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Sed0024614 (gene) of Chayote v1 genome

Gene IDSed0024614
OrganismSechium edule (Chayote v1)
DescriptionDUF4378 domain-containing protein/VARLMGL domain-containing protein
Genome locationLG04:32263312..32264059
RNA-Seq ExpressionSed0024614
SyntenySed0024614
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575095.1 hypothetical protein SDJN03_25734, partial [Cucurbita argyrosperma subsp. sororia]5.8e-2272.84Show/hide
Query:  GNKLRSSVQGQDVIGVGFSKLDPVGADTELLDSASSTTDEASTTKFTSSSISRGTTGHVEWELEYIKNILCNVELMFNDYV
        GNKL SSVQGQDV+G+GF K +PV  DTELLDSASS TDEAS +KFT+SS S+GT   +EWELEYI +IL NVELMF DYV
Subjt:  GNKLRSSVQGQDVIGVGFSKLDPVGADTELLDSASSTTDEASTTKFTSSSISRGTTGHVEWELEYIKNILCNVELMFNDYV

XP_008458381.1 PREDICTED: uncharacterized protein LOC103497806 [Cucumis melo]4.5e-2272.84Show/hide
Query:  GNKLRSSVQGQDVIGVGFSKLDPVGADTELLDSASSTTDEASTTKFTSSSISRGTTGHVEWELEYIKNILCNVELMFNDYV
        GN L SSVQGQDVIG+GFSK + V  DTELLDSA+S TDE  T+KFT SSISRGT   +EWELEYIK+ILC+VELMF DY+
Subjt:  GNKLRSSVQGQDVIGVGFSKLDPVGADTELLDSASSTTDEASTTKFTSSSISRGTTGHVEWELEYIKNILCNVELMFNDYV

XP_022138593.1 uncharacterized protein LOC111009714 [Momordica charantia]1.2e-2276.25Show/hide
Query:  GNKLRSSVQGQDVIGVGFSKLDPVGADTELLDSASSTTDEASTTKFTSSSISRGTTGHVEWELEYIKNILCNVELMFNDY
        GNKL SSVQGQDVI +GFSK DPVGADTELLDSASS TDE   +KFT SS+SR   G++EWELEYIK ILC+VELMF DY
Subjt:  GNKLRSSVQGQDVIGVGFSKLDPVGADTELLDSASSTTDEASTTKFTSSSISRGTTGHVEWELEYIKNILCNVELMFNDY

XP_022959318.1 uncharacterized protein LOC111460329 [Cucurbita moschata]5.8e-2272.84Show/hide
Query:  GNKLRSSVQGQDVIGVGFSKLDPVGADTELLDSASSTTDEASTTKFTSSSISRGTTGHVEWELEYIKNILCNVELMFNDYV
        GNKL SSVQGQDV+G+GF K +PV  DTELLDSASS TDEAS +KFT+SS S+GT   +EWELEYI +IL NVELMF DYV
Subjt:  GNKLRSSVQGQDVIGVGFSKLDPVGADTELLDSASSTTDEASTTKFTSSSISRGTTGHVEWELEYIKNILCNVELMFNDYV

XP_023548703.1 uncharacterized protein LOC111807277 [Cucurbita pepo subsp. pepo]2.0e-2274.07Show/hide
Query:  GNKLRSSVQGQDVIGVGFSKLDPVGADTELLDSASSTTDEASTTKFTSSSISRGTTGHVEWELEYIKNILCNVELMFNDYV
        GNKL SSVQGQDV+G+GF K +PV ADTELLDSASS TDEAS +KFT+SS S+GT   +EWELEYI +IL NVELMF DYV
Subjt:  GNKLRSSVQGQDVIGVGFSKLDPVGADTELLDSASSTTDEASTTKFTSSSISRGTTGHVEWELEYIKNILCNVELMFNDYV

TrEMBL top hitse value%identityAlignment
A0A1S4E241 uncharacterized protein LOC1034978062.2e-2272.84Show/hide
Query:  GNKLRSSVQGQDVIGVGFSKLDPVGADTELLDSASSTTDEASTTKFTSSSISRGTTGHVEWELEYIKNILCNVELMFNDYV
        GN L SSVQGQDVIG+GFSK + V  DTELLDSA+S TDE  T+KFT SSISRGT   +EWELEYIK+ILC+VELMF DY+
Subjt:  GNKLRSSVQGQDVIGVGFSKLDPVGADTELLDSASSTTDEASTTKFTSSSISRGTTGHVEWELEYIKNILCNVELMFNDYV

A0A5D3BXV6 DUF4378 domain-containing protein/VARLMGL domain-containing protein2.2e-2272.84Show/hide
Query:  GNKLRSSVQGQDVIGVGFSKLDPVGADTELLDSASSTTDEASTTKFTSSSISRGTTGHVEWELEYIKNILCNVELMFNDYV
        GN L SSVQGQDVIG+GFSK + V  DTELLDSA+S TDE  T+KFT SSISRGT   +EWELEYIK+ILC+VELMF DY+
Subjt:  GNKLRSSVQGQDVIGVGFSKLDPVGADTELLDSASSTTDEASTTKFTSSSISRGTTGHVEWELEYIKNILCNVELMFNDYV

A0A6J1CDE9 uncharacterized protein LOC1110097145.7e-2376.25Show/hide
Query:  GNKLRSSVQGQDVIGVGFSKLDPVGADTELLDSASSTTDEASTTKFTSSSISRGTTGHVEWELEYIKNILCNVELMFNDY
        GNKL SSVQGQDVI +GFSK DPVGADTELLDSASS TDE   +KFT SS+SR   G++EWELEYIK ILC+VELMF DY
Subjt:  GNKLRSSVQGQDVIGVGFSKLDPVGADTELLDSASSTTDEASTTKFTSSSISRGTTGHVEWELEYIKNILCNVELMFNDY

A0A6J1H5L0 uncharacterized protein LOC1114603292.8e-2272.84Show/hide
Query:  GNKLRSSVQGQDVIGVGFSKLDPVGADTELLDSASSTTDEASTTKFTSSSISRGTTGHVEWELEYIKNILCNVELMFNDYV
        GNKL SSVQGQDV+G+GF K +PV  DTELLDSASS TDEAS +KFT+SS S+GT   +EWELEYI +IL NVELMF DYV
Subjt:  GNKLRSSVQGQDVIGVGFSKLDPVGADTELLDSASSTTDEASTTKFTSSSISRGTTGHVEWELEYIKNILCNVELMFNDYV

A0A6J1L4T5 uncharacterized protein LOC1114991396.3e-2272.84Show/hide
Query:  GNKLRSSVQGQDVIGVGFSKLDPVGADTELLDSASSTTDEASTTKFTSSSISRGTTGHVEWELEYIKNILCNVELMFNDYV
        GNKL SSVQGQDV+G+GF K +PV  DTELLDSASS TDEAS +KFT+SSIS+ T   +EWELEYI +IL NVELMF DYV
Subjt:  GNKLRSSVQGQDVIGVGFSKLDPVGADTELLDSASSTTDEASTTKFTSSSISRGTTGHVEWELEYIKNILCNVELMFNDYV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGAACCAACACAGCTCTGTTGGCAGCAAGTTATCTGACCAATACTTTTTCTTCTAGATTGAAGAATGTTGCAGTAATCGGATTGATGCTAACGAAGGCCAGTCG
CTTAAAGTTCGACATCCGAGTCCCGTCTCTATTCTTGAACATTCCTTTTCATCTGAAAGCTGTGACTCATCGGATAGTAGTAGCAGATATGGTAGATGATTTTTCTTTAC
CAAGAAGAGATTACTCTTATTTGCATATATACATCACTAAAAAGTATTTCAATTTAACAGGAAACAAGTTACGTTCATCAGTCCAAGGCCAAGATGTTATTGGTGTAGGT
TTCTCAAAGCTCGATCCTGTTGGAGCTGATACAGAGTTGCTAGATTCTGCATCCTCCACTACCGACGAAGCTTCAACGACAAAGTTCACTAGTTCATCGATCTCAAGAGG
CACTACAGGACATGTCGAGTGGGAACTCGAATACATAAAGAACATACTCTGCAATGTGGAGTTGATGTTTAACGACTACGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGAACCAACACAGCTCTGTTGGCAGCAAGTTATCTGACCAATACTTTTTCTTCTAGATTGAAGAATGTTGCAGTAATCGGATTGATGCTAACGAAGGCCAGTCG
CTTAAAGTTCGACATCCGAGTCCCGTCTCTATTCTTGAACATTCCTTTTCATCTGAAAGCTGTGACTCATCGGATAGTAGTAGCAGATATGGTAGATGATTTTTCTTTAC
CAAGAAGAGATTACTCTTATTTGCATATATACATCACTAAAAAGTATTTCAATTTAACAGGAAACAAGTTACGTTCATCAGTCCAAGGCCAAGATGTTATTGGTGTAGGT
TTCTCAAAGCTCGATCCTGTTGGAGCTGATACAGAGTTGCTAGATTCTGCATCCTCCACTACCGACGAAGCTTCAACGACAAAGTTCACTAGTTCATCGATCTCAAGAGG
CACTACAGGACATGTCGAGTGGGAACTCGAATACATAAAGAACATACTCTGCAATGTGGAGTTGATGTTTAACGACTACGTGTAG
Protein sequenceShow/hide protein sequence
MRGTNTALLAASYLTNTFSSRLKNVAVIGLMLTKASRLKFDIRVPSLFLNIPFHLKAVTHRIVVADMVDDFSLPRRDYSYLHIYITKKYFNLTGNKLRSSVQGQDVIGVG
FSKLDPVGADTELLDSASSTTDEASTTKFTSSSISRGTTGHVEWELEYIKNILCNVELMFNDYV