CuGenDBv2

Gene ID	Sed0024550
Organism	Sechium edule (Chayote v1)
Description	DDE Tnp4 domain-containing protein
Genome location	LG01:12975447..12979383
RNA-Seq Expression	Sed0024550
Synteny	Sed0024550
Gene Ontology terms	GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR040344 - Uncharacterized protein At3g17950-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6584313.1 hypothetical protein SDJN03_20245, partial [Cucurbita argyrosperma subsp. sororia]

5.4e-86

89.01

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Query:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQRAAAAGGVGGGASRKSKKPKRKTTTAPPLAADRKRRW
        MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQ AAA    GGG SRKSKKPKRKTT AP L ADRKRRW
Subjt:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQRAAAAGGVGGGASRKSKKPKRKTTTAPPLAADRKRRW

Query:  WRLCRDDGVKPASLGDFLEVERRFGDGSFYGNAVDLDGVVAADQQRNGRNLFADGRVLPPAQTEEEAAAAAAGALCRFSVSLTGICSGGAG
        WRLCRDDGVKPASLG+FLEVERRFGDG+F+GNAVDL+GVV+ADQQRNGR+LFADGRVLPPAQT+E+   +AAGALCRFSVSLTGICSGGAG
Subjt:  WRLCRDDGVKPASLGDFLEVERRFGDGSFYGNAVDLDGVVAADQQRNGRNLFADGRVLPPAQTEEEAAAAAAGALCRFSVSLTGICSGGAG

XP_016899568.1 PREDICTED: uncharacterized protein At3g17950 isoform X2 [Cucumis melo]

7.8e-85

89.01

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Query:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQRAAAAGGVGGGASRKSKKPKRKTTTAPPLAADRKRRW
        MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQ  AA    GGG SRKSKK KRKTTTAP L ADRKRRW
Subjt:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQRAAAAGGVGGGASRKSKKPKRKTTTAPPLAADRKRRW

Query:  WRLCRDDGVKPASLGDFLEVERRFGDGSFYGNAVDLDGVVAADQQRNGRNLFADGRVLPPAQTEEEAAAAAAGALCRFSVSLTGICSGGAG
        WRLCRDDGVKPASLG+FLEVERRFGDG+FYGNAVDL+GVV ADQQRNGR+LFADGRVLPPAQTEE+   +A GALCRFSVSLTGICSGGAG
Subjt:  WRLCRDDGVKPASLGDFLEVERRFGDGSFYGNAVDLDGVVAADQQRNGRNLFADGRVLPPAQTEEEAAAAAAGALCRFSVSLTGICSGGAG

XP_022924210.1 uncharacterized protein At3g17950 [Cucurbita moschata]

2.4e-86

89.53

Show/hide

Query:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQRAAAAGGVGGGASRKSKKPKRKTTTAPPLAADRKRRW
        MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQ AAA    GGG SRKSKKPKRKTT AP L ADRKRRW
Subjt:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQRAAAAGGVGGGASRKSKKPKRKTTTAPPLAADRKRRW

Query:  WRLCRDDGVKPASLGDFLEVERRFGDGSFYGNAVDLDGVVAADQQRNGRNLFADGRVLPPAQTEEEAAAAAAGALCRFSVSLTGICSGGAG
        WRLCRDDGVKPASLG+FLEVERRFGDG+F+GNAVDL+GVV+ADQQRNGR+LFADGRVLPPAQTEE+   +AAGALCRFSVSLTGICSGGAG
Subjt:  WRLCRDDGVKPASLGDFLEVERRFGDGSFYGNAVDLDGVVAADQQRNGRNLFADGRVLPPAQTEEEAAAAAAGALCRFSVSLTGICSGGAG

XP_023520118.1 uncharacterized protein At3g17950-like [Cucurbita pepo subsp. pepo]

5.4e-86

89.01

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Query:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQRAAAAGGVGGGASRKSKKPKRKTTTAPPLAADRKRRW
        MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQ +AA    GGG SRKSKKPKRKTT AP L ADRKRRW
Subjt:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQRAAAAGGVGGGASRKSKKPKRKTTTAPPLAADRKRRW

Query:  WRLCRDDGVKPASLGDFLEVERRFGDGSFYGNAVDLDGVVAADQQRNGRNLFADGRVLPPAQTEEEAAAAAAGALCRFSVSLTGICSGGAG
        WRLCRDDGVKPASLG+FLEVERRFGDG+F+GNAVDL+GVV+ADQQRNGR+LFADGRVLPPAQTEE+   +AAGALCRFSVSLTGICSGGAG
Subjt:  WRLCRDDGVKPASLGDFLEVERRFGDGSFYGNAVDLDGVVAADQQRNGRNLFADGRVLPPAQTEEEAAAAAAGALCRFSVSLTGICSGGAG

XP_031739825.1 uncharacterized protein At3g17950 [Cucumis sativus]

3.5e-85

71.59

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Query:  RTKLRIIER-----------NIHQKAALTIIS--NLSFLCFSLLHFHIPNSQSFLSPLLLCFFS---FFLQIS-------MLNPANDLLPPPSSPTNSSI
        RTKLRII+R           N H K+     +  +LSF  FSL      +S S  S     F S   F L  S       MLNPANDLLPPPSSPTNSSI
Subjt:  RTKLRIIER-----------NIHQKAALTIIS--NLSFLCFSLLHFHIPNSQSFLSPLLLCFFS---FFLQIS-------MLNPANDLLPPPSSPTNSSI

Query:  SSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQRAAAAGGVGGGASRKSKKPKRKTTTAPPLAADRKRRWWRLCRDDGVKPASLGDFLEV
        SSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQ  AA    GGG SRKSKK KRKTT AP L ADRKRRWWRLCRDDGVKPASLG+FLEV
Subjt:  SSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQRAAAAGGVGGGASRKSKKPKRKTTTAPPLAADRKRRWWRLCRDDGVKPASLGDFLEV

Query:  ERRFGDGSFYGNAVDLDGVVAADQQRNGRNLFADGRVLPPAQTEEEAAAAAAGALCRFSVSLTGICSGGAG
        ERRFGDG+FYGNAVDL+GVVAADQQRNGR+LFADGRVLPPAQTEE+ + AA   LCRFSVSLTGICSGGAG
Subjt:  ERRFGDGSFYGNAVDLDGVVAADQQRNGRNLFADGRVLPPAQTEEEAAAAAAGALCRFSVSLTGICSGGAG

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CPP8 uncharacterized protein At3g17950 isoform X1

3.8e-85

89.01

Show/hide

Query:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQRAAAAGGVGGGASRKSKKPKRKTTTAPPLAADRKRRW
        MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQ  AA    GGG SRKSKK KRKTTTAP L ADRKRRW
Subjt:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQRAAAAGGVGGGASRKSKKPKRKTTTAPPLAADRKRRW

Query:  WRLCRDDGVKPASLGDFLEVERRFGDGSFYGNAVDLDGVVAADQQRNGRNLFADGRVLPPAQTEEEAAAAAAGALCRFSVSLTGICSGGAG
        WRLCRDDGVKPASLG+FLEVERRFGDG+FYGNAVDL+GVV ADQQRNGR+LFADGRVLPPAQTEE+   +A GALCRFSVSLTGICSGGAG
Subjt:  WRLCRDDGVKPASLGDFLEVERRFGDGSFYGNAVDLDGVVAADQQRNGRNLFADGRVLPPAQTEEEAAAAAAGALCRFSVSLTGICSGGAG

A0A1S4DUB1 uncharacterized protein At3g17950 isoform X2

3.8e-85

89.01

Show/hide

Query:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQRAAAAGGVGGGASRKSKKPKRKTTTAPPLAADRKRRW
        MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQ  AA    GGG SRKSKK KRKTTTAP L ADRKRRW
Subjt:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQRAAAAGGVGGGASRKSKKPKRKTTTAPPLAADRKRRW

Query:  WRLCRDDGVKPASLGDFLEVERRFGDGSFYGNAVDLDGVVAADQQRNGRNLFADGRVLPPAQTEEEAAAAAAGALCRFSVSLTGICSGGAG
        WRLCRDDGVKPASLG+FLEVERRFGDG+FYGNAVDL+GVV ADQQRNGR+LFADGRVLPPAQTEE+   +A GALCRFSVSLTGICSGGAG
Subjt:  WRLCRDDGVKPASLGDFLEVERRFGDGSFYGNAVDLDGVVAADQQRNGRNLFADGRVLPPAQTEEEAAAAAAGALCRFSVSLTGICSGGAG

A0A5D3BLI7 Putative nuclease HARBI1

3.8e-85

89.01

Show/hide

Query:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQRAAAAGGVGGGASRKSKKPKRKTTTAPPLAADRKRRW
        MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQ  AA    GGG SRKSKK KRKTTTAP L ADRKRRW
Subjt:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQRAAAAGGVGGGASRKSKKPKRKTTTAPPLAADRKRRW

Query:  WRLCRDDGVKPASLGDFLEVERRFGDGSFYGNAVDLDGVVAADQQRNGRNLFADGRVLPPAQTEEEAAAAAAGALCRFSVSLTGICSGGAG
        WRLCRDDGVKPASLG+FLEVERRFGDG+FYGNAVDL+GVV ADQQRNGR+LFADGRVLPPAQTEE+   +A GALCRFSVSLTGICSGGAG
Subjt:  WRLCRDDGVKPASLGDFLEVERRFGDGSFYGNAVDLDGVVAADQQRNGRNLFADGRVLPPAQTEEEAAAAAAGALCRFSVSLTGICSGGAG

A0A6J1E8Y2 uncharacterized protein At3g17950

1.2e-86

89.53

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Query:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQRAAAAGGVGGGASRKSKKPKRKTTTAPPLAADRKRRW
        MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQ AAA    GGG SRKSKKPKRKTT AP L ADRKRRW
Subjt:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQRAAAAGGVGGGASRKSKKPKRKTTTAPPLAADRKRRW

Query:  WRLCRDDGVKPASLGDFLEVERRFGDGSFYGNAVDLDGVVAADQQRNGRNLFADGRVLPPAQTEEEAAAAAAGALCRFSVSLTGICSGGAG
        WRLCRDDGVKPASLG+FLEVERRFGDG+F+GNAVDL+GVV+ADQQRNGR+LFADGRVLPPAQTEE+   +AAGALCRFSVSLTGICSGGAG
Subjt:  WRLCRDDGVKPASLGDFLEVERRFGDGSFYGNAVDLDGVVAADQQRNGRNLFADGRVLPPAQTEEEAAAAAAGALCRFSVSLTGICSGGAG

A0A6J1KNQ0 uncharacterized protein At3g17950-like

5.0e-85

88.48

Show/hide

Query:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQRAAAAGGVGGGASRKSKKPKRKTTTAPPLAADRKRRW
        MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQ  AA    GGG SRKSKKPKRKTT AP L ADRKRRW
Subjt:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQRAAAAGGVGGGASRKSKKPKRKTTTAPPLAADRKRRW

Query:  WRLCRDDGVKPASLGDFLEVERRFGDGSFYGNAVDLDGVVAADQQRNGRNLFADGRVLPPAQTEEEAAAAAAGALCRFSVSLTGICSGGAG
        WRLCRDDGVKPASLG+FLEVERRFGDG+F+ NAVDL+GVV+ADQQRNGR LFADGRVLPPAQTEE+   +AAGALCRFSVSLTGICSGGAG
Subjt:  WRLCRDDGVKPASLGDFLEVERRFGDGSFYGNAVDLDGVVAADQQRNGRNLFADGRVLPPAQTEEEAAAAAAGALCRFSVSLTGICSGGAG

SwissProt top hits

e value

%identity

Alignment

Q6DR24 Uncharacterized protein At3g17950

2.0e-35

49.27

Show/hide

Query:  PSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPA---ITFRVPSQNRDQRAAAAGGVGGGASRKSKKPKRKTTTAPPLAADRKRRWWRLCRDD-
        PSSPT SS+SSSDLDTESTGSFFHDRS +LGTLMG SF A   + FR  S+     + A        +R++ + KR  + +      R+R+WWR CRDD 
Subjt:  PSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPA---ITFRVPSQNRDQRAAAAGGVGGGASRKSKKPKRKTTTAPPLAADRKRRWWRLCRDD-

Query:  ------GV-------KPASLGDFLEVERRFGDGSFYGNA-VDLDGVVAA---DQQ--RNGRNLFADGRVLPPAQTE--EEAAAAAAGALCRFSVSLTGIC
              G+       K +SLG++LEVERRFGD + Y +A  +L+  V A   DQQ     R LFADGRVLPPA  E         A +LCRF VSLTGIC
Subjt:  ------GV-------KPASLGDFLEVERRFGDGSFYGNA-VDLDGVVAA---DQQ--RNGRNLFADGRVLPPAQTE--EEAAAAAAGALCRFSVSLTGIC

Query:  SGGAG
        SGG G
Subjt:  SGGAG

Arabidopsis top hits

e value

%identity

Alignment

AT3G17950.1 unknown protein

1.4e-36

49.27

Show/hide

Query:  PSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPA---ITFRVPSQNRDQRAAAAGGVGGGASRKSKKPKRKTTTAPPLAADRKRRWWRLCRDD-
        PSSPT SS+SSSDLDTESTGSFFHDRS +LGTLMG SF A   + FR  S+     + A        +R++ + KR  + +      R+R+WWR CRDD 
Subjt:  PSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPA---ITFRVPSQNRDQRAAAAGGVGGGASRKSKKPKRKTTTAPPLAADRKRRWWRLCRDD-

Query:  ------GV-------KPASLGDFLEVERRFGDGSFYGNA-VDLDGVVAA---DQQ--RNGRNLFADGRVLPPAQTE--EEAAAAAAGALCRFSVSLTGIC
              G+       K +SLG++LEVERRFGD + Y +A  +L+  V A   DQQ     R LFADGRVLPPA  E         A +LCRF VSLTGIC
Subjt:  ------GV-------KPASLGDFLEVERRFGDGSFYGNA-VDLDGVVAA---DQQ--RNGRNLFADGRVLPPAQTE--EEAAAAAAGALCRFSVSLTGIC

Query:  SGGAG
        SGG G
Subjt:  SGGAG

AT3G17950.2 unknown protein

5.0e-21

41.86

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Query:  MGVSFPA---ITFRVPSQNRDQRAAAAGGVGGGASRKSKKPKRKTTTAPPLAADRKRRWWRLCRDD-------GV-------KPASLGDFLEVERRFGDG
        MG SF A   + FR  S+     + A        +R++ + KR  + +      R+R+WWR CRDD       G+       K +SLG++LEVERRFGD 
Subjt:  MGVSFPA---ITFRVPSQNRDQRAAAAGGVGGGASRKSKKPKRKTTTAPPLAADRKRRWWRLCRDD-------GV-------KPASLGDFLEVERRFGDG

Query:  SFYGNA-VDLDGVVAA---DQQ--RNGRNLFADGRVLPPAQTE--EEAAAAAAGALCRFSVSLTGICSGGAG
        + Y +A  +L+  V A   DQQ     R LFADGRVLPPA  E         A +LCRF VSLTGICSGG G
Subjt:  SFYGNA-VDLDGVVAA---DQQ--RNGRNLFADGRVLPPAQTE--EEAAAAAAGALCRFSVSLTGICSGGAG

AT5G02440.1 unknown protein

2.9e-05

52.73

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Query:  SPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGV-SFPAITFRVPSQNRDQRAAA
        SP+ SS SSSDLD++S GSFF DRS +LG L+G+ SF  ++ R      DQ  AA
Subjt:  SPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGV-SFPAITFRVPSQNRDQRAAA

Sequences

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CDS sequence

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ATGGAGGTACAACCGCTGACGGCACACATCGCGACTCGAACTGCGGGCATTGCTTTTGAGATGAATGAAAAAAGTGATTTTTCGAAAACATTGAAAAGTTGGAGGACAAA
ATTGAGAATAATAGAAAGAAACATCCACCAAAAGGCTGCATTAACAATCATTTCAAATTTAAGCTTCCTCTGTTTCTCTCTCCTCCATTTCCACATCCCAAATTCCCAAT
CCTTTCTCTCTCCTCTTCTTCTTTGTTTTTTTTCATTCTTCCTTCAAATTTCAATGCTGAATCCGGCCAACGATCTGTTACCGCCGCCGTCTTCTCCGACCAATTCCTCC
ATCTCCTCCTCCGATCTCGACACCGAGTCTACAGGTTCGTTCTTCCATGACCGGAGCACGAGCTTGGGGACATTAATGGGGGTGAGTTTCCCGGCGATTACCTTCCGAGT
TCCTTCCCAGAACCGAGACCAACGCGCCGCCGCGGCTGGCGGCGTCGGCGGCGGCGCCTCCCGCAAGAGTAAGAAGCCGAAGAGAAAAACGACGACGGCGCCACCACTGG
CTGCGGATCGGAAGCGGAGGTGGTGGCGGCTGTGCAGAGACGACGGCGTTAAGCCGGCGTCGCTGGGCGATTTCCTTGAGGTGGAACGGAGATTTGGGGACGGGTCTTTT
TACGGCAATGCGGTGGATCTGGACGGTGTGGTTGCGGCGGATCAACAGAGGAATGGCCGGAATTTATTCGCCGACGGGAGAGTTCTTCCGCCGGCGCAAACGGAGGAAGA
AGCGGCGGCCGCTGCGGCTGGTGCTCTTTGCCGATTTTCCGTATCGCTCACCGGAATTTGCAGCGGCGGTGCCGGCTAA

mRNA sequence

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Protein sequence

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MEVQPLTAHIATRTAGIAFEMNEKSDFSKTLKSWRTKLRIIERNIHQKAALTIISNLSFLCFSLLHFHIPNSQSFLSPLLLCFFSFFLQISMLNPANDLLPPPSSPTNSS
ISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQRAAAAGGVGGGASRKSKKPKRKTTTAPPLAADRKRRWWRLCRDDGVKPASLGDFLEVERRFGDGSF
YGNAVDLDGVVAADQQRNGRNLFADGRVLPPAQTEEEAAAAAAGALCRFSVSLTGICSGGAG

Sed0024550 (gene) of Chayote v1 genome