; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0024606 (gene) of Chayote v1 genome

Gene IDSed0024606
OrganismSechium edule (Chayote v1)
Description60S acidic ribosomal protein P1-like
Genome locationLG12:152919..154531
RNA-Seq ExpressionSed0024606
SyntenySed0024606
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0006414 - translational elongation (biological process)
GO:0032147 - activation of protein kinase activity (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0030295 - protein kinase activator activity (molecular function)
GO:0043021 - ribonucleoprotein complex binding (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597015.1 60S acidic ribosomal protein P1-2, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4186.61Show/hide
Query:  MSIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGAGGGAPVAAAVPAGGASGGAAAAAPPPEEKKEEPKE
        MS+GE+ACSYAA+ILYDDNI +T+EKLATLV  A V+  ESYWFSLFAKLAEKRNIGDLIMNVGAGGGA VAAAVPAGGA G AAAAAPPPEEKKEEPKE
Subjt:  MSIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGAGGGAPVAAAVPAGGASGGAAAAAPPPEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESDDDMGFSLFD
Subjt:  ESDDDMGFSLFD

XP_004133766.1 60S acidic ribosomal protein P1 [Cucumis sativus]8.0e-4184.07Show/hide
Query:  MSIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGAGGGAPVAAAVPAGGAS-GGAAAAAPPPEEKKEEPK
        MS GE+ACSYAA+ILYDDNI IT+EK+ATLV  AKV +VESYW+ LFAKLAEKR+IGDLI+NVGAGGGA VAAA PAGGA+ GGAAAAAPPPEEKKEEPK
Subjt:  MSIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGAGGGAPVAAAVPAGGAS-GGAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

XP_008437779.1 PREDICTED: 60S acidic ribosomal protein P1-like [Cucumis melo]9.5e-4285.84Show/hide
Query:  MSIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGAGGGAPVAAAVPAGG-ASGGAAAAAPPPEEKKEEPK
        MS GE+ACSYAA+ILYDDNI IT+EK+ATLV  A V +VESYW+SLFAKLAEKRNIGDLI+NVGAGGGA VAAAVPAGG A+GGAAAAAPPPEEKKEEPK
Subjt:  MSIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGAGGGAPVAAAVPAGG-ASGGAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

XP_022951343.1 60S acidic ribosomal protein P1-like [Cucurbita moschata]1.2e-4186.61Show/hide
Query:  MSIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGAGGGAPVAAAVPAGGASGGAAAAAPPPEEKKEEPKE
        MS+GE+ACSYAA+ILYDDNI +T+EKLATLV  A V+  ESYWFSLFAKLAEKRNIGDLIMNVGAGGGA VAAAVPAGGA G AAAAAPPPEEKKEEPKE
Subjt:  MSIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGAGGGAPVAAAVPAGGASGGAAAAAPPPEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESDDDMGFSLFD
Subjt:  ESDDDMGFSLFD

XP_022974253.1 60S acidic ribosomal protein P1-like [Cucurbita maxima]1.6e-4186.61Show/hide
Query:  MSIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGAGGGAPVAAAVPAGGASGGAAAAAPPPEEKKEEPKE
        MS+GE+ACSYAA+ILYDDNI +T+EKLATLV  A V + ESYWFSLFAKLAEKRNIGDLIMNVGAGGGA VAAAVPAGGA G AAAAAPPPEEKKEEPKE
Subjt:  MSIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGAGGGAPVAAAVPAGGASGGAAAAAPPPEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESDDDMGFSLFD
Subjt:  ESDDDMGFSLFD

TrEMBL top hitse value%identityAlignment
A0A0A0L5M7 Uncharacterized protein3.9e-4184.07Show/hide
Query:  MSIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGAGGGAPVAAAVPAGGAS-GGAAAAAPPPEEKKEEPK
        MS GE+ACSYAA+ILYDDNI IT+EK+ATLV  AKV +VESYW+ LFAKLAEKR+IGDLI+NVGAGGGA VAAA PAGGA+ GGAAAAAPPPEEKKEEPK
Subjt:  MSIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGAGGGAPVAAAVPAGGAS-GGAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

A0A1S3AUG9 60S acidic ribosomal protein P1-like4.6e-4285.84Show/hide
Query:  MSIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGAGGGAPVAAAVPAGG-ASGGAAAAAPPPEEKKEEPK
        MS GE+ACSYAA+ILYDDNI IT+EK+ATLV  A V +VESYW+SLFAKLAEKRNIGDLI+NVGAGGGA VAAAVPAGG A+GGAAAAAPPPEEKKEEPK
Subjt:  MSIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGAGGGAPVAAAVPAGG-ASGGAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

A0A5D3DB57 60S acidic ribosomal protein P1-like4.6e-4285.84Show/hide
Query:  MSIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGAGGGAPVAAAVPAGG-ASGGAAAAAPPPEEKKEEPK
        MS GE+ACSYAA+ILYDDNI IT+EK+ATLV  A V +VESYW+SLFAKLAEKRNIGDLI+NVGAGGGA VAAAVPAGG A+GGAAAAAPPPEEKKEEPK
Subjt:  MSIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGAGGGAPVAAAVPAGG-ASGGAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

A0A6J1GHG1 60S acidic ribosomal protein P1-like6.0e-4286.61Show/hide
Query:  MSIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGAGGGAPVAAAVPAGGASGGAAAAAPPPEEKKEEPKE
        MS+GE+ACSYAA+ILYDDNI +T+EKLATLV  A V+  ESYWFSLFAKLAEKRNIGDLIMNVGAGGGA VAAAVPAGGA G AAAAAPPPEEKKEEPKE
Subjt:  MSIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGAGGGAPVAAAVPAGGASGGAAAAAPPPEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESDDDMGFSLFD
Subjt:  ESDDDMGFSLFD

A0A6J1ICK4 60S acidic ribosomal protein P1-like7.8e-4286.61Show/hide
Query:  MSIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGAGGGAPVAAAVPAGGASGGAAAAAPPPEEKKEEPKE
        MS+GE+ACSYAA+ILYDDNI +T+EKLATLV  A V + ESYWFSLFAKLAEKRNIGDLIMNVGAGGGA VAAAVPAGGA G AAAAAPPPEEKKEEPKE
Subjt:  MSIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGAGGGAPVAAAVPAGGASGGAAAAAPPPEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESDDDMGFSLFD
Subjt:  ESDDDMGFSLFD

SwissProt top hitse value%identityAlignment
O23095 60S acidic ribosomal protein P1-23.5e-3169.3Show/hide
Query:  SIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGA---GGGAPVAAAVPAGGASGGAAAAAPPPEEKKEEP
        ++GELACSYA MIL D+ I+ITS+K+ATLV  A V+ +ESYW  LFAK+AEKRN+ DLIMNVGA   GGGAPV+AA PA  A+GGAAAAAP  EEKK+EP
Subjt:  SIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGA---GGGAPVAAAVPAGGASGGAAAAAPPPEEKKEEP

Query:  KEESDDDMGFSLFD
         EESD D+GF LFD
Subjt:  KEESDDDMGFSLFD

P52855 60S acidic ribosomal protein P19.3e-3271.68Show/hide
Query:  MSIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGAGGG-APVAAAVPAGGASGGAAAAAPPPEEKKEEPK
        M+ GELAC YAA+IL DD I+IT+EK+AT+V  A ++ VESYW +LFAKL EKRN+ DLI++VG+GGG APVAAA PAGGA   AAAAAP  EEKKEE K
Subjt:  MSIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGAGGG-APVAAAVPAGGASGGAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

Q8LCW9 60S acidic ribosomal protein P1-13.3e-2967.26Show/hide
Query:  SIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGA--GGGAPVAAAVPAGGASGGAAAAAPPPEEKKEEPK
        ++GELACSYA MIL D+ I+IT++K+ATLV  A V ++ESYW  LFAK+AEKRN+ DLIMNVGA  GGGAPVAAA PA G  GGAAAA    E+KK+EP 
Subjt:  SIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGA--GGGAPVAAAVPAGGASGGAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESD D+GF LFD
Subjt:  EESDDDMGFSLFD

Q8LEQ0 60S acidic ribosomal protein P1-31.1e-2969.3Show/hide
Query:  SIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGA--GGGAPVAAAVPAGGASGGAAAAAPPPEE-KKEEP
        ++GELACSYA MIL D+ I+IT++K+ATLV  A V  +ESYW  LFAK+AEKRN+ DLIMNVGA  GGGAPVAAA PA G  GGAAAAAP  EE KK+EP
Subjt:  SIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGA--GGGAPVAAAVPAGGASGGAAAAAPPPEE-KKEEP

Query:  KEESDDDMGFSLFD
         EESD D+GF LFD
Subjt:  KEESDDDMGFSLFD

Q9HGV0 60S acidic ribosomal protein P19.3e-2459.65Show/hide
Query:  MSIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGAGGGAPVAAAVPAGGASGGAA--AAAPPPEEKKEEP
        MS  ELACSYAA+IL DD + IT++K+ TL+  AKV +VE  W SLFAK  E ++I DL+ NVG+GG A  AA    GGA+ GAA  A A   EEKKEE 
Subjt:  MSIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGAGGGAPVAAAVPAGGASGGAA--AAAPPPEEKKEEP

Query:  KEESDDDMGFSLFD
        KEESD+DMGF LFD
Subjt:  KEESDDDMGFSLFD

Arabidopsis top hitse value%identityAlignment
AT1G01100.1 60S acidic ribosomal protein family2.3e-3067.26Show/hide
Query:  SIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGA--GGGAPVAAAVPAGGASGGAAAAAPPPEEKKEEPK
        ++GELACSYA MIL D+ I+IT++K+ATLV  A V ++ESYW  LFAK+AEKRN+ DLIMNVGA  GGGAPVAAA PA G  GGAAAA    E+KK+EP 
Subjt:  SIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGA--GGGAPVAAAVPAGGASGGAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESD D+GF LFD
Subjt:  EESDDDMGFSLFD

AT4G00810.1 60S acidic ribosomal protein family2.5e-3269.3Show/hide
Query:  SIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGA---GGGAPVAAAVPAGGASGGAAAAAPPPEEKKEEP
        ++GELACSYA MIL D+ I+ITS+K+ATLV  A V+ +ESYW  LFAK+AEKRN+ DLIMNVGA   GGGAPV+AA PA  A+GGAAAAAP  EEKK+EP
Subjt:  SIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGA---GGGAPVAAAVPAGGASGGAAAAAPPPEEKKEEP

Query:  KEESDDDMGFSLFD
         EESD D+GF LFD
Subjt:  KEESDDDMGFSLFD

AT4G00810.2 60S acidic ribosomal protein family2.5e-3269.3Show/hide
Query:  SIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGA---GGGAPVAAAVPAGGASGGAAAAAPPPEEKKEEP
        ++GELACSYA MIL D+ I+ITS+K+ATLV  A V+ +ESYW  LFAK+AEKRN+ DLIMNVGA   GGGAPV+AA PA  A+GGAAAAAP  EEKK+EP
Subjt:  SIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGA---GGGAPVAAAVPAGGASGGAAAAAPPPEEKKEEP

Query:  KEESDDDMGFSLFD
         EESD D+GF LFD
Subjt:  KEESDDDMGFSLFD

AT5G47700.1 60S acidic ribosomal protein family8.0e-3169.3Show/hide
Query:  SIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGA--GGGAPVAAAVPAGGASGGAAAAAPPPEE-KKEEP
        ++GELACSYA MIL D+ I+IT++K+ATLV  A V  +ESYW  LFAK+AEKRN+ DLIMNVGA  GGGAPVAAA PA G  GGAAAAAP  EE KK+EP
Subjt:  SIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGA--GGGAPVAAAVPAGGASGGAAAAAPPPEE-KKEEP

Query:  KEESDDDMGFSLFD
         EESD D+GF LFD
Subjt:  KEESDDDMGFSLFD

AT5G47700.2 60S acidic ribosomal protein family8.0e-3169.3Show/hide
Query:  SIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGA--GGGAPVAAAVPAGGASGGAAAAAPPPEE-KKEEP
        ++GELACSYA MIL D+ I+IT++K+ATLV  A V  +ESYW  LFAK+AEKRN+ DLIMNVGA  GGGAPVAAA PA G  GGAAAAAP  EE KK+EP
Subjt:  SIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGA--GGGAPVAAAVPAGGASGGAAAAAPPPEE-KKEEP

Query:  KEESDDDMGFSLFD
         EESD D+GF LFD
Subjt:  KEESDDDMGFSLFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATCGGAGAACTTGCTTGCTCCTATGCTGCCATGATTCTCTACGACGACAACATCTCTATTACTTCGGAGAAGCTTGCCACGCTTGTGAATACTGCTAAAGTGCA
GAATGTGGAGTCTTATTGGTTCAGCCTTTTTGCTAAACTAGCAGAGAAGCGTAACATTGGTGATTTGATCATGAATGTTGGGGCTGGTGGAGGTGCCCCAGTTGCCGCCG
CTGTCCCAGCCGGTGGGGCTTCTGGTGGGGCTGCTGCAGCTGCTCCTCCTCCTGAAGAGAAAAAGGAAGAACCTAAGGAGGAGAGTGACGATGATATGGGATTCAGTTTG
TTTGATTAG
mRNA sequenceShow/hide mRNA sequence
CGCTTCTGTGTTGCGCCGAAGATTGTTTAGAGCTTCCGCCATCGCCCAATTCTTCTGTGAACAATGTCGATCGGAGAACTTGCTTGCTCCTATGCTGCCATGATTCTCTA
CGACGACAACATCTCTATTACTTCGGAGAAGCTTGCCACGCTTGTGAATACTGCTAAAGTGCAGAATGTGGAGTCTTATTGGTTCAGCCTTTTTGCTAAACTAGCAGAGA
AGCGTAACATTGGTGATTTGATCATGAATGTTGGGGCTGGTGGAGGTGCCCCAGTTGCCGCCGCTGTCCCAGCCGGTGGGGCTTCTGGTGGGGCTGCTGCAGCTGCTCCT
CCTCCTGAAGAGAAAAAGGAAGAACCTAAGGAGGAGAGTGACGATGATATGGGATTCAGTTTGTTTGATTAGGTCCATATGGCTTTGCATATTTTGAACTTCGATTATCC
TTGAAAAGCCAGAGAGCTCTAGTTATTTTATAAACATGTAATTGGAATATCCATCCGTGACAAAAAATTTCCAGAAGTTTTGATTTGAATTTGATTGCTTGTTTTCTGTT
GAGATATATTTTGTTCTATATATCTTATGTTCAATCAGTATTCTAGGTATATCACGTTGTTGACGATTGTTGCTTTTATGTGTTTGTTCGCTATTTAAGCAAACTCCAGT
ATTCTAGCTACACTTTTTGATGTTTTTTTGTAGTTCTTCTGAACCTCACTTTTCTTCCTAAAGAGATAGGATGAGATTGTGAAGAAGAAAACTCTTTGATCAGTAGAAAT
CAAGTTCTTATATGCCTACATTGAAATGAAGAATTGAAAAGATTGAAAGTTGCTAAGAAATCTCCTCCTGTTACTG
Protein sequenceShow/hide protein sequence
MSIGELACSYAAMILYDDNISITSEKLATLVNTAKVQNVESYWFSLFAKLAEKRNIGDLIMNVGAGGGAPVAAAVPAGGASGGAAAAAPPPEEKKEEPKEESDDDMGFSL
FD