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Sed0024529 (gene) of Chayote v1 genome

Gene IDSed0024529
OrganismSechium edule (Chayote v1)
DescriptionDBD_Tnp_Mut domain-containing protein
Genome locationLG04:11494790..11497281
RNA-Seq ExpressionSed0024529
SyntenySed0024529
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046135.1 uncharacterized protein E6C27_scaffold157G00750 [Cucumis melo var. makuwa]6.3e-1640.34Show/hide
Query:  MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFI------------------------------PPFEILEDKGVDWFLTLVKNNGTRHPLVVD
        M K+ IVVFH GQW+   SY  YK +GVLVDE+M FE F+                                 +I EDK V WFL+LVK   TRHPLV  
Subjt:  MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFI------------------------------PPFEILEDKGVDWFLTLVKNNGTRHPLVVD

Query:  A----KNFYLEGTS--SSVVSNSTLLVSSSTIDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCNKSF
        A     N  LE +S   S + N   L+ SS+IDD+      F ++ DI    L   FN+  KD FASKE+L +KSF
Subjt:  A----KNFYLEGTS--SSVVSNSTLLVSSSTIDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCNKSF

KAA0066702.1 uncharacterized protein E6C27_scaffold271G00350 [Cucumis melo var. makuwa]2.4e-1539.77Show/hide
Query:  MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFIP------------------------------PFEILEDKGVDWFLTLVKNNGTRHPLVVD
        M K+ IVVFH GQW+   SY  YK +GVLVDE+M FE F+                                 +I EDK V WFL+LVK + TRHPLV  
Subjt:  MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFIP------------------------------PFEILEDKGVDWFLTLVKNNGTRHPLVVD

Query:  A----KNFYLEGTS--SSVVSNSTLLVSSSTIDDNDGDGVPFHVIKDIR---LDCVFNVK--DTFASKEVLCNKSF
        A     N  LE +S   S + N   L+ SS+IDD+      F ++ DI    L   F++K  D FASKE+L +KSF
Subjt:  A----KNFYLEGTS--SSVVSNSTLLVSSSTIDDNDGDGVPFHVIKDIR---LDCVFNVK--DTFASKEVLCNKSF

TYK14543.1 uncharacterized protein E5676_scaffold552G00250 [Cucumis melo var. makuwa]4.3e-1746.58Show/hide
Query:  MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFIPPFEILEDKGVDWFLTLVKNNGTRHPLVVDA----KNFYLEGTS--SSVVSNSTLLVSSS
        M K+ IVVFH GQW+   SY  YK +GVLVDE+M F+        LEDK V WFL+LVK   TRHPLV  A     N  LE +S   S + N   L+ SS
Subjt:  MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFIPPFEILEDKGVDWFLTLVKNNGTRHPLVVDA----KNFYLEGTS--SSVVSNSTLLVSSS

Query:  TIDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCNKSF
        +IDD+      F ++ DI    L   F++  KD FASKE+L +KSF
Subjt:  TIDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCNKSF

TYK23827.1 MuDR family transposase [Cucumis melo var. makuwa]8.2e-1640.91Show/hide
Query:  MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETF------------------------------IPPFEILEDKGVDWFLTLVKNNGTRHPLV--
        M K+ IVVFH GQW+   SY  YK +GVLVDE+MSFE F                                  +I EDK V WFL+LVK   TRHPLV  
Subjt:  MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETF------------------------------IPPFEILEDKGVDWFLTLVKNNGTRHPLV--

Query:  --VDAKNFYLEGTS--SSVVSNSTLLVSSSTIDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCNKSF
          V   N  LE +S   S + N   L+SSS+IDD+      F ++ DI    L   F++  KD FASKE+L +KSF
Subjt:  --VDAKNFYLEGTS--SSVVSNSTLLVSSSTIDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCNKSF

TYK23827.1 MuDR family transposase [Cucumis melo var. makuwa]4.2e-0478.57Show/hide
Query:  KSFLVNLDTRSCTCRVWDLDEIPCSHAL
        K F+V LD +SCTCRVWDLDEIPC+HAL
Subjt:  KSFLVNLDTRSCTCRVWDLDEIPCSHAL

TYK23827.1 MuDR family transposase [Cucumis melo var. makuwa]1.1e-1540.34Show/hide
Query:  MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFIP------------------------------PFEILEDKGVDWFLTLVKNNGTRHPLVVD
        M K+ IVVFH GQW+   SY  YK  GVLVDE+MSFE F+                                 +I EDK V WFL+LVK + TRHPLV  
Subjt:  MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFIP------------------------------PFEILEDKGVDWFLTLVKNNGTRHPLVVD

Query:  A----KNFYLEGTS--SSVVSNSTLLVSSSTIDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCNKSF
        A     N  LE +S   S + N   L+ SS+IDD+      F ++ DI    L   F++  KD FASKE+L +KSF
Subjt:  A----KNFYLEGTS--SSVVSNSTLLVSSSTIDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCNKSF

TrEMBL top hitse value%identityAlignment
A0A5A7TXI0 DBD_Tnp_Mut domain-containing protein3.0e-1640.34Show/hide
Query:  MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFI------------------------------PPFEILEDKGVDWFLTLVKNNGTRHPLVVD
        M K+ IVVFH GQW+   SY  YK +GVLVDE+M FE F+                                 +I EDK V WFL+LVK   TRHPLV  
Subjt:  MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFI------------------------------PPFEILEDKGVDWFLTLVKNNGTRHPLVVD

Query:  A----KNFYLEGTS--SSVVSNSTLLVSSSTIDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCNKSF
        A     N  LE +S   S + N   L+ SS+IDD+      F ++ DI    L   FN+  KD FASKE+L +KSF
Subjt:  A----KNFYLEGTS--SSVVSNSTLLVSSSTIDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCNKSF

A0A5A7VEB2 DBD_Tnp_Mut domain-containing protein1.2e-1539.77Show/hide
Query:  MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFIP------------------------------PFEILEDKGVDWFLTLVKNNGTRHPLVVD
        M K+ IVVFH GQW+   SY  YK +GVLVDE+M FE F+                                 +I EDK V WFL+LVK + TRHPLV  
Subjt:  MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFIP------------------------------PFEILEDKGVDWFLTLVKNNGTRHPLVVD

Query:  A----KNFYLEGTS--SSVVSNSTLLVSSSTIDDNDGDGVPFHVIKDIR---LDCVFNVK--DTFASKEVLCNKSF
        A     N  LE +S   S + N   L+ SS+IDD+      F ++ DI    L   F++K  D FASKE+L +KSF
Subjt:  A----KNFYLEGTS--SSVVSNSTLLVSSSTIDDNDGDGVPFHVIKDIR---LDCVFNVK--DTFASKEVLCNKSF

A0A5D3CRP1 SWIM-type domain-containing protein2.1e-1746.58Show/hide
Query:  MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFIPPFEILEDKGVDWFLTLVKNNGTRHPLVVDA----KNFYLEGTS--SSVVSNSTLLVSSS
        M K+ IVVFH GQW+   SY  YK +GVLVDE+M F+        LEDK V WFL+LVK   TRHPLV  A     N  LE +S   S + N   L+ SS
Subjt:  MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFIPPFEILEDKGVDWFLTLVKNNGTRHPLVVDA----KNFYLEGTS--SSVVSNSTLLVSSS

Query:  TIDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCNKSF
        +IDD+      F ++ DI    L   F++  KD FASKE+L +KSF
Subjt:  TIDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCNKSF

A0A5D3DJR8 MuDR family transposase4.0e-1640.91Show/hide
Query:  MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETF------------------------------IPPFEILEDKGVDWFLTLVKNNGTRHPLV--
        M K+ IVVFH GQW+   SY  YK +GVLVDE+MSFE F                                  +I EDK V WFL+LVK   TRHPLV  
Subjt:  MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETF------------------------------IPPFEILEDKGVDWFLTLVKNNGTRHPLV--

Query:  --VDAKNFYLEGTS--SSVVSNSTLLVSSSTIDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCNKSF
          V   N  LE +S   S + N   L+SSS+IDD+      F ++ DI    L   F++  KD FASKE+L +KSF
Subjt:  --VDAKNFYLEGTS--SSVVSNSTLLVSSSTIDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCNKSF

A0A5D3DJR8 MuDR family transposase2.0e-0478.57Show/hide
Query:  KSFLVNLDTRSCTCRVWDLDEIPCSHAL
        K F+V LD +SCTCRVWDLDEIPC+HAL
Subjt:  KSFLVNLDTRSCTCRVWDLDEIPCSHAL

A0A5D3DJR8 MuDR family transposase5.2e-1640.34Show/hide
Query:  MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFIP------------------------------PFEILEDKGVDWFLTLVKNNGTRHPLVVD
        M K+ IVVFH GQW+   SY  YK  GVLVDE+MSFE F+                                 +I EDK V WFL+LVK + TRHPLV  
Subjt:  MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFIP------------------------------PFEILEDKGVDWFLTLVKNNGTRHPLVVD

Query:  A----KNFYLEGTS--SSVVSNSTLLVSSSTIDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCNKSF
        A     N  LE +S   S + N   L+ SS+IDD+      F ++ DI    L   F++  KD FASKE+L +KSF
Subjt:  A----KNFYLEGTS--SSVVSNSTLLVSSSTIDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCNKSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAGATTCTTATTGTTGTCTTCCATGGTGGGCAATGGAATGCTAATGGTTCTTATGAGAAGTATAAGATTAGTGGAGTTTTGGTGGATGAACTAATGAGTTTTGA
AACTTTTATACCCCCTTTTGAAATTTTGGAAGATAAAGGCGTGGACTGGTTCTTAACATTAGTTAAGAATAATGGTACAAGACATCCATTAGTGGTTGATGCTAAGAACT
TTTATTTAGAGGGGACATCTAGTAGTGTTGTTAGCAATTCAACTTTGTTGGTGTCTTCATCAACTATAGATGATAACGATGGTGATGGTGTGCCTTTTCATGTCATTAAA
GATATTCGGTTGGATTGTGTATTTAATGTAAAAGATACATTTGCTAGCAAAGAAGTGTTGTGTAACAAATCATTTTTGGTTAATTTGGATACTCGGTCATGTACATGCCG
TGTTTGGGATCTTGATGAAATTCCATGCTCTCATGCGCTTCTTTGCTATACGTGCACTAGATTTGAATCCTTATACTTTTGTGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATAAGATTCTTATTGTTGTCTTCCATGGTGGGCAATGGAATGCTAATGGTTCTTATGAGAAGTATAAGATTAGTGGAGTTTTGGTGGATGAACTAATGAGTTTTGA
AACTTTTATACCCCCTTTTGAAATTTTGGAAGATAAAGGCGTGGACTGGTTCTTAACATTAGTTAAGAATAATGGTACAAGACATCCATTAGTGGTTGATGCTAAGAACT
TTTATTTAGAGGGGACATCTAGTAGTGTTGTTAGCAATTCAACTTTGTTGGTGTCTTCATCAACTATAGATGATAACGATGGTGATGGTGTGCCTTTTCATGTCATTAAA
GATATTCGGTTGGATTGTGTATTTAATGTAAAAGATACATTTGCTAGCAAAGAAGTGTTGTGTAACAAATCATTTTTGGTTAATTTGGATACTCGGTCATGTACATGCCG
TGTTTGGGATCTTGATGAAATTCCATGCTCTCATGCGCTTCTTTGCTATACGTGCACTAGATTTGAATCCTTATACTTTTGTGTCTAA
Protein sequenceShow/hide protein sequence
MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFIPPFEILEDKGVDWFLTLVKNNGTRHPLVVDAKNFYLEGTSSSVVSNSTLLVSSSTIDDNDGDGVPFHVIK
DIRLDCVFNVKDTFASKEVLCNKSFLVNLDTRSCTCRVWDLDEIPCSHALLCYTCTRFESLYFCV