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Sed0024574 (gene) of Chayote v1 genome

Gene IDSed0024574
OrganismSechium edule (Chayote v1)
DescriptionSmall VCP/p97-interacting protein
Genome locationLG11:22570467..22572213
RNA-Seq ExpressionSed0024574
SyntenySed0024574
Gene Ontology termsNA
InterPro domainsIPR031632 - Small VCP/p97-interacting protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020610.1 hypothetical protein SDJN02_17296 [Cucurbita argyrosperma subsp. argyrosperma]7.2e-2587.01Show/hide
Query:  MGQCVSCVGEGEKQQRKEEQRLASMEARAKAAEAAHRRQEDFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
        MGQCVSC+ E +KQQRKEE+RLAS+EAR+KAAEAA RRQE+FEKSAAGRAARAQMAANAKQSAN NKGEPVLKWSMG
Subjt:  MGQCVSCVGEGEKQQRKEEQRLASMEARAKAAEAAHRRQEDFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
XP_008444542.1 PREDICTED: uncharacterized protein LOC103487833 [Cucumis melo]2.9e-2689.61Show/hide
Query:  MGQCVSCVGEGEKQQRKEEQRLASMEARAKAAEAAHRRQEDFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
        MGQCVSC+ EG+KQQRKEE+RLAS+EARAKAAEAA RRQE+FEKSAAGRAARAQ+AANAKQSANTNKGEPVLKWSMG
Subjt:  MGQCVSCVGEGEKQQRKEEQRLASMEARAKAAEAAHRRQEDFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
XP_022131511.1 uncharacterized protein LOC111004688 [Momordica charantia]1.2e-2484.42Show/hide
Query:  MGQCVSCVGEGEKQQRKEEQRLASMEARAKAAEAAHRRQEDFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
        MGQC+ C+ EG+KQQR+EE+RL+S+EARAKAAEAA RRQE+FEKSAAGRAARAQMAANAKQSANTN+GEPVLKWSMG
Subjt:  MGQCVSCVGEGEKQQRKEEQRLASMEARAKAAEAAHRRQEDFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
XP_022951067.1 uncharacterized protein LOC111454028 [Cucurbita moschata]7.2e-2587.01Show/hide
Query:  MGQCVSCVGEGEKQQRKEEQRLASMEARAKAAEAAHRRQEDFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
        MGQCVSC+ E +KQQRKEE+RLAS+EAR+KAAEAA RRQE+FEKSAAGRAARAQMAANAKQSAN NKGEPVLKWSMG
Subjt:  MGQCVSCVGEGEKQQRKEEQRLASMEARAKAAEAAHRRQEDFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
XP_038886006.1 uncharacterized protein LOC120076314 [Benincasa hispida]1.3e-2690.91Show/hide
Query:  MGQCVSCVGEGEKQQRKEEQRLASMEARAKAAEAAHRRQEDFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
        MGQCVSC+ EGEKQQRKEE+RLAS+EARAKAAEAA RRQE+FEKSAAGRAARAQ+AANAKQSANTNKGEPVLKWSMG
Subjt:  MGQCVSCVGEGEKQQRKEEQRLASMEARAKAAEAAHRRQEDFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
TrEMBL top hitse value%identityAlignment
A0A1S3BAJ0 uncharacterized protein LOC1034878331.4e-2689.61Show/hide
Query:  MGQCVSCVGEGEKQQRKEEQRLASMEARAKAAEAAHRRQEDFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
        MGQCVSC+ EG+KQQRKEE+RLAS+EARAKAAEAA RRQE+FEKSAAGRAARAQ+AANAKQSANTNKGEPVLKWSMG
Subjt:  MGQCVSCVGEGEKQQRKEEQRLASMEARAKAAEAAHRRQEDFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
A0A6J1BPP8 uncharacterized protein LOC1110046886.0e-2584.42Show/hide
Query:  MGQCVSCVGEGEKQQRKEEQRLASMEARAKAAEAAHRRQEDFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
        MGQC+ C+ EG+KQQR+EE+RL+S+EARAKAAEAA RRQE+FEKSAAGRAARAQMAANAKQSANTN+GEPVLKWSMG
Subjt:  MGQCVSCVGEGEKQQRKEEQRLASMEARAKAAEAAHRRQEDFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
A0A6J1GGM5 uncharacterized protein LOC1114540283.5e-2587.01Show/hide
Query:  MGQCVSCVGEGEKQQRKEEQRLASMEARAKAAEAAHRRQEDFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
        MGQCVSC+ E +KQQRKEE+RLAS+EAR+KAAEAA RRQE+FEKSAAGRAARAQMAANAKQSAN NKGEPVLKWSMG
Subjt:  MGQCVSCVGEGEKQQRKEEQRLASMEARAKAAEAAHRRQEDFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
A0A6J1K846 uncharacterized protein LOC1114920136.0e-2584.42Show/hide
Query:  MGQCVSCVGEGEKQQRKEEQRLASMEARAKAAEAAHRRQEDFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
        MGQC SC+ EG++Q+RKEE+RLAS+EARAKAAEAA +RQE+FEKSAAGRAARAQ+AANAKQSANTNKGEPVLKWSMG
Subjt:  MGQCVSCVGEGEKQQRKEEQRLASMEARAKAAEAAHRRQEDFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
A0A6J1KLT2 uncharacterized protein LOC1114964243.5e-2587.01Show/hide
Query:  MGQCVSCVGEGEKQQRKEEQRLASMEARAKAAEAAHRRQEDFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
        MGQCVSC+ E +KQQRKEE+RLAS+EAR+KAAEAA RRQE+FEKSAAGRAARAQMAANAKQSAN NKGEPVLKWSMG
Subjt:  MGQCVSCVGEGEKQQRKEEQRLASMEARAKAAEAAHRRQEDFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G63905.1 unknown protein5.7e-2072.6Show/hide
Query:  CVSCVGEGEKQQRKEEQRLASMEARAKAAEAAHRRQEDFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSM
        C SC    +K+QRKEE+R AS EARAKAAEAA RR+E F+KSAAGRAA+AQ+   AKQSANTNKGEPVLKW M
Subjt:  CVSCVGEGEKQQRKEEQRLASMEARAKAAEAAHRRQEDFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCAATGCGTAAGTTGCGTGGGCGAAGGCGAAAAGCAACAGAGAAAAGAGGAACAAAGATTGGCCTCCATGGAAGCTCGCGCCAAAGCTGCTGAAGCTGCTCACAG
GAGGCAAGAAGATTTTGAAAAATCTGCTGCAGGAAGAGCGGCACGCGCTCAGATGGCAGCAAATGCAAAGCAATCTGCTAACACTAACAAGGGAGAACCAGTTCTTAAGT
GGAGTATGGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCAATGCGTAAGTTGCGTGGGCGAAGGCGAAAAGCAACAGAGAAAAGAGGAACAAAGATTGGCCTCCATGGAAGCTCGCGCCAAAGCTGCTGAAGCTGCTCACAG
GAGGCAAGAAGATTTTGAAAAATCTGCTGCAGGAAGAGCGGCACGCGCTCAGATGGCAGCAAATGCAAAGCAATCTGCTAACACTAACAAGGGAGAACCAGTTCTTAAGT
GGAGTATGGGCTGA
Protein sequenceShow/hide protein sequence
MGQCVSCVGEGEKQQRKEEQRLASMEARAKAAEAAHRRQEDFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG