSLP Q+WNR H DR  AAA GGGGDHIRGALLVA
Subjt:  IAAVYCSLAVIFLAGISTARDLRPSEHGLEYQNPAATETSSPDTQSFFKGNSWSSSEVALPKAMNTSLPPQFWNRRHADR--AAAGGGGGDHIRGALLVA

Query:  SLVCGVIGVSLLIASAFIYIFKLRKQSSSSRS-SFPETTNIIVNK
        SLVCGVIGVSLLIASAFIY+FK RKQ+ SS S S  ETTNII NK
Subjt:  SLVCGVIGVSLLIASAFIYIFKLRKQSSSSRS-SFPETTNIIVNK

XP_023000949.1 uncharacterized protein LOC111495232 [Cucurbita maxima]4.2e-5382.64Show/hide
Query:  AAVYCSLAVIFLAGISTARDLRPSEHGLEYQNPAATETSSPDTQSFFKGNSWSSSEVALPKAMNTSLPPQFWNRRHADR--AAAGGGGGDHIRGALLVAS
        AA+YCSLAVIFLAG S ARDLRPSEHGLEYQNP A E SSPD QSFFKGNSWSSS+VALPKAMNTSLP Q+WNR H DR  AAA GG GDHIRGALLVAS
Subjt:  AAVYCSLAVIFLAGISTARDLRPSEHGLEYQNPAATETSSPDTQSFFKGNSWSSSEVALPKAMNTSLPPQFWNRRHADR--AAAGGGGGDHIRGALLVAS

Query:  LVCGVIGVSLLIASAFIYIFKLRKQSSSSRS-SFPETTNIIVNK
        LVCGVIGVSLLIASAFIY+FK RKQ+ SS S S  ETTNII NK
Subjt:  LVCGVIGVSLLIASAFIYIFKLRKQSSSSRS-SFPETTNIIVNK

XP_023519911.1 uncharacterized protein LOC111783236 [Cucurbita pepo subsp. pepo]1.1e-5382.07Show/hide
Query:  IAAVYCSLAVIFLAGISTARDLRPSEHGLEYQNPAATETSSPDTQSFFKGNSWSSSEVALPKAMNTSLPPQFWNRRHADR--AAAGGGGGDHIRGALLVA
        +AA+YCSLAVIFLAG S ARDLRPSEHGLEYQNP A E SSPD QSFFKGNSWSSS+VALPKAMNTSLP Q+WNR H DR  AA  GGGGDHIRGALLVA
Subjt:  IAAVYCSLAVIFLAGISTARDLRPSEHGLEYQNPAATETSSPDTQSFFKGNSWSSSEVALPKAMNTSLPPQFWNRRHADR--AAAGGGGGDHIRGALLVA

Query:  SLVCGVIGVSLLIASAFIYIFKLRKQSSSSRS-SFPETTNIIVNK
        SLVCGVIGVSLLIASAFIY+FK RKQ+ SS S S  ETTNII NK
Subjt:  SLVCGVIGVSLLIASAFIYIFKLRKQSSSSRS-SFPETTNIIVNK

XP_038895122.1 uncharacterized protein LOC120083432 [Benincasa hispida]1.2e-5279.74Show/hide
Query:  AIPSHI---AAVYCSLAVIFLAGISTARDLRPSEHGLEYQNPAATETSSPDTQSFFKGNSWSSSEVALPKAMNTSLPPQFWNRRHADR--AAAGGGGGDH
        AIPS I   AAV+ SLAVI LAGIS ARDLRPSEHGLEYQNP A E SSP  QSFFKGNSWSSS+VALPKAMNTSLPPQ+WNR H +R  AAA GGGGDH
Subjt:  AIPSHI---AAVYCSLAVIFLAGISTARDLRPSEHGLEYQNPAATETSSPDTQSFFKGNSWSSSEVALPKAMNTSLPPQFWNRRHADR--AAAGGGGGDH

Query:  IRGALLVASLVCGVIGVSLLIASAFIYIFKLRKQSSSSRS-SFPETTNIIVNK
        IRGALLVASLVCG+IG+SLLIASAFIY FK RKQS SS S S  ETTNII NK
Subjt:  IRGALLVASLVCGVIGVSLLIASAFIYIFKLRKQSSSSRS-SFPETTNIIVNK

TrEMBL top hitse value%identityAlignment
A0A1S3BC63 uncharacterized protein LOC1034883248.2e-4771.05Show/hide
Query:  IPSHIAAVYCSLA--VIFLAGISTARDLRPSEHGLEYQNPAATETSSPDTQSFFKGNSWSSSEVALPKAMNTSLPPQFWNRRHADRAAAGGGGGDHIRGA
        IPS  A +Y SLA  ++ LA +S ARDLRPSEHGL+YQNP A + SSP  QSFFKGNSWS+S+VALPKAMNTSLPPQ+WNR H +R+ A   GGDHIRGA
Subjt:  IPSHIAAVYCSLA--VIFLAGISTARDLRPSEHGLEYQNPAATETSSPDTQSFFKGNSWSSSEVALPKAMNTSLPPQFWNRRHADRAAAGGGGGDHIRGA

Query:  LLVASLVCGVIGVSLLIASAFIYIFKLRKQSSSSRS----SFPETTNIIVNK
        LLVASLVCG+IGVSLL+ASAFIY FK RKQS SS S    S  ETTNII NK
Subjt:  LLVASLVCGVIGVSLLIASAFIYIFKLRKQSSSSRS----SFPETTNIIVNK

A0A5D3C2L6 Uncharacterized protein8.2e-4771.05Show/hide
Query:  IPSHIAAVYCSLA--VIFLAGISTARDLRPSEHGLEYQNPAATETSSPDTQSFFKGNSWSSSEVALPKAMNTSLPPQFWNRRHADRAAAGGGGGDHIRGA
        IPS  A +Y SLA  ++ LA +S ARDLRPSEHGL+YQNP A + SSP  QSFFKGNSWS+S+VALPKAMNTSLPPQ+WNR H +R+ A   GGDHIRGA
Subjt:  IPSHIAAVYCSLA--VIFLAGISTARDLRPSEHGLEYQNPAATETSSPDTQSFFKGNSWSSSEVALPKAMNTSLPPQFWNRRHADRAAAGGGGGDHIRGA

Query:  LLVASLVCGVIGVSLLIASAFIYIFKLRKQSSSSRS----SFPETTNIIVNK
        LLVASLVCG+IGVSLL+ASAFIY FK RKQS SS S    S  ETTNII NK
Subjt:  LLVASLVCGVIGVSLLIASAFIYIFKLRKQSSSSRS----SFPETTNIIVNK

A0A6J1EH69 uncharacterized protein LOC1114342714.1e-5482.07Show/hide
Query:  IAAVYCSLAVIFLAGISTARDLRPSEHGLEYQNPAATETSSPDTQSFFKGNSWSSSEVALPKAMNTSLPPQFWNRRHADR--AAAGGGGGDHIRGALLVA
        +AA+YCS+AVIFLAG S ARDLRPSEHGLEYQNP A E SSPD QSFFKGNSWSSS+VALPKAMNTSLP Q+WNR H DR  AAA GGGGDHIRGALLVA
Subjt:  IAAVYCSLAVIFLAGISTARDLRPSEHGLEYQNPAATETSSPDTQSFFKGNSWSSSEVALPKAMNTSLPPQFWNRRHADR--AAAGGGGGDHIRGALLVA

Query:  SLVCGVIGVSLLIASAFIYIFKLRKQSSSSRS-SFPETTNIIVNK
        SLVCGVIGVSLLIASAFIY+FK RKQ+ SS S S  ETTNII NK
Subjt:  SLVCGVIGVSLLIASAFIYIFKLRKQSSSSRS-SFPETTNIIVNK

A0A6J1GT11 uncharacterized protein LOC1114567131.2e-4570.59Show/hide
Query:  MAIPSHI---AAVYCSLAVIFLAGISTARDLRPSEHGLEYQNPAATETSSPDTQSFFKGNSWSSSEVALPKAMNTSLPPQFWNRRHADRAAAGGGGGDHI
        MAIPS I   AAVYC LA IF  G S ARDLRPSEHGLEYQNP AT  SS + QSFF+GNSWSSSEV LPKA+NTSLP Q+WNR HA+R+   G GGDHI
Subjt:  MAIPSHI---AAVYCSLAVIFLAGISTARDLRPSEHGLEYQNPAATETSSPDTQSFFKGNSWSSSEVALPKAMNTSLPPQFWNRRHADRAAAGGGGGDHI

Query:  RGALLVASLVCGVIGVSLLIASAFIYIFKLRKQSSSSRSSF--PETTNIIVNK
        RGAL+V SLVCG+IG SLLIASAFIY FK +KQ+S S SS    ET +IIV+K
Subjt:  RGALLVASLVCGVIGVSLLIASAFIYIFKLRKQSSSSRSSF--PETTNIIVNK

A0A6J1KLE3 uncharacterized protein LOC1114952322.0e-5382.64Show/hide
Query:  AAVYCSLAVIFLAGISTARDLRPSEHGLEYQNPAATETSSPDTQSFFKGNSWSSSEVALPKAMNTSLPPQFWNRRHADR--AAAGGGGGDHIRGALLVAS
        AA+YCSLAVIFLAG S ARDLRPSEHGLEYQNP A E SSPD QSFFKGNSWSSS+VALPKAMNTSLP Q+WNR H DR  AAA GG GDHIRGALLVAS
Subjt:  AAVYCSLAVIFLAGISTARDLRPSEHGLEYQNPAATETSSPDTQSFFKGNSWSSSEVALPKAMNTSLPPQFWNRRHADR--AAAGGGGGDHIRGALLVAS

Query:  LVCGVIGVSLLIASAFIYIFKLRKQSSSSRS-SFPETTNIIVNK
        LVCGVIGVSLLIASAFIY+FK RKQ+ SS S S  ETTNII NK
Subjt:  LVCGVIGVSLLIASAFIYIFKLRKQSSSSRS-SFPETTNIIVNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30515.1 unknown protein6.9e-0633.06Show/hide
Query:  VIFLAGISTARDLRPSEHGLEY-----QNPAATETSSPDTQSFFKGNSWSSSEVALPKAMNTSLPPQFWNRRHADRAAAGGGGGDHIRGALLVASLVCGV
        ++  + I  AR+LRPS+HGLEY     ++   T    P + +     S  SS + LP A+ +  P +  ++   D         +H+   L+V SLVCG+
Subjt:  VIFLAGISTARDLRPSEHGLEY-----QNPAATETSSPDTQSFFKGNSWSSSEVALPKAMNTSLPPQFWNRRHADRAAAGGGGGDHIRGALLVASLVCGV

Query:  IGVSLLIASAFIYIFKLRKQSSSS
         GV+L++ASA IY     K  +SS
Subjt:  IGVSLLIASAFIYIFKLRKQSSSS

AT4G21740.1 unknown protein5.1e-0936.13Show/hide
Query:  SHIAAVYCSLAVIFLAGISTARDLRPSEHGLEYQ--NPAATETSSPDTQSFFKGNSWSSSEVALPKAMNTSLPPQFWNRRHADRAAAGG--------GGG
        S I  +  +  VIF  G S A +LRPS+HGL+YQ  +P     S P     F G+S SSS    P   +  L P+         AA GG        G G
Subjt:  SHIAAVYCSLAVIFLAGISTARDLRPSEHGLEYQ--NPAATETSSPDTQSFFKGNSWSSSEVALPKAMNTSLPPQFWNRRHADRAAAGG--------GGG

Query:  ---DHI-RGALLVASLVCGVIGVSLLIASAFIYIFKLRKQSSSSRSSFPETTNII
           DH+ R   L AS++CGV GV+LL+    IY F+ RK + S+  +  ++  II
Subjt:  ---DHI-RGALLVASLVCGVIGVSLLIASAFIYIFKLRKQSSSSRSSFPETTNII


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATTCCGTCGCACATCGCCGCCGTCTACTGCTCCCTCGCCGTCATTTTCCTCGCCGGAATCTCAACCGCGAGGGACCTGCGTCCGTCGGAGCACGGCCTGGAGTA
CCAAAACCCTGCCGCTACCGAAACCTCCTCACCGGACACGCAATCCTTCTTCAAAGGAAACTCCTGGTCCTCCTCCGAGGTCGCGCTTCCCAAGGCGATGAACACCAGCC
TCCCGCCGCAGTTCTGGAATCGCCGTCACGCCGATCGAGCCGCCGCTGGCGGAGGCGGCGGAGATCACATTCGCGGCGCATTGCTTGTGGCGAGTCTGGTATGTGGAGTT
ATAGGCGTTTCCTTACTGATTGCTTCTGCTTTTATTTACATCTTCAAGCTTAGGAAGCAGAGTAGTAGTAGTAGATCGTCGTTCCCTGAAACTACTAACATTATCGTTAA
CAAGTGA
mRNA sequenceShow/hide mRNA sequence
CTCATCCTCCCTCATATAAAACAAACGGCGCCATCGCCTCCCATTTCCACACTCTTTCACAGATTAAAAACCAACCACAAACGCAAACCCACCGTAAATCCATTCCCTAA
AATGGCGATTCCGTCGCACATCGCCGCCGTCTACTGCTCCCTCGCCGTCATTTTCCTCGCCGGAATCTCAACCGCGAGGGACCTGCGTCCGTCGGAGCACGGCCTGGAGT
ACCAAAACCCTGCCGCTACCGAAACCTCCTCACCGGACACGCAATCCTTCTTCAAAGGAAACTCCTGGTCCTCCTCCGAGGTCGCGCTTCCCAAGGCGATGAACACCAGC
CTCCCGCCGCAGTTCTGGAATCGCCGTCACGCCGATCGAGCCGCCGCTGGCGGAGGCGGCGGAGATCACATTCGCGGCGCATTGCTTGTGGCGAGTCTGGTATGTGGAGT
TATAGGCGTTTCCTTACTGATTGCTTCTGCTTTTATTTACATCTTCAAGCTTAGGAAGCAGAGTAGTAGTAGTAGATCGTCGTTCCCTGAAACTACTAACATTATCGTTA
ACAAGTGATTTGTGGATGAACTCGCATGTACATAGCTCTGAGATCTGGTCGCTGATCTTAATTTTGTAAGAGATTCATCTTTTTCTCCTTTGATTTTTCATCTGATTTGT
TTGAATTGAGTTCCTGAACTAGTGTAATTTTTAGATCTACAGATATTCTAGTAGATTATTGCCAATTTCAGATTCATATACAGTTTTTTGTTGTTGCAACTTGGATTTGA
TTTACTGAGATAATGAGCTTCTA
Protein sequenceShow/hide protein sequence
MAIPSHIAAVYCSLAVIFLAGISTARDLRPSEHGLEYQNPAATETSSPDTQSFFKGNSWSSSEVALPKAMNTSLPPQFWNRRHADRAAAGGGGGDHIRGALLVASLVCGV
IGVSLLIASAFIYIFKLRKQSSSSRSSFPETTNIIVNK