; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0024600 (gene) of Chayote v1 genome

Gene IDSed0024600
OrganismSechium edule (Chayote v1)
Descriptionflowering time control protein FCA
Genome locationLG06:35624295..35641704
RNA-Seq ExpressionSed0024600
SyntenySed0024600
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR001202 - WW domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR036020 - WW domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038123.1 flowering time control protein FCA [Cucumis melo var. makuwa]7.3e-21277.71Show/hide
Query:  EAFGNGGLRPNSGNQNANLGRKRPRDHSNRTVPADHGE-GGTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRA
        E FGNGGLRPN GN NANLGRKRPR++SNRTVP DH E  G VKLYVAQVPRTGTEEA+RPLF+VHGD+VEIVILRDK+TGQQQGSCFVKY++S+EADRA
Subjt:  EAFGNGGLRPNSGNQNANLGRKRPRDHSNRTVPADHGE-GGTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRA

Query:  IRALDNQYTFPGELTPINVKYADGEKDRIGGLERLFVGSLNKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMR
        IRALDNQYTFPGELTPINVKYAD EKDR+G LE+L+VGSLNKN TKREIEEVFSPYGFVEDIY++RD+LKQSRG AFVKYARR +A AAIKAL+GNFTMR
Subjt:  IRALDNQYTFPGELTPINVKYADGEKDRIGGLERLFVGSLNKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMR

Query:  GCDQPLIVRLADSKRPWIGEQR-NNMSGSPRFG-HPQSFRPEPPLGPPGGGCFPNNSFHGQQNSASLGPPKNASQVASHAPFPPNTTQKPPPRMQESSSS
        GCDQPLIVRLAD K+P IGEQR +N+SGSPRFG HPQ FRPEPP+G P GGCFPNNS+ GQQNS SLGPP+NASQ ASH PF PN+ QKP P++QE  SS
Subjt:  GCDQPLIVRLADSKRPWIGEQR-NNMSGSPRFG-HPQSFRPEPPLGPPGGGCFPNNSFHGQQNSASLGPPKNASQVASHAPFPPNTTQKPPPRMQESSSS

Query:  FSQMSLQPMKTTQQVCQPPATQMDFSKMQNQVHYQQPRQDSHQQHNLQVHENSYECDRNYKILIGAAPTACGVQTFSGTPNSPMAHPNSRVESPLECDWS
        F+QMS QPM++TQQVCQPP  Q DFSKMQNQV  QQPRQDSHQQ NLQ                   P   GVQTFS T +SPM  P+SRVE  LECDWS
Subjt:  FSQMSLQPMKTTQQVCQPPATQMDFSKMQNQVHYQQPRQDSHQQHNLQVHENSYECDRNYKILIGAAPTACGVQTFSGTPNSPMAHPNSRVESPLECDWS

Query:  EHTCPDGFKYYYNCVTCESLWEKPEEFALFE-QLKQEKLQKSNHQLHSSLAGLSSPEVPPQSNVFHKKLDLQSSSAVRELDCMRLQSQASPVVGPACV
        EHTCPDGFKYYYNCVT ESLWEKPEEFALFE QLKQEKLQK NHQ+HSSL G+SS EVPPQ N+F +KLD Q SSAVRELDCMRLQS+ASPVV PACV
Subjt:  EHTCPDGFKYYYNCVTCESLWEKPEEFALFE-QLKQEKLQKSNHQLHSSLAGLSSPEVPPQSNVFHKKLDLQSSSAVRELDCMRLQSQASPVVGPACV

KAG7036630.1 Flowering time control protein FCA, partial [Cucurbita argyrosperma subsp. argyrosperma]8.7e-22173.3Show/hide
Query:  RPSFNPQYPPPPP------------HQQPYQPHQNNWNH-----------PPPHFNGDTNEAFGNGGLRPNSGNQNANLGRKRPRDHSNRTVPADHGE-G
        +P F  Q+ PPPP            HQQPYQ  +NNWNH           PPP FNG T+E FGNGG+RPN GNQNANLGRKRPR+   RTVPADH E G
Subjt:  RPSFNPQYPPPPP------------HQQPYQPHQNNWNH-----------PPPHFNGDTNEAFGNGGLRPNSGNQNANLGRKRPRDHSNRTVPADHGE-G

Query:  GTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGELTPINVKYADGEKDRIGGLERLFVGSL
        GT KLYVAQVPRTGTEEA+RPLF+VHG+++EIVILRDK+TGQQQGSCFVKYATSIEADRAIRALDNQYTFPGE+TPINVKYADGEK+R+G LE+L+VGSL
Subjt:  GTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGELTPINVKYADGEKDRIGGLERLFVGSL

Query:  NKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMRGCDQPLIVRLADSKRPWIGEQRNNMSGSPRFG-HPQSFRP
        NKN TKREIEEVFSPYGFVEDIY+MRDELKQSRGCAFVKYARR +A AAI+AL+G +TMRGCDQPLIVRLA+ K+P IGEQR+NMSGSP+FG HP  FRP
Subjt:  NKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMRGCDQPLIVRLADSKRPWIGEQRNNMSGSPRFG-HPQSFRP

Query:  EPPLGPPGGGCFPNNSFHGQQNSASLGPPKNASQVASHAPFPPNTTQKPPPRMQESSSSFSQMSLQPMKTTQQVCQPPATQMDFSKMQNQVHYQQPRQDS
        E PLGPP GGCFPNN + GQQNSASLGPPK+ASQV SHAPFPPN+ QKPPP++QE SSSF+QM  +PM+ T QVCQPP TQ DFSKM NQVH QQPRQDS
Subjt:  EPPLGPPGGGCFPNNSFHGQQNSASLGPPKNASQVASHAPFPPNTTQKPPPRMQESSSSFSQMSLQPMKTTQQVCQPPATQMDFSKMQNQVHYQQPRQDS

Query:  H-QQHNLQVHENSYECDRNYKILIGAAPTACGVQTFSGTPNSPMAHPNSRVESPLECDWSEHTCPDGFKYYYNCVTCESLWEKPEEFALFE-QLKQEKLQ
        H QQ NLQ                   P A GVQTF+GTPNSPM HP+S+VE PLECDWSEHTCPDGFKYYYNCVTCESLWEKPEEFA FE Q KQEKLQ
Subjt:  H-QQHNLQVHENSYECDRNYKILIGAAPTACGVQTFSGTPNSPMAHPNSRVESPLECDWSEHTCPDGFKYYYNCVTCESLWEKPEEFALFE-QLKQEKLQ

Query:  KSNHQLHSSLAGLSSPEVPPQSNVFHKKLDLQSSSAVRELDCMRLQSQASPVVGPACV
        K NH      AGLSSPE  PQ N+F  K ++Q+S+AVRELDCMRLQS+ASPVV PACV
Subjt:  KSNHQLHSSLAGLSSPEVPPQSNVFHKKLDLQSSSAVRELDCMRLQSQASPVVGPACV

XP_008447475.2 PREDICTED: flowering time control protein FCA [Cucumis melo]1.1e-22074.01Show/hide
Query:  RPSFNPQYPPPPP--------HQQPYQPHQNNWNH-----------PPPHFNGDTNEAFGNGGLRPNSGNQNANLGRKRPRDHSNRTVPADHGE-GGTVK
        +P F PQ PPPPP        H   +Q  QNNWNH           P PHFNG+  E FGNGGLRPN GN NANLGRKRPR++SNRTVP DH E  G VK
Subjt:  RPSFNPQYPPPPP--------HQQPYQPHQNNWNH-----------PPPHFNGDTNEAFGNGGLRPNSGNQNANLGRKRPRDHSNRTVPADHGE-GGTVK

Query:  LYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGELTPINVKYADGEKDRIGGLERLFVGSLNKNA
        LYVAQVPRTGTEEA+RPLF+VHGD+VEIVILRDK+TGQQQGSCFVKY++S+EADRAIRALDNQYTFPGELTPINVKYAD EKDR+G LE+L+VGSLNKN 
Subjt:  LYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGELTPINVKYADGEKDRIGGLERLFVGSLNKNA

Query:  TKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMRGCDQPLIVRLADSKRPWIGEQR-NNMSGSPRFG-HPQSFRPEPP
        TKREIEEVFSPYGFVEDIY++RD+LKQSRG AFVKYARR +A AAIKAL+GNFTMRGCDQPLIVRLAD K+P IGEQR +N+SGSPRFG HPQ FRPEPP
Subjt:  TKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMRGCDQPLIVRLADSKRPWIGEQR-NNMSGSPRFG-HPQSFRPEPP

Query:  LGPPGGGCFPNNSFHGQQNSASLGPPKNASQVASHAPFPPNTTQKPPPRMQESSSSFSQMSLQPMKTTQQVCQPPATQMDFSKMQNQVHYQQPRQDSHQQ
        +G P GGCFPNNS+ GQQNS SLGPP+NASQ ASH PF PN+ QKP P++QE  SSF+QMS QPM++TQQVCQPP  Q DFSKMQNQV  QQPRQDSHQQ
Subjt:  LGPPGGGCFPNNSFHGQQNSASLGPPKNASQVASHAPFPPNTTQKPPPRMQESSSSFSQMSLQPMKTTQQVCQPPATQMDFSKMQNQVHYQQPRQDSHQQ

Query:  HNLQVHENSYECDRNYKILIGAAPTACGVQTFSGTPNSPMAHPNSRVESPLECDWSEHTCPDGFKYYYNCVTCESLWEKPEEFALFE-QLKQEKLQKSNH
         NLQ                   P   GVQTFS T +SPM  P+SRVE  LECDWSEHTCPDGFKYYYNCVT ESLWEKPEEFALFE QLKQEKLQK NH
Subjt:  HNLQVHENSYECDRNYKILIGAAPTACGVQTFSGTPNSPMAHPNSRVESPLECDWSEHTCPDGFKYYYNCVTCESLWEKPEEFALFE-QLKQEKLQKSNH

Query:  QLHSSLAGLSSPEVPPQSNVFHKKLDLQSSSAVRELDCMRLQSQASPVVGPACV
        Q+HSSL G+SS EVPPQ N+F +KLD Q SSAVRELDCMRLQS+ASPVV PACV
Subjt:  QLHSSLAGLSSPEVPPQSNVFHKKLDLQSSSAVRELDCMRLQSQASPVVGPACV

XP_022157018.1 CUGBP Elav-like family member 4 [Momordica charantia]2.8e-21972.54Show/hide
Query:  RPSFNPQY----PPPPPHQQP------------------YQPHQNNWNHP-----------PPHFNGDTNEAFGNGGLRPNSGNQNANLGRKRPRDHSNR
        +P++ PQY    PPPPPHQ P                  +QP QNNWN P            PHFNG+ NE FGNGGLRPN GNQNANLGRKRPR++SNR
Subjt:  RPSFNPQY----PPPPPHQQP------------------YQPHQNNWNHP-----------PPHFNGDTNEAFGNGGLRPNSGNQNANLGRKRPRDHSNR

Query:  TVPADHGEGGTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGELTPINVKYADGEKDRIGG
        TVP+DH E   VKLYVAQVPRTGTEEA+RPLF+VHGD+VEIVILRDK+TGQQQGSCFVKYATSIEADRAI ALDNQ+TFPGE+ PINVKYADGE++R+G 
Subjt:  TVPADHGEGGTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGELTPINVKYADGEKDRIGG

Query:  LERLFVGSLNKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMRGCDQPLIVRLADSKRPWIGEQR-NNMSGSPR
        LE+L+VGSLNKN TKREIEEVFSPYGFVEDIY+MRDELKQSRGCAFVKYARR +A AAIKAL+GN+T+RGCDQPLIVRLAD K+  +GEQR N+MSGSP 
Subjt:  LERLFVGSLNKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMRGCDQPLIVRLADSKRPWIGEQR-NNMSGSPR

Query:  FG-HPQSFRPEPPLGPPGGGCFPNNSFHGQQNSASLGPPKNASQVASHAPFPPNTTQKPPPRMQESSSSFSQMSLQPMKTTQQVCQPPATQMDFSKMQNQ
        FG HPQ FRPEPPLG P GGCFPNN +  QQNSASLGP KNASQVAS+AP  PNT QK  P +QE SSSF+ +  QPM+TTQQVCQPP TQ DFSKMQNQ
Subjt:  FG-HPQSFRPEPPLGPPGGGCFPNNSFHGQQNSASLGPPKNASQVASHAPFPPNTTQKPPPRMQESSSSFSQMSLQPMKTTQQVCQPPATQMDFSKMQNQ

Query:  VH-YQQPRQDSHQQHNLQVHENSYECDRNYKILIGAAPTACGVQTFSGTPNSPMAHPNSRVESPLECDWSEHTCPDGFKYYYNCVTCESLWEKPEEFALF
        V+  QQPR+DS+QQ N QV+EN+              PTA G+QTFSG PNSP+  P SRVE  LECDWSEHTCPDGFKYYYNCVTCES WEKPEEFALF
Subjt:  VH-YQQPRQDSHQQHNLQVHENSYECDRNYKILIGAAPTACGVQTFSGTPNSPMAHPNSRVESPLECDWSEHTCPDGFKYYYNCVTCESLWEKPEEFALF

Query:  E-QLKQEKLQKSNHQLHSSLAGLSSPEVPPQSNVFHKKLDLQSSSAVRELDCMRLQSQASPVVGPACV
        E QLKQEKLQK NHQLHSSL  +SSPEV P  NVF +KL++QSSSAVRELDCMRLQS+ASPVV PACV
Subjt:  E-QLKQEKLQKSNHQLHSSLAGLSSPEVPPQSNVFHKKLDLQSSSAVRELDCMRLQSQASPVVGPACV

XP_023524604.1 CUGBP Elav-like family member 6 [Cucurbita pepo subsp. pepo]1.9e-22073.3Show/hide
Query:  RPSFNPQYPPPPP------------HQQPYQPHQNNWNH-----------PPPHFNGDTNEAFGNGGLRPNSGNQNANLGRKRPRDHSNRTVPADHGE-G
        +P F  Q+ PPPP            HQQPYQ  +NNWNH           PPP FNG  +E FGNGG+RPN GNQNANLGRKRPR+   RTVPADH E G
Subjt:  RPSFNPQYPPPPP------------HQQPYQPHQNNWNH-----------PPPHFNGDTNEAFGNGGLRPNSGNQNANLGRKRPRDHSNRTVPADHGE-G

Query:  GTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGELTPINVKYADGEKDRIGGLERLFVGSL
        GT KLYVAQVPRTGTEEA+RPLF+VHG+++EIVILRDK+TGQQQGSCFVKYATSIEADRAIRALDNQYTFPGE+TPINVKYADGEK+R+G LE+L+VGSL
Subjt:  GTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGELTPINVKYADGEKDRIGGLERLFVGSL

Query:  NKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMRGCDQPLIVRLADSKRPWIGEQRNNMSGSPRFG-HPQSFRP
        NKN TKREIEEVFSPYGFVEDIY+MRDELKQSRGCAFVKYARR +A AAI+AL+G +TMRGCDQPLIVRLA+ K+P IGEQR+NMSGSP+FG HP  FRP
Subjt:  NKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMRGCDQPLIVRLADSKRPWIGEQRNNMSGSPRFG-HPQSFRP

Query:  EPPLGPPGGGCFPNNSFHGQQNSASLGPPKNASQVASHAPFPPNTTQKPPPRMQESSSSFSQMSLQPMKTTQQVCQPPATQMDFSKMQNQVHYQQPRQDS
        E PLGPP GGCFPNNS+ GQQNSASLGPPK+ASQV SHAPF PN+ QKPPP++QE SSSF+QM  +PM+ TQQVCQPP TQ DFSKM NQVH QQPRQDS
Subjt:  EPPLGPPGGGCFPNNSFHGQQNSASLGPPKNASQVASHAPFPPNTTQKPPPRMQESSSSFSQMSLQPMKTTQQVCQPPATQMDFSKMQNQVHYQQPRQDS

Query:  H-QQHNLQVHENSYECDRNYKILIGAAPTACGVQTFSGTPNSPMAHPNSRVESPLECDWSEHTCPDGFKYYYNCVTCESLWEKPEEFALFE-QLKQEKLQ
        H QQ NLQ                   P A GVQTF+GTPNSPM HP+S+VE PLECDWSEHTCPDGFKYYYNCVTCESLWEKPEEFA FE Q KQEKLQ
Subjt:  H-QQHNLQVHENSYECDRNYKILIGAAPTACGVQTFSGTPNSPMAHPNSRVESPLECDWSEHTCPDGFKYYYNCVTCESLWEKPEEFALFE-QLKQEKLQ

Query:  KSNHQLHSSLAGLSSPEVPPQSNVFHKKLDLQSSSAVRELDCMRLQSQASPVVGPACV
        K NH      AGLSSPE  PQ N+F  K ++Q+S+AVRELDCMRLQS+ASPVV PACV
Subjt:  KSNHQLHSSLAGLSSPEVPPQSNVFHKKLDLQSSSAVRELDCMRLQSQASPVVGPACV

TrEMBL top hitse value%identityAlignment
A0A0A0LBT6 Uncharacterized protein1.5e-21077.71Show/hide
Query:  EAFGNGGLRPNSGNQNANLGRKRPRDHSNRTVPADHGE-GGTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRA
        E FGNGGLRPN GN N  LGRKRPR++SNRTVP DH E  G VKLYVAQVPRTGTEEA+RPLF+VHGD+VEIVILRDK+TGQQQGSCFVKY+TS+EADRA
Subjt:  EAFGNGGLRPNSGNQNANLGRKRPRDHSNRTVPADHGE-GGTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRA

Query:  IRALDNQYTFPGELTPINVKYADGEKDRIGGLERLFVGSLNKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMR
        IRALDNQYTFPGELTPINVKYAD EKDR+G LE+L+VG LNKN TKREIEEVFSPYGFVEDIY++RD+LKQSRG AFVKYARR +A AAIKAL+GNFTMR
Subjt:  IRALDNQYTFPGELTPINVKYADGEKDRIGGLERLFVGSLNKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMR

Query:  GCDQPLIVRLADSKRPWIGEQRN-NMSGSPRFG-HPQSFRPEPPLGPPGGGCFPNNSFHGQQNSASLGPPKNASQVASHAPFPPNTTQKPPPRMQESSSS
        GCDQPLIVRLAD K+P IGEQR+ N+SGSPRFG HPQ FRPEPP+G P GGCFPNNS+ GQQNS SLGPP+NASQVASH PF PN+ QKP P+ QE SSS
Subjt:  GCDQPLIVRLADSKRPWIGEQRN-NMSGSPRFG-HPQSFRPEPPLGPPGGGCFPNNSFHGQQNSASLGPPKNASQVASHAPFPPNTTQKPPPRMQESSSS

Query:  FSQMSLQPMKTTQQVCQPPATQMDFSKMQNQVHYQQPRQDSHQQHNLQVHENSYECDRNYKILIGAAPTACGVQTFSGTPNSPMAHPNSRVESPLECDWS
        F+QMS QPM++TQQV QPP TQ DFSKMQNQV  QQPRQDSHQQ NLQ                   P+A GVQTFSGTPNSPM  P+S VE  LECDWS
Subjt:  FSQMSLQPMKTTQQVCQPPATQMDFSKMQNQVHYQQPRQDSHQQHNLQVHENSYECDRNYKILIGAAPTACGVQTFSGTPNSPMAHPNSRVESPLECDWS

Query:  EHTCPDGFKYYYNCVTCESLWEKPEEFALFE-QLKQEKLQKSNHQLHSSLAGLSSPEVPPQSNVFHKKLDLQSSSAVRELDCMRLQSQASPVVGPACV
        EHTCPDGFKYYYNCVT ESLWEKPEEFALFE QLK+EKLQK NHQLHSSL+G+SS EV PQ N+  +KL+ Q SSAVRELDCMRLQS+ASPVV PACV
Subjt:  EHTCPDGFKYYYNCVTCESLWEKPEEFALFE-QLKQEKLQKSNHQLHSSLAGLSSPEVPPQSNVFHKKLDLQSSSAVRELDCMRLQSQASPVVGPACV

A0A1S3BIF0 flowering time control protein FCA5.5e-22174.01Show/hide
Query:  RPSFNPQYPPPPP--------HQQPYQPHQNNWNH-----------PPPHFNGDTNEAFGNGGLRPNSGNQNANLGRKRPRDHSNRTVPADHGE-GGTVK
        +P F PQ PPPPP        H   +Q  QNNWNH           P PHFNG+  E FGNGGLRPN GN NANLGRKRPR++SNRTVP DH E  G VK
Subjt:  RPSFNPQYPPPPP--------HQQPYQPHQNNWNH-----------PPPHFNGDTNEAFGNGGLRPNSGNQNANLGRKRPRDHSNRTVPADHGE-GGTVK

Query:  LYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGELTPINVKYADGEKDRIGGLERLFVGSLNKNA
        LYVAQVPRTGTEEA+RPLF+VHGD+VEIVILRDK+TGQQQGSCFVKY++S+EADRAIRALDNQYTFPGELTPINVKYAD EKDR+G LE+L+VGSLNKN 
Subjt:  LYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGELTPINVKYADGEKDRIGGLERLFVGSLNKNA

Query:  TKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMRGCDQPLIVRLADSKRPWIGEQR-NNMSGSPRFG-HPQSFRPEPP
        TKREIEEVFSPYGFVEDIY++RD+LKQSRG AFVKYARR +A AAIKAL+GNFTMRGCDQPLIVRLAD K+P IGEQR +N+SGSPRFG HPQ FRPEPP
Subjt:  TKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMRGCDQPLIVRLADSKRPWIGEQR-NNMSGSPRFG-HPQSFRPEPP

Query:  LGPPGGGCFPNNSFHGQQNSASLGPPKNASQVASHAPFPPNTTQKPPPRMQESSSSFSQMSLQPMKTTQQVCQPPATQMDFSKMQNQVHYQQPRQDSHQQ
        +G P GGCFPNNS+ GQQNS SLGPP+NASQ ASH PF PN+ QKP P++QE  SSF+QMS QPM++TQQVCQPP  Q DFSKMQNQV  QQPRQDSHQQ
Subjt:  LGPPGGGCFPNNSFHGQQNSASLGPPKNASQVASHAPFPPNTTQKPPPRMQESSSSFSQMSLQPMKTTQQVCQPPATQMDFSKMQNQVHYQQPRQDSHQQ

Query:  HNLQVHENSYECDRNYKILIGAAPTACGVQTFSGTPNSPMAHPNSRVESPLECDWSEHTCPDGFKYYYNCVTCESLWEKPEEFALFE-QLKQEKLQKSNH
         NLQ                   P   GVQTFS T +SPM  P+SRVE  LECDWSEHTCPDGFKYYYNCVT ESLWEKPEEFALFE QLKQEKLQK NH
Subjt:  HNLQVHENSYECDRNYKILIGAAPTACGVQTFSGTPNSPMAHPNSRVESPLECDWSEHTCPDGFKYYYNCVTCESLWEKPEEFALFE-QLKQEKLQKSNH

Query:  QLHSSLAGLSSPEVPPQSNVFHKKLDLQSSSAVRELDCMRLQSQASPVVGPACV
        Q+HSSL G+SS EVPPQ N+F +KLD Q SSAVRELDCMRLQS+ASPVV PACV
Subjt:  QLHSSLAGLSSPEVPPQSNVFHKKLDLQSSSAVRELDCMRLQSQASPVVGPACV

A0A5A7T550 Flowering time control protein FCA3.6e-21277.71Show/hide
Query:  EAFGNGGLRPNSGNQNANLGRKRPRDHSNRTVPADHGE-GGTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRA
        E FGNGGLRPN GN NANLGRKRPR++SNRTVP DH E  G VKLYVAQVPRTGTEEA+RPLF+VHGD+VEIVILRDK+TGQQQGSCFVKY++S+EADRA
Subjt:  EAFGNGGLRPNSGNQNANLGRKRPRDHSNRTVPADHGE-GGTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRA

Query:  IRALDNQYTFPGELTPINVKYADGEKDRIGGLERLFVGSLNKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMR
        IRALDNQYTFPGELTPINVKYAD EKDR+G LE+L+VGSLNKN TKREIEEVFSPYGFVEDIY++RD+LKQSRG AFVKYARR +A AAIKAL+GNFTMR
Subjt:  IRALDNQYTFPGELTPINVKYADGEKDRIGGLERLFVGSLNKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMR

Query:  GCDQPLIVRLADSKRPWIGEQR-NNMSGSPRFG-HPQSFRPEPPLGPPGGGCFPNNSFHGQQNSASLGPPKNASQVASHAPFPPNTTQKPPPRMQESSSS
        GCDQPLIVRLAD K+P IGEQR +N+SGSPRFG HPQ FRPEPP+G P GGCFPNNS+ GQQNS SLGPP+NASQ ASH PF PN+ QKP P++QE  SS
Subjt:  GCDQPLIVRLADSKRPWIGEQR-NNMSGSPRFG-HPQSFRPEPPLGPPGGGCFPNNSFHGQQNSASLGPPKNASQVASHAPFPPNTTQKPPPRMQESSSS

Query:  FSQMSLQPMKTTQQVCQPPATQMDFSKMQNQVHYQQPRQDSHQQHNLQVHENSYECDRNYKILIGAAPTACGVQTFSGTPNSPMAHPNSRVESPLECDWS
        F+QMS QPM++TQQVCQPP  Q DFSKMQNQV  QQPRQDSHQQ NLQ                   P   GVQTFS T +SPM  P+SRVE  LECDWS
Subjt:  FSQMSLQPMKTTQQVCQPPATQMDFSKMQNQVHYQQPRQDSHQQHNLQVHENSYECDRNYKILIGAAPTACGVQTFSGTPNSPMAHPNSRVESPLECDWS

Query:  EHTCPDGFKYYYNCVTCESLWEKPEEFALFE-QLKQEKLQKSNHQLHSSLAGLSSPEVPPQSNVFHKKLDLQSSSAVRELDCMRLQSQASPVVGPACV
        EHTCPDGFKYYYNCVT ESLWEKPEEFALFE QLKQEKLQK NHQ+HSSL G+SS EVPPQ N+F +KLD Q SSAVRELDCMRLQS+ASPVV PACV
Subjt:  EHTCPDGFKYYYNCVTCESLWEKPEEFALFE-QLKQEKLQKSNHQLHSSLAGLSSPEVPPQSNVFHKKLDLQSSSAVRELDCMRLQSQASPVVGPACV

A0A6J1DSB0 CUGBP Elav-like family member 41.3e-21972.54Show/hide
Query:  RPSFNPQY----PPPPPHQQP------------------YQPHQNNWNHP-----------PPHFNGDTNEAFGNGGLRPNSGNQNANLGRKRPRDHSNR
        +P++ PQY    PPPPPHQ P                  +QP QNNWN P            PHFNG+ NE FGNGGLRPN GNQNANLGRKRPR++SNR
Subjt:  RPSFNPQY----PPPPPHQQP------------------YQPHQNNWNHP-----------PPHFNGDTNEAFGNGGLRPNSGNQNANLGRKRPRDHSNR

Query:  TVPADHGEGGTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGELTPINVKYADGEKDRIGG
        TVP+DH E   VKLYVAQVPRTGTEEA+RPLF+VHGD+VEIVILRDK+TGQQQGSCFVKYATSIEADRAI ALDNQ+TFPGE+ PINVKYADGE++R+G 
Subjt:  TVPADHGEGGTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGELTPINVKYADGEKDRIGG

Query:  LERLFVGSLNKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMRGCDQPLIVRLADSKRPWIGEQR-NNMSGSPR
        LE+L+VGSLNKN TKREIEEVFSPYGFVEDIY+MRDELKQSRGCAFVKYARR +A AAIKAL+GN+T+RGCDQPLIVRLAD K+  +GEQR N+MSGSP 
Subjt:  LERLFVGSLNKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMRGCDQPLIVRLADSKRPWIGEQR-NNMSGSPR

Query:  FG-HPQSFRPEPPLGPPGGGCFPNNSFHGQQNSASLGPPKNASQVASHAPFPPNTTQKPPPRMQESSSSFSQMSLQPMKTTQQVCQPPATQMDFSKMQNQ
        FG HPQ FRPEPPLG P GGCFPNN +  QQNSASLGP KNASQVAS+AP  PNT QK  P +QE SSSF+ +  QPM+TTQQVCQPP TQ DFSKMQNQ
Subjt:  FG-HPQSFRPEPPLGPPGGGCFPNNSFHGQQNSASLGPPKNASQVASHAPFPPNTTQKPPPRMQESSSSFSQMSLQPMKTTQQVCQPPATQMDFSKMQNQ

Query:  VH-YQQPRQDSHQQHNLQVHENSYECDRNYKILIGAAPTACGVQTFSGTPNSPMAHPNSRVESPLECDWSEHTCPDGFKYYYNCVTCESLWEKPEEFALF
        V+  QQPR+DS+QQ N QV+EN+              PTA G+QTFSG PNSP+  P SRVE  LECDWSEHTCPDGFKYYYNCVTCES WEKPEEFALF
Subjt:  VH-YQQPRQDSHQQHNLQVHENSYECDRNYKILIGAAPTACGVQTFSGTPNSPMAHPNSRVESPLECDWSEHTCPDGFKYYYNCVTCESLWEKPEEFALF

Query:  E-QLKQEKLQKSNHQLHSSLAGLSSPEVPPQSNVFHKKLDLQSSSAVRELDCMRLQSQASPVVGPACV
        E QLKQEKLQK NHQLHSSL  +SSPEV P  NVF +KL++QSSSAVRELDCMRLQS+ASPVV PACV
Subjt:  E-QLKQEKLQKSNHQLHSSLAGLSSPEVPPQSNVFHKKLDLQSSSAVRELDCMRLQSQASPVVGPACV

A0A6J1GA62 flowering time control protein FCA1.7e-20676.78Show/hide
Query:  LRPNSGNQNANLGRKRPRDHSNRTVPADHGE-GGTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRAIRALDNQ
        +RPN GNQNANLGRKRPR+   RTVPADH E GGT KLYVAQVPRTGTEEA+RPLF VHG+++EIVILRDK+TGQQQGSCFVKYATSIEADRAIRALDNQ
Subjt:  LRPNSGNQNANLGRKRPRDHSNRTVPADHGE-GGTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRAIRALDNQ

Query:  YTFPGELTPINVKYADGEKDRIGGLERLFVGSLNKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMRGCDQPLI
        YTFPGE+TPINVKYADGEK+R+G LE+L+VGSLNKN TKREIEEVFSPYGFVEDIY+MRDELKQSRGCAFVKYARR +A AAI+AL+G +TMRGCDQPLI
Subjt:  YTFPGELTPINVKYADGEKDRIGGLERLFVGSLNKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMRGCDQPLI

Query:  VRLADSKRPWIGEQRNNMSGSPRFG-HPQSFRPEPPLGPPGGGCFPNNSFHGQQNSASLGPPKNASQVASHAPFPPNTTQKPPPRMQESSSSFSQMSLQP
        VRLA+ K+P IGEQR+NMSGSP+FG HP  FRPE PLGPP GGCFPNN + GQQNSASLGPPK+ASQV SHAPF PN+ QKPPP++QE SSSF+QM  +P
Subjt:  VRLADSKRPWIGEQRNNMSGSPRFG-HPQSFRPEPPLGPPGGGCFPNNSFHGQQNSASLGPPKNASQVASHAPFPPNTTQKPPPRMQESSSSFSQMSLQP

Query:  MKTTQQVCQPPATQMDFSKMQNQVHYQQPRQDSH-QQHNLQVHENSYECDRNYKILIGAAPTACGVQTFSGTPNSPMAHPNSRVESPLECDWSEHTCPDG
        M+ TQQVCQPP TQ DFSKM NQVH QQPRQDSH QQ NLQ                   P A  VQTF+GTPNSPM HP+S+VE PLECDWSEHTCPDG
Subjt:  MKTTQQVCQPPATQMDFSKMQNQVHYQQPRQDSH-QQHNLQVHENSYECDRNYKILIGAAPTACGVQTFSGTPNSPMAHPNSRVESPLECDWSEHTCPDG

Query:  FKYYYNCVTCESLWEKPEEFALFE-QLKQEKLQKSNHQLHSSLAGLSSPEVPPQSNVFHKKLDLQSSSAVRELDCMRLQSQASPVVGPACV
        FKYYYNCVTCESLWEKPEEFA FE Q KQEKLQK NH      AGLSSPE  PQ N+F  K ++Q+S+AVRELDCMRLQS+ASPVV PACV
Subjt:  FKYYYNCVTCESLWEKPEEFALFE-QLKQEKLQKSNHQLHSSLAGLSSPEVPPQSNVFHKKLDLQSSSAVRELDCMRLQSQASPVVGPACV

SwissProt top hitse value%identityAlignment
B8BCZ8 Flowering time control protein FCA8.8e-7535.1Show/hide
Query:  GNGGLRPNSGNQNANLGR-KRPRDHSNRTVPADH-GEGGTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRAIR
        G GG R   G +    G   R R  S R   +DH      VKL++  VPRT TE+ VRPLF+ HGDVVE+ +++D+ TG+QQG CFVKYATS EA+RAIR
Subjt:  GNGGLRPNSGNQNANLGR-KRPRDHSNRTVPADH-GEGGTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRAIR

Query:  ALDNQYTFPGELTPINVKYADGEKDRIGGLE-RLFVGSLNKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMRG
        AL NQYT PG + PI V+YADGE++R G +E +LFV SLNK AT +EIEE+F+PYG VED+Y+M+D ++QSRGC FVK++ R  A AA+ AL GN+ MRG
Subjt:  ALDNQYTFPGELTPINVKYADGEKDRIGGLE-RLFVGSLNKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMRG

Query:  CDQPLIVRLADSKRPWIGEQRNNMS-GSPRFG----------------------------HPQSFRPEP----------PLGPPGG--------GCFPNN
        C+QPLI+R AD KRP  GE R   + G P F                             HP S R  P          P+ P G           F   
Subjt:  CDQPLIVRLADSKRPWIGEQRNNMS-GSPRFG----------------------------HPQSFRPEP----------PLGPPGG--------GCFPNN

Query:  SFHGQQNSASLGPPKNASQVASHAP------------FPP----------------NTTQKPP-----------------------------------PR
         F G  + +S     ++S +  + P             PP                N  Q  P                                   P 
Subjt:  SFHGQQNSASLGPPKNASQVASHAP------------FPP----------------NTTQKPP-----------------------------------PR

Query:  MQESSS-------SFSQMSLQ--------PMKTTQQVCQPPATQMDFSKMQNQVHYQQPRQDSHQ---------QHNLQVHENSYECDRNYKILIGAAPT
        MQ+++S       S    S+Q        P     Q+ Q P  QM     Q  +  Q   Q S+Q         Q  LQ+ +   + + N++      PT
Subjt:  MQESSS-------SFSQMSLQ--------PMKTTQQVCQPPATQMDFSKMQNQVHYQQPRQDSHQ---------QHNLQVHENSYECDRNYKILIGAAPT

Query:  ACGVQTFSGTPNSPMAHPNSRVES----------PLECDWSEHTCPDGFKYYYNCVTCESLWEKPEEFALFEQLKQEKLQKS--NHQLHSSLAGLSSPEV
          G    S  P +P A   S + +          PL C+W+EHT P+GFKYYYN +T ES W+KPEE+ L+EQ +Q++ Q+     Q H     +   + 
Subjt:  ACGVQTFSGTPNSPMAHPNSRVES----------PLECDWSEHTCPDGFKYYYNCVTCESLWEKPEEFALFEQLKQEKLQKS--NHQLHSSLAGLSSPEV

Query:  PPQS
        PPQ+
Subjt:  PPQS

O04425 Flowering time control protein FCA7.7e-7135.23Show/hide
Query:  WNHP---PPHFNGDTNEAFGNG-----GLRPNSGN-QNANLGRKRP---RDHSNRTVPADHGEGGTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILR
        +N+P   PP  + D     G        +RP +   Q    G+KR     DH + T         TVKL+V  VPRT TEE +RP F+ HG+V+E+ +++
Subjt:  WNHP---PPHFNGDTNEAFGNG-----GLRPNSGN-QNANLGRKRP---RDHSNRTVPADHGEGGTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILR

Query:  DKVTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGELTPINVKYADGEKDRIGGLE-RLFVGSLNKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGC
        DK TGQQQG CFVKYATS +ADRAIRAL NQ T PG   P+ V+YADGE++RIG LE +LFVGSLNK AT++E+EE+F  +G VED+Y+MRDE +QSRGC
Subjt:  DKVTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGELTPINVKYADGEKDRIGGLE-RLFVGSLNKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGC

Query:  AFVKYARRGIAFAAIKALDGNFTMRGCDQPLIVRLADSKRPWIGEQRN-----NMSGSPRF------------------GHPQSFRPE------------
         FVKY+ +  A AAI  L+G +TMRGC+QPLIVR A+ KRP  GE R       +   PRF                   H   +RP             
Subjt:  AFVKYARRGIAFAAIKALDGNFTMRGCDQPLIVRLADSKRPWIGEQRN-----NMSGSPRF------------------GHPQSFRPE------------

Query:  ------------------------------PPLGP---PGGGCF--------------------------------PNNSFHGQQ-------------NS
                                      PPL P   PG                                    P  +F G Q              +
Subjt:  ------------------------------PPLGP---PGGGCF--------------------------------PNNSFHGQQ-------------NS

Query:  ASLGPPKNASQV-----------------ASHAPFPPNTTQKPPPRMQESSSSFSQMSLQPMKTTQQVCQPPATQMDFSKMQNQVH-YQQPRQDSHQQHN
        + L P +N S+                  ++   FPP + Q+P  +MQ   S  +Q+  Q  ++ Q   Q  ++Q   S++Q QV   QQP Q      N
Subjt:  ASLGPPKNASQV-----------------ASHAPFPPNTTQKPPPRMQESSSSFSQMSLQPMKTTQQVCQPPATQMDFSKMQNQVH-YQQPRQDSHQQHN

Query:  LQVHENSYECDRNYKILIGAAPTACGVQTFSGTPNS---PMAHPNSRVESPLECDWSEHTCPDGFKYYYNCVTCESLWEKPEEFALFEQLKQEKLQ
        L + +N     R  K     +       T   TP S     A   S+    ++C W+EHT PDGFKYYYN +T ES WEKPEE  +FE+ +Q++ Q
Subjt:  LQVHENSYECDRNYKILIGAAPTACGVQTFSGTPNS---PMAHPNSRVESPLECDWSEHTCPDGFKYYYNCVTCESLWEKPEEFALFEQLKQEKLQ

O57406 CUGBP Elav-like family member 1-A1.9e-3238.46Show/hide
Query:  DHGEGGTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTG--QQQGSCFVKYATSIEADRAIRALDNQYTFPGELTPINVKYADGEKDRIGGLE
        DH +  ++K++V QVPR+ +E+ +R LF+ +G V EI +LRD+     Q +G CF+ + T   A  A  AL N    PG   PI +K AD EK+      
Subjt:  DHGEGGTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTG--QQQGSCFVKYATSIEADRAIRALDNQYTFPGELTPINVKYADGEKDRIGGLE

Query:  RLFVGSLNKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMRGCDQPLIVRLADSKR
        +LF+G ++KN  + +I  +FSP+G +E+  ++R     SRGCAFV +  R +A  AIK++    TM GC  P++V+ AD+++
Subjt:  RLFVGSLNKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMRGCDQPLIVRLADSKR

Q6K271 Flowering time control protein FCA3.3e-7434.93Show/hide
Query:  GNGGLRPNSGNQNANLGR-KRPRDHSNRTVPADH-GEGGTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRAIR
        G GG R   G +    G   R R  S R   +DH      VKL++  VPRT TE+ VRPLF+ HGDVVE+ +++D+ TG+QQG CFVKYATS EA+RAIR
Subjt:  GNGGLRPNSGNQNANLGR-KRPRDHSNRTVPADH-GEGGTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRAIR

Query:  ALDNQYTFPGELTPINVKYADGEKDRIGGLE-RLFVGSLNKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMRG
        AL NQYT PG + PI V+YADGE++R G +E +LFV SLNK AT +EIEE+F+PYG VED+Y+M+D ++QSRGC FVK++ R  A AA+ AL GN+ MRG
Subjt:  ALDNQYTFPGELTPINVKYADGEKDRIGGLE-RLFVGSLNKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMRG

Query:  CDQPLIVRLADSKRPWIGEQRNNMS-GSPRFG----------------------------HPQSFRPEP----------PLGPPGG--------GCFPNN
        C+QPLI+R AD KRP  GE R   + G P F                             HP S R  P          P+ P G           F   
Subjt:  CDQPLIVRLADSKRPWIGEQRNNMS-GSPRFG----------------------------HPQSFRPEP----------PLGPPGG--------GCFPNN

Query:  SFHGQQNSASLGPPKNASQVASHAP------------FPP-----------------NTTQKP----------------------------------PPR
         F G  + +S     ++S +  + P             PP                 N   +P                                   P 
Subjt:  SFHGQQNSASLGPPKNASQVASHAP------------FPP-----------------NTTQKP----------------------------------PPR

Query:  MQESSS-------SFSQMSLQ--------PMKTTQQVCQPPATQMDFSKMQNQVHYQQPRQDSHQ---------QHNLQVHENSYECDRNYKILIGAAPT
        MQ+++S       S    S+Q        P     Q+ Q P  QM     Q  +  Q   Q S+Q         Q  LQ+ +   + + N++      PT
Subjt:  MQESSS-------SFSQMSLQ--------PMKTTQQVCQPPATQMDFSKMQNQVHYQQPRQDSHQ---------QHNLQVHENSYECDRNYKILIGAAPT

Query:  ACGVQTFSGTPNSPMAHPNSRVES----------PLECDWSEHTCPDGFKYYYNCVTCESLWEKPEEFALFEQLKQEKLQKS--NHQLHSSLAGLSSPEV
          G    S  P +P A   S + +          PL C+W+EHT P+GFKYYYN +T ES W+KPEE+ L+EQ +Q++ Q+     Q H     +   + 
Subjt:  ACGVQTFSGTPNSPMAHPNSRVES----------PLECDWSEHTCPDGFKYYYNCVTCESLWEKPEEFALFEQLKQEKLQKS--NHQLHSSLAGLSSPEV

Query:  PPQS
        PPQ+
Subjt:  PPQS

Q8GZ26 RNA-binding protein BRN27.5e-3441.04Show/hide
Query:  VKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGELTPINVKYADGEKDRIGGLERLFVGSLNK
        VKL+V QVP+  TE  +  LF+    V E+ I+++K T   +G CF+   T  +AD+ I +  N+ T PG  +P+ VKYADGE +R+    +LFVG L K
Subjt:  VKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGELTPINVKYADGEKDRIGGLERLFVGSLNK

Query:  NATKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMRGCDQPLIVRLADSKR
        N ++ E++ +FS YG ++D+ ++R  L+ S+GC F+KY  +  A AA++AL+G   M G + PLIV+ AD+++
Subjt:  NATKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMRGCDQPLIVRLADSKR

Arabidopsis top hitse value%identityAlignment
AT1G03457.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.3e-3541.04Show/hide
Query:  VKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGELTPINVKYADGEKDRIGGLERLFVGSLNK
        VKL+V QVP+  TE  +  LF+    V E+ I+++K T   +G CF+   T  +AD+ I +  N+ T PG  +P+ VKYADGE +R+    +LFVG L K
Subjt:  VKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGELTPINVKYADGEKDRIGGLERLFVGSLNK

Query:  NATKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMRGCDQPLIVRLADSKR
        N ++ E++ +FS YG ++D+ ++R  L+ S+GC F+KY  +  A AA++AL+G   M G + PLIV+ AD+++
Subjt:  NATKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMRGCDQPLIVRLADSKR

AT2G47310.1 flowering time control protein-related / FCA gamma-related7.9e-6332.77Show/hide
Query:  PSFNPQYPPPPPHQQ----PYQPHQNNWNHP----PPHFNGDTNEAF---GNGGLRPNSGNQNANLGRKRPRDHSNRTVPADHGEGGTVKLYVAQVPRTG
        P  +  +PPPPPH       +  +  N N       PH++G          N    P   +       ++ R  S      D+ +G   KLYVA + +T 
Subjt:  PSFNPQYPPPPPHQQ----PYQPHQNNWNHP----PPHFNGDTNEAF---GNGGLRPNSGNQNANLGRKRPRDHSNRTVPADHGEGGTVKLYVAQVPRTG

Query:  TEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGELTPINVKYADGEKDRIG-------GLERLFVGSLNKNATKR
        TE  +R +F+ +G+V EI++ +DK+TG++   CF+KY    E + AI AL  Q+TFPGE+ P+ V++A+ E++RIG          +L+V  LNK  TK 
Subjt:  TEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGELTPINVKYADGEKDRIG-------GLERLFVGSLNKNATKR

Query:  EIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMRGCDQPLIVRLADSKRPWIGEQRNNMSGSPRFGHPQSFRPEPPLGPPG
        E+ EVFS YG +EDIY+  D++K  RG AFV+++ + +A AAIKAL+G FT+RG DQPLIVR AD K+P +GEQR+  +  P   H   F P        
Subjt:  EIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMRGCDQPLIVRLADSKRPWIGEQRNNMSGSPRFGHPQSFRPEPPLGPPG

Query:  GGCFPNNSFHGQQNSASLGPPKNASQVASHAPFPPNTTQKP-PPRMQESSSSFSQMSLQPMKTTQQVCQPPATQMDFSKMQNQVHYQQPRQDSHQQHNLQ
               ++H Q                   P+P    ++P PPR+ +     SQ +  P + TQ V              ++VH  +P        N +
Subjt:  GGCFPNNSFHGQQNSASLGPPKNASQVASHAPFPPNTTQKP-PPRMQESSSSFSQMSLQPMKTTQQVCQPPATQMDFSKMQNQVHYQQPRQDSHQQHNLQ

Query:  VHENSYECDRNYKILIGAAPTACGVQTFSGTPNSPMAHPNSRVESPLECDWSEHTCPDGFKYYYNCVTCESLWEKPEEFALFEQLKQEKLQKSNHQLHSS
         H+ S            +  T    Q  S   N+   H +    S  ECDWSEHTCP+G KYY++C+TCES WEKP+E++++E+  +E+ +  + ++ S 
Subjt:  VHENSYECDRNYKILIGAAPTACGVQTFSGTPNSPMAHPNSRVESPLECDWSEHTCPDGFKYYYNCVTCESLWEKPEEFALFEQLKQEKLQKSNHQLHSS

Query:  LAGLSSPEV-----PPQSNVFHKKLDLQSSS
             S E        +S+V  +  +LQ  S
Subjt:  LAGLSSPEV-----PPQSNVFHKKLDLQSSS

AT4G16280.2 RNA binding;abscisic acid binding5.5e-7235.23Show/hide
Query:  WNHP---PPHFNGDTNEAFGNG-----GLRPNSGN-QNANLGRKRP---RDHSNRTVPADHGEGGTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILR
        +N+P   PP  + D     G        +RP +   Q    G+KR     DH + T         TVKL+V  VPRT TEE +RP F+ HG+V+E+ +++
Subjt:  WNHP---PPHFNGDTNEAFGNG-----GLRPNSGN-QNANLGRKRP---RDHSNRTVPADHGEGGTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILR

Query:  DKVTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGELTPINVKYADGEKDRIGGLE-RLFVGSLNKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGC
        DK TGQQQG CFVKYATS +ADRAIRAL NQ T PG   P+ V+YADGE++RIG LE +LFVGSLNK AT++E+EE+F  +G VED+Y+MRDE +QSRGC
Subjt:  DKVTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGELTPINVKYADGEKDRIGGLE-RLFVGSLNKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGC

Query:  AFVKYARRGIAFAAIKALDGNFTMRGCDQPLIVRLADSKRPWIGEQRN-----NMSGSPRF------------------GHPQSFRPE------------
         FVKY+ +  A AAI  L+G +TMRGC+QPLIVR A+ KRP  GE R       +   PRF                   H   +RP             
Subjt:  AFVKYARRGIAFAAIKALDGNFTMRGCDQPLIVRLADSKRPWIGEQRN-----NMSGSPRF------------------GHPQSFRPE------------

Query:  ------------------------------PPLGP---PGGGCF--------------------------------PNNSFHGQQ-------------NS
                                      PPL P   PG                                    P  +F G Q              +
Subjt:  ------------------------------PPLGP---PGGGCF--------------------------------PNNSFHGQQ-------------NS

Query:  ASLGPPKNASQV-----------------ASHAPFPPNTTQKPPPRMQESSSSFSQMSLQPMKTTQQVCQPPATQMDFSKMQNQVH-YQQPRQDSHQQHN
        + L P +N S+                  ++   FPP + Q+P  +MQ   S  +Q+  Q  ++ Q   Q  ++Q   S++Q QV   QQP Q      N
Subjt:  ASLGPPKNASQV-----------------ASHAPFPPNTTQKPPPRMQESSSSFSQMSLQPMKTTQQVCQPPATQMDFSKMQNQVH-YQQPRQDSHQQHN

Query:  LQVHENSYECDRNYKILIGAAPTACGVQTFSGTPNS---PMAHPNSRVESPLECDWSEHTCPDGFKYYYNCVTCESLWEKPEEFALFEQLKQEKLQ
        L + +N     R  K     +       T   TP S     A   S+    ++C W+EHT PDGFKYYYN +T ES WEKPEE  +FE+ +Q++ Q
Subjt:  LQVHENSYECDRNYKILIGAAPTACGVQTFSGTPNS---PMAHPNSRVESPLECDWSEHTCPDGFKYYYNCVTCESLWEKPEEFALFEQLKQEKLQ

AT4G16280.3 RNA binding;abscisic acid binding2.9e-6546.13Show/hide
Query:  WNHP---PPHFNGDTNEAFGNG-----GLRPNSGN-QNANLGRKRP---RDHSNRTVPADHGEGGTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILR
        +N+P   PP  + D     G        +RP +   Q    G+KR     DH + T         TVKL+V  VPRT TEE +RP F+ HG+V+E+ +++
Subjt:  WNHP---PPHFNGDTNEAFGNG-----GLRPNSGN-QNANLGRKRP---RDHSNRTVPADHGEGGTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILR

Query:  DKVTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGELTPINVKYADGEKDRIGGLE-RLFVGSLNKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGC
        DK TGQQQG CFVKYATS +ADRAIRAL NQ T PG   P+ V+YADGE++RIG LE +LFVGSLNK AT++E+EE+F  +G VED+Y+MRDE +QSRGC
Subjt:  DKVTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGELTPINVKYADGEKDRIGGLE-RLFVGSLNKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGC

Query:  AFVKYARRGIAFAAIKALDGNFTMRGCDQPLIVRLADSKRPWIGEQRN-----NMSGSPRFGHPQSFRPEPPLGPPGGGCFPNNSFHGQQNSASLGPPKN
         FVKY+ +  A AAI  L+G +TMRGC+QPLIVR A+ KRP  GE R       +   PRF      RP    G   G     N +     S ++GPP N
Subjt:  AFVKYARRGIAFAAIKALDGNFTMRGCDQPLIVRLADSKRPWIGEQRN-----NMSGSPRFGHPQSFRPEPPLGPPGGGCFPNNSFHGQQNSASLGPPKN

Query:  ASQVASHAPFPPNTTQKPPPRMQ
             + + F P   Q   P  Q
Subjt:  ASQVASHAPFPPNTTQKPPPRMQ

AT4G16280.4 RNA binding;abscisic acid binding4.5e-7436.26Show/hide
Query:  DHSNRTVPADHGEGGTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGELTPINVKYADGEK
        DH + T         TVKL+V  VPRT TEE +RP F+ HG+V+E+ +++DK TGQQQG CFVKYATS +ADRAIRAL NQ T PG   P+ V+YADGE+
Subjt:  DHSNRTVPADHGEGGTVKLYVAQVPRTGTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGELTPINVKYADGEK

Query:  DRIGGLE-RLFVGSLNKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMRGCDQPLIVRLADSKRPWIGEQRN--
        +RIG LE +LFVGSLNK AT++E+EE+F  +G VED+Y+MRDE +QSRGC FVKY+ +  A AAI  L+G +TMRGC+QPLIVR A+ KRP  GE R   
Subjt:  DRIGGLE-RLFVGSLNKNATKREIEEVFSPYGFVEDIYVMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMRGCDQPLIVRLADSKRPWIGEQRN--

Query:  ---NMSGSPRF------------------GHPQSFRPE------------------------------------------PPLGP---PGGGCF------
            +   PRF                   H   +RP                                           PPL P   PG          
Subjt:  ---NMSGSPRF------------------GHPQSFRPE------------------------------------------PPLGP---PGGGCF------

Query:  --------------------------PNNSFHGQQ-------------NSASLGPPKNASQV-----------------ASHAPFPPNTTQKPPPRMQES
                                  P  +F G Q              ++ L P +N S+                  ++   FPP + Q+P  +MQ  
Subjt:  --------------------------PNNSFHGQQ-------------NSASLGPPKNASQV-----------------ASHAPFPPNTTQKPPPRMQES

Query:  SSSFSQMSLQPMKTTQQVCQPPATQMDFSKMQNQVH-YQQPRQDSHQQHNLQVHENSYECDRNYKILIGAAPTACGVQTFSGTPNS---PMAHPNSRVES
         S  +Q+  Q  ++ Q   Q  ++Q   S++Q QV   QQP Q      NL + +N     R  K     +       T   TP S     A   S+   
Subjt:  SSSFSQMSLQPMKTTQQVCQPPATQMDFSKMQNQVH-YQQPRQDSHQQHNLQVHENSYECDRNYKILIGAAPTACGVQTFSGTPNS---PMAHPNSRVES

Query:  PLECDWSEHTCPDGFKYYYNCVTCESLWEKPEEFALFEQLKQEKLQ
         ++C W+EHT PDGFKYYYN +T ES WEKPEE  +FE+ +Q++ Q
Subjt:  PLECDWSEHTCPDGFKYYYNCVTCESLWEKPEEFALFEQLKQEKLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCAGTGCGGAAACTTGCAGGGAAGTTTTGATGGCCATCTATCTTTGATCTACACCGTTCGTCCCAGTTTCAACCCACAGTACCCGCCTCCGCCGCCGCACCAGCA
GCCGTACCAGCCCCACCAGAACAACTGGAACCATCCGCCGCCGCACTTCAACGGCGACACTAATGAGGCCTTCGGCAACGGCGGCTTGAGGCCGAATTCTGGAAATCAGA
ATGCGAATTTGGGGCGTAAACGGCCAAGAGACCATTCCAACAGAACAGTTCCGGCAGATCATGGTGAGGGTGGTACGGTGAAATTGTATGTTGCACAAGTTCCTCGGACA
GGAACTGAAGAAGCGGTTCGTCCTTTGTTTCAAGTACATGGTGATGTTGTCGAGATAGTAATATTAAGGGATAAAGTAACTGGCCAACAACAAGGTAGTTGTTTTGTGAA
ATATGCTACCTCCATTGAAGCAGACAGGGCAATCCGAGCTTTGGACAATCAGTATACTTTTCCTGGAGAACTGACTCCTATCAATGTGAAATATGCCGATGGTGAAAAGG
ACCGCATTGGAGGACTTGAAAGACTGTTTGTTGGTAGCTTGAATAAAAATGCTACCAAAAGGGAAATTGAGGAGGTATTCTCACCTTATGGCTTTGTTGAGGATATTTAT
GTCATGCGTGATGAGCTGAAGCAAAGCCGAGGATGTGCCTTTGTTAAGTATGCTCGTAGAGGTATTGCATTTGCAGCAATCAAAGCATTGGATGGGAATTTTACAATGAG
GGGTTGTGATCAGCCATTGATTGTTCGTCTTGCAGACTCTAAAAGACCATGGATTGGTGAGCAAAGAAACAACATGTCTGGAAGCCCAAGATTTGGTCATCCTCAATCGT
TTAGACCTGAGCCTCCTCTTGGTCCTCCTGGTGGAGGATGTTTCCCCAATAATTCATTTCACGGACAGCAAAATTCTGCAAGTTTAGGACCACCAAAGAATGCTTCCCAA
GTAGCATCTCATGCGCCTTTTCCTCCTAATACTACACAGAAACCGCCCCCTCGAATGCAAGAATCTTCATCATCTTTTTCTCAAATGTCATTACAACCAATGAAAACAAC
ACAGCAAGTTTGTCAGCCTCCTGCTACACAGATGGATTTTTCTAAGATGCAGAATCAGGTGCATTATCAACAACCCAGGCAAGATTCACACCAGCAGCACAATTTACAGG
TTCATGAAAATTCATATGAATGCGATCGAAATTATAAAATTCTCATAGGAGCCGCTCCTACAGCATGTGGCGTTCAAACCTTTAGCGGTACTCCCAACTCACCTATGGCG
CATCCAAATTCTCGTGTAGAAAGTCCTTTGGAGTGTGATTGGAGTGAACACACCTGCCCAGACGGTTTCAAATACTATTATAATTGTGTGACCTGTGAAAGTTTGTGGGA
GAAGCCAGAGGAGTTTGCCTTGTTTGAGCAACTAAAGCAGGAGAAGCTTCAAAAATCAAATCATCAGCTTCATTCTTCATTAGCAGGTCTCTCTTCTCCTGAAGTGCCGC
CTCAGTCAAATGTCTTCCATAAAAAACTCGACCTCCAATCTTCCTCAGCTGTACGAGAGTTGGATTGTATGCGACTTCAATCTCAAGCAAGTCCTGTTGTTGGTCCAGCC
TGTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCCAGTGCGGAAACTTGCAGGGAAGTTTTGATGGCCATCTATCTTTGATCTACACCGTTCGTCCCAGTTTCAACCCACAGTACCCGCCTCCGCCGCCGCACCAGCA
GCCGTACCAGCCCCACCAGAACAACTGGAACCATCCGCCGCCGCACTTCAACGGCGACACTAATGAGGCCTTCGGCAACGGCGGCTTGAGGCCGAATTCTGGAAATCAGA
ATGCGAATTTGGGGCGTAAACGGCCAAGAGACCATTCCAACAGAACAGTTCCGGCAGATCATGGTGAGGGTGGTACGGTGAAATTGTATGTTGCACAAGTTCCTCGGACA
GGAACTGAAGAAGCGGTTCGTCCTTTGTTTCAAGTACATGGTGATGTTGTCGAGATAGTAATATTAAGGGATAAAGTAACTGGCCAACAACAAGGTAGTTGTTTTGTGAA
ATATGCTACCTCCATTGAAGCAGACAGGGCAATCCGAGCTTTGGACAATCAGTATACTTTTCCTGGAGAACTGACTCCTATCAATGTGAAATATGCCGATGGTGAAAAGG
ACCGCATTGGAGGACTTGAAAGACTGTTTGTTGGTAGCTTGAATAAAAATGCTACCAAAAGGGAAATTGAGGAGGTATTCTCACCTTATGGCTTTGTTGAGGATATTTAT
GTCATGCGTGATGAGCTGAAGCAAAGCCGAGGATGTGCCTTTGTTAAGTATGCTCGTAGAGGTATTGCATTTGCAGCAATCAAAGCATTGGATGGGAATTTTACAATGAG
GGGTTGTGATCAGCCATTGATTGTTCGTCTTGCAGACTCTAAAAGACCATGGATTGGTGAGCAAAGAAACAACATGTCTGGAAGCCCAAGATTTGGTCATCCTCAATCGT
TTAGACCTGAGCCTCCTCTTGGTCCTCCTGGTGGAGGATGTTTCCCCAATAATTCATTTCACGGACAGCAAAATTCTGCAAGTTTAGGACCACCAAAGAATGCTTCCCAA
GTAGCATCTCATGCGCCTTTTCCTCCTAATACTACACAGAAACCGCCCCCTCGAATGCAAGAATCTTCATCATCTTTTTCTCAAATGTCATTACAACCAATGAAAACAAC
ACAGCAAGTTTGTCAGCCTCCTGCTACACAGATGGATTTTTCTAAGATGCAGAATCAGGTGCATTATCAACAACCCAGGCAAGATTCACACCAGCAGCACAATTTACAGG
TTCATGAAAATTCATATGAATGCGATCGAAATTATAAAATTCTCATAGGAGCCGCTCCTACAGCATGTGGCGTTCAAACCTTTAGCGGTACTCCCAACTCACCTATGGCG
CATCCAAATTCTCGTGTAGAAAGTCCTTTGGAGTGTGATTGGAGTGAACACACCTGCCCAGACGGTTTCAAATACTATTATAATTGTGTGACCTGTGAAAGTTTGTGGGA
GAAGCCAGAGGAGTTTGCCTTGTTTGAGCAACTAAAGCAGGAGAAGCTTCAAAAATCAAATCATCAGCTTCATTCTTCATTAGCAGGTCTCTCTTCTCCTGAAGTGCCGC
CTCAGTCAAATGTCTTCCATAAAAAACTCGACCTCCAATCTTCCTCAGCTGTACGAGAGTTGGATTGTATGCGACTTCAATCTCAAGCAAGTCCTGTTGTTGGTCCAGCC
TGTGTTTAA
Protein sequenceShow/hide protein sequence
MIQCGNLQGSFDGHLSLIYTVRPSFNPQYPPPPPHQQPYQPHQNNWNHPPPHFNGDTNEAFGNGGLRPNSGNQNANLGRKRPRDHSNRTVPADHGEGGTVKLYVAQVPRT
GTEEAVRPLFQVHGDVVEIVILRDKVTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGELTPINVKYADGEKDRIGGLERLFVGSLNKNATKREIEEVFSPYGFVEDIY
VMRDELKQSRGCAFVKYARRGIAFAAIKALDGNFTMRGCDQPLIVRLADSKRPWIGEQRNNMSGSPRFGHPQSFRPEPPLGPPGGGCFPNNSFHGQQNSASLGPPKNASQ
VASHAPFPPNTTQKPPPRMQESSSSFSQMSLQPMKTTQQVCQPPATQMDFSKMQNQVHYQQPRQDSHQQHNLQVHENSYECDRNYKILIGAAPTACGVQTFSGTPNSPMA
HPNSRVESPLECDWSEHTCPDGFKYYYNCVTCESLWEKPEEFALFEQLKQEKLQKSNHQLHSSLAGLSSPEVPPQSNVFHKKLDLQSSSAVRELDCMRLQSQASPVVGPA
CV