; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0024678 (gene) of Chayote v1 genome

Gene IDSed0024678
OrganismSechium edule (Chayote v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 43
Genome locationLG03:7472464..7473279
RNA-Seq ExpressionSed0024678
SyntenySed0024678
Gene Ontology termsNA
InterPro domainsIPR040274 - CLAVATA3/ESR (CLE)-related protein 27/43


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063931.1 putative Clavata3/esr-related 43 [Cucumis melo var. makuwa]7.0e-1755.32Show/hide
Query:  GATPPRRRRFLSSYLIVILFMWVIFCNHHHQAAAAARPFPENKNPHQKTHLGGGGGGGSKGKLLRKYFNGRSFDSKEFEQNKRTVPSCPDPLHN
        GATP RRRR LS + I++ F+WV+  N    A+A ARP  E++NP         G  GSK     KYFNGRS  S+EFE+NKRTVPSCPDPLHN
Subjt:  GATPPRRRRFLSSYLIVILFMWVIFCNHHHQAAAAARPFPENKNPHQKTHLGGGGGGGSKGKLLRKYFNGRSFDSKEFEQNKRTVPSCPDPLHN

KAG6579278.1 CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia]2.3e-2866.67Show/hide
Query:  GGATPP-RRRRFLSSYLIVILFMWVIFCNHHHQAAAAARPFPENKNPHQKTHLGGGGGGGSKGKLLRKYFNGRSFDSKEFEQNKRTVPSCPDPLHN
        GGATPP RRRRFLSS+ ++I F+WV+FC+H HQA A ARPFP N+ P Q       GG GSK KLLR YFNGRSF S+ F++ KRTVPSCPDPLHN
Subjt:  GGATPP-RRRRFLSSYLIVILFMWVIFCNHHHQAAAAARPFPENKNPHQKTHLGGGGGGGSKGKLLRKYFNGRSFDSKEFEQNKRTVPSCPDPLHN

KAG6601785.1 CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2262.89Show/hide
Query:  MYGGATPPRRRRFLSSYLIVILFMWVIFCNHHHQAAAAARPFPENKNPHQKTHLGGGGGGGSKGKLLRKYFNGRSFDSKEFEQNKRTVPSCPDPLHN
        M GG TP R+RRFLS+ L++ LF+WV+FC  H   A +AR FPEN  P ++TH+  GGGGGSK KLLRKYFNG     + FE NKRTVPSCPDPLHN
Subjt:  MYGGATPPRRRRFLSSYLIVILFMWVIFCNHHHQAAAAARPFPENKNPHQKTHLGGGGGGGSKGKLLRKYFNGRSFDSKEFEQNKRTVPSCPDPLHN

KAG7016789.1 hypothetical protein SDJN02_21899, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-2866.67Show/hide
Query:  GGATPP-RRRRFLSSYLIVILFMWVIFCNHHHQAAAAARPFPENKNPHQKTHLGGGGGGGSKGKLLRKYFNGRSFDSKEFEQNKRTVPSCPDPLHN
        GGATPP RRRRFLSS+ ++I F+WV+FC+H HQA A ARPFP N+ P Q       GG GSK KLLR YFNGRSF S+ F++ KRTVPSCPDPLHN
Subjt:  GGATPP-RRRRFLSSYLIVILFMWVIFCNHHHQAAAAARPFPENKNPHQKTHLGGGGGGGSKGKLLRKYFNGRSFDSKEFEQNKRTVPSCPDPLHN

KGN52083.1 hypothetical protein Csa_008231 [Cucumis sativus]1.5e-0641.3Show/hide
Query:  SSYLIVILFMWV----IFCNHHHQAAAAARPFPENKNPH-QKTHLGGGGGGGSKGKLLRKYFNGRSFD----SKEFEQNKRTVPSCPDPLHN
        S++ I+IL +WV    + C+   +A+    P P    PH     L G     +K  LL+KYFNGR+FD     + FE +KR +PSCPDPLHN
Subjt:  SSYLIVILFMWV----IFCNHHHQAAAAARPFPENKNPH-QKTHLGGGGGGGSKGKLLRKYFNGRSFD----SKEFEQNKRTVPSCPDPLHN

TrEMBL top hitse value%identityAlignment
A0A0A0KR66 Uncharacterized protein7.1e-0741.3Show/hide
Query:  SSYLIVILFMWV----IFCNHHHQAAAAARPFPENKNPH-QKTHLGGGGGGGSKGKLLRKYFNGRSFD----SKEFEQNKRTVPSCPDPLHN
        S++ I+IL +WV    + C+   +A+    P P    PH     L G     +K  LL+KYFNGR+FD     + FE +KR +PSCPDPLHN
Subjt:  SSYLIVILFMWV----IFCNHHHQAAAAARPFPENKNPH-QKTHLGGGGGGGSKGKLLRKYFNGRSFD----SKEFEQNKRTVPSCPDPLHN

A0A2C9VNI0 Uncharacterized protein6.0e-0648.28Show/hide
Query:  YLIVILFMWVIFCNHHHQAAAAARPFPENKNPHQKTH--LGGGGGGGSKGKLLRKYFNGR--SFDS--KEFEQNKRTVPSCPDPLHN
        +LI +L +WV  C+     A A R FP+N  P +  H  +       +K  LLRK+FNGR  SF+S  K FE+NKR VPSCPDPLHN
Subjt:  YLIVILFMWVIFCNHHHQAAAAARPFPENKNPHQKTH--LGGGGGGGSKGKLLRKYFNGR--SFDS--KEFEQNKRTVPSCPDPLHN

A0A2U1QJK5 Uncharacterized protein3.9e-0539.56Show/hide
Query:  RRRRFLSSYLIV--ILFMWVIFCNHHHQAAAAARPFPENKNPHQKTHLGGGGGGGSKGKLLRKYFNGRSFDSKEFEQNKRTVPSCPDPLHN
        +R+ +L + LI+  +L +W++  +H    A    P  +   P Q +          K KL RKYF+GR F  K F++NKR VPSCPDPLHN
Subjt:  RRRRFLSSYLIV--ILFMWVIFCNHHHQAAAAARPFPENKNPHQKTHLGGGGGGGSKGKLLRKYFNGRSFDSKEFEQNKRTVPSCPDPLHN

A0A5A7VDX3 Putative Clavata3/esr-related 433.4e-1755.32Show/hide
Query:  GATPPRRRRFLSSYLIVILFMWVIFCNHHHQAAAAARPFPENKNPHQKTHLGGGGGGGSKGKLLRKYFNGRSFDSKEFEQNKRTVPSCPDPLHN
        GATP RRRR LS + I++ F+WV+  N    A+A ARP  E++NP         G  GSK     KYFNGRS  S+EFE+NKRTVPSCPDPLHN
Subjt:  GATPPRRRRFLSSYLIVILFMWVIFCNHHHQAAAAARPFPENKNPHQKTHLGGGGGGGSKGKLLRKYFNGRSFDSKEFEQNKRTVPSCPDPLHN

A0A5N6Q3Y4 Uncharacterized protein1.0e-0540.66Show/hide
Query:  RRRRFLSSYLIV--ILFMWVIFCNHHHQAAAAARPFPENKNPHQKTHLGGGGGGGSKGKLLRKYFNGRSFDSKEFEQNKRTVPSCPDPLHN
        RR+ +L + LI+  +L +WV+  +H    +A   P P    P Q +          + +L RK+FNGR F  K F++NKR VPSCPDPLHN
Subjt:  RRRRFLSSYLIV--ILFMWVIFCNHHHQAAAAARPFPENKNPHQKTHLGGGGGGGSKGKLLRKYFNGRSFDSKEFEQNKRTVPSCPDPLHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G25905.1 CLAVATA3/ESR-RELATED 271.9e-0431.91Show/hide
Query:  RRRFLSSYLIVILFMWVIFCNHHHQAAAAARPFPENKNPHQKTHLGGGGGGGSKGKLLRKYFNG------RSFDSKEFEQNKRTVPSCPDPLHN
        R    ++ L+VIL  +++     +    A R FPE              G   +  L++KYF         SF  K   ++KR VPSCPDPLHN
Subjt:  RRRFLSSYLIVILFMWVIFCNHHHQAAAAARPFPENKNPHQKTHLGGGGGGGSKGKLLRKYFNG------RSFDSKEFEQNKRTVPSCPDPLHN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGGCGGCGCAACTCCTCCACGGCGGCGGAGATTTCTCTCTTCCTACTTGATCGTTATTTTGTTCATGTGGGTCATCTTCTGCAACCACCACCACCAAGCCGCCGC
CGCCGCCAGACCCTTCCCGGAAAACAAAAATCCACATCAGAAAACCCATTTGGGCGGCGGCGGCGGCGGGGGAAGCAAGGGAAAGCTGCTCCGGAAGTATTTCAATGGAA
GGAGTTTCGATTCGAAAGAGTTTGAACAGAACAAACGAACCGTCCCGAGCTGCCCGGATCCCCTCCACAACTAA
mRNA sequenceShow/hide mRNA sequence
CTGTCTTCCATTTCGTTTTCCCCCATTTTGTGGTAACTTCACCGGCAATGTACGGCGGCGCAACTCCTCCACGGCGGCGGAGATTTCTCTCTTCCTACTTGATCGTTATT
TTGTTCATGTGGGTCATCTTCTGCAACCACCACCACCAAGCCGCCGCCGCCGCCAGACCCTTCCCGGAAAACAAAAATCCACATCAGAAAACCCATTTGGGCGGCGGCGG
CGGCGGGGGAAGCAAGGGAAAGCTGCTCCGGAAGTATTTCAATGGAAGGAGTTTCGATTCGAAAGAGTTTGAACAGAACAAACGAACCGTCCCGAGCTGCCCGGATCCCC
TCCACAACTAATGTACCCAAAATACCCCGTCATCGGAAAAAATCCGGGGGTATTTGGGGAATTTAAAGTTAGGTTCAGAAATGGAGGGTTCGTGATTTGTACAGAAAAAG
AAGAAAATCTGAAATACTGCTTTTGGAGGACTTTGGCAGAGGAAGAGAAAGAAGACGAACTAAGAATGGCAGAGATGTGATTTTATTTCCAATCAGAGAATCATCTGTTT
TTTTTTATATATATATATATATATTGTAAAAGAAGATAGAGTGTACGTAATTTTTTTTCTTTTCTTTTTTTTGTAGGAGTAATTTTGTTTGTCGTCTGCTCTGTCATGGA
AAAAAGAAAAGGGGAAGCCTTTTTGGGTTGCTCAGTTTGTGTGTTGAACTTTGGTTTTGATGTTTCCCAGCTGCTATAATCTCTGTTCTTTTCTTCTATGCTTTTTTTTC
TTGTGCTTGAATAATTTTGGGAGGACTTTCTCAGATATCATTCAAC
Protein sequenceShow/hide protein sequence
MYGGATPPRRRRFLSSYLIVILFMWVIFCNHHHQAAAAARPFPENKNPHQKTHLGGGGGGGSKGKLLRKYFNGRSFDSKEFEQNKRTVPSCPDPLHN