; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0024686 (gene) of Chayote v1 genome

Gene IDSed0024686
OrganismSechium edule (Chayote v1)
DescriptionRING-type domain-containing protein
Genome locationLG02:50980671..50984247
RNA-Seq ExpressionSed0024686
SyntenySed0024686
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7028749.1 hypothetical protein SDJN02_09930, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-9265.37Show/hide
Query:  SPFLPPPLCRRKSPPSPRSIAPLRPPSAVPSYARFDLLYCFLHATVVLLQILLVFSDFSPLISVLCIKKAIGMSFY----LRDWSARVVER-TLMDFDLN
        SP L P L   K    PRSI PL P  AVPS AR                                  KA+GMSF     L++WSARVVER T+MDFDLN
Subjt:  SPFLPPPLCRRKSPPSPRSIAPLRPPSAVPSYARFDLLYCFLHATVVLLQILLVFSDFSPLISVLCIKKAIGMSFY----LRDWSARVVER-TLMDFDLN

Query:  CPPPDECHVPTGPHEGAAQYYNHYQGQTMNNPDFVDEDIAIISPRKFAEARKNLRRN-YERNCGVATRRNDNTEIYGTLSDLLHVTSWPPFTIWPSLSIS
        CPPPDEC  PTGPH+ A QYYNHYQGQ M+NP+FVDEDIAIISPRKFAEARKN RRN +E +CGVA RRN      G  SDL   TS  PFTIWP L+  
Subjt:  CPPPDECHVPTGPHEGAAQYYNHYQGQTMNNPDFVDEDIAIISPRKFAEARKNLRRN-YERNCGVATRRNDNTEIYGTLSDLLHVTSWPPFTIWPSLSIS

Query:  NSNVPIQEQRNHNLDLCLSCESSSRATKATIDTGIPCALAQ-SSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCIETAIATQHKCPICRRKLRKR
        N NV IQEQ  HNLDLCLSCESSS+ATKATIDT IP ALAQ SS++PP AA  LRCAICIE LV+ETTTKCGHVFC+SCIETAIATQH+CPICRRKLRKR
Subjt:  NSNVPIQEQRNHNLDLCLSCESSSRATKATIDTGIPCALAQ-SSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCIETAIATQHKCPICRRKLRKR

Query:  DIIRIYLPF
        DIIRIYLPF
Subjt:  DIIRIYLPF

XP_022147116.1 E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like [Momordica charantia]2.4e-9376.96Show/hide
Query:  LRDWSARVVE-RTLMDFDLNCPPPDECHVPTGPHEGAAQYYNHYQGQTMNNPDFVDEDIAIISPRKFAEARKNLRRN-YERNCGVATRRNDNTEIYGTLS
        L +W+ARVVE RT+MDFDLNCPPPDEC  PTGP E AAQ++NH+Q Q  +NPD VDEDIAIISPRKFAEARKN RRN ++ +CGVA R N NTE+YG LS
Subjt:  LRDWSARVVE-RTLMDFDLNCPPPDECHVPTGPHEGAAQYYNHYQGQTMNNPDFVDEDIAIISPRKFAEARKNLRRN-YERNCGVATRRNDNTEIYGTLS

Query:  DLLHVTSWPPFTIWPSLSISNSNVPIQEQRNHNLDLCLSCESSSRATKATIDTGIPCALAQSSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCIE
        D   VTSWPPFTIWP L+I N+NV I+EQ  HNLDLCLS ESSSRA     DT IP ALAQSS+I PPAAPSLRCAICIEPLV+ETTTKCGHVFCR+CIE
Subjt:  DLLHVTSWPPFTIWPSLSISNSNVPIQEQRNHNLDLCLSCESSSRATKATIDTGIPCALAQSSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCIE

Query:  TAIATQHKCPICRRKLRKRDIIRIYLPFST
        TAIATQH+CPICRRKLRKRDIIRIYLPFS+
Subjt:  TAIATQHKCPICRRKLRKRDIIRIYLPFST

XP_022935007.1 uncharacterized protein LOC111441975 [Cucurbita moschata]9.4e-9077.29Show/hide
Query:  LRDWSARVVER-TLMDFDLNCPPPDECHVPTGPHEGAAQYYNHYQGQTMNNPDFVDEDIAIISPRKFAEARKNLRRN-YERNCGVATRRNDNTEIYGTLS
        L++WSARVVER T+MDFDLNCPPPDEC  PTGPH+ A QYYNHYQGQ M+NP+FVDEDIAIISPRKFAEARKN RRN +E +CGVA RRN      G  S
Subjt:  LRDWSARVVER-TLMDFDLNCPPPDECHVPTGPHEGAAQYYNHYQGQTMNNPDFVDEDIAIISPRKFAEARKNLRRN-YERNCGVATRRNDNTEIYGTLS

Query:  DLLHVTSWPPFTIWPSLSISNSNVPIQEQRNHNLDLCLSCESSSRATKATIDTGIPCALAQ-SSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCI
        DL   TS  PFTIWP L+  N NV IQEQ  HNLDLCLSCESSS+ATKATIDT IP ALAQ SS++PP AA  LRCAICIE LV+ETTTKCGHVFC+SCI
Subjt:  DLLHVTSWPPFTIWPSLSISNSNVPIQEQRNHNLDLCLSCESSSRATKATIDTGIPCALAQ-SSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCI

Query:  ETAIATQHKCPICRRKLRKRDIIRIYLPF
        ETAIATQH+CPICRRKLRKRDIIRIYLPF
Subjt:  ETAIATQHKCPICRRKLRKRDIIRIYLPF

XP_022974776.1 E3 ubiquitin-protein ligase BRE1-like [Cucurbita maxima]1.0e-8875.98Show/hide
Query:  LRDWSARVVER-TLMDFDLNCPPPDECHVPTGPHEGAAQYYNHYQGQTMNNPDFVDEDIAIISPRKFAEARKNLRRN-YERNCGVATRRNDNTEIYGTLS
        L++WSARVVER T+MDFDLN PPPDEC  PTGPH+ A QYYNHYQGQ M+NP+FVDEDIAIISPRKFAEARKN RRN +E +CGVA RRN      G  S
Subjt:  LRDWSARVVER-TLMDFDLNCPPPDECHVPTGPHEGAAQYYNHYQGQTMNNPDFVDEDIAIISPRKFAEARKNLRRN-YERNCGVATRRNDNTEIYGTLS

Query:  DLLHVTSWPPFTIWPSLSISNSNVPIQEQRNHNLDLCLSCESSSRATKATIDTGIPCALAQ-SSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCI
        DL   +S  PFTIWP+L+ S +NV IQEQ  HNLDLCLSCESSS+ATKATIDTGIP ALAQ SS++PP A+  LRCAIC+E LV+ETTTKCGHVFC+SCI
Subjt:  DLLHVTSWPPFTIWPSLSISNSNVPIQEQRNHNLDLCLSCESSSRATKATIDTGIPCALAQ-SSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCI

Query:  ETAIATQHKCPICRRKLRKRDIIRIYLPF
        ETAIATQH+CPICRRKLRKRDIIRIYLPF
Subjt:  ETAIATQHKCPICRRKLRKRDIIRIYLPF

XP_023540616.1 uncharacterized protein LOC111800927 [Cucurbita pepo subsp. pepo]5.9e-9269.09Show/hide
Query:  FLHATVVLLQILL------VFSDFSPLISVLCIKKAIGMSFY----LRDWSARVVER-TLMDFDLNCPPPDECHVPTGPHEGAAQYYNHYQGQTMNNPDF
        FL  T+V++Q  L      ++ D S ++ +    KA+GMSF     L++WSARVVER T+MDFDLNCPPPDEC  PTGPH+ A QYYNHYQGQ M+NP+F
Subjt:  FLHATVVLLQILL------VFSDFSPLISVLCIKKAIGMSFY----LRDWSARVVER-TLMDFDLNCPPPDECHVPTGPHEGAAQYYNHYQGQTMNNPDF

Query:  VDEDIAIISPRKFAEARKNLRRN-YERNCGVATRRNDNTEIYGTLSDLLHVTSWPPFTIWPSLSISNSNVPIQEQRNHNLDLCLSCESSSRATKATIDTG
        VDEDIAIISPRKFAEARKN RRN +E +CGVA RRN      G  SDL   TS  PFTIWP L+ + +NV IQEQ  HNLDLCLSCESSS+ATKATIDT 
Subjt:  VDEDIAIISPRKFAEARKNLRRN-YERNCGVATRRNDNTEIYGTLSDLLHVTSWPPFTIWPSLSISNSNVPIQEQRNHNLDLCLSCESSSRATKATIDTG

Query:  IPCALAQ-SSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCIETAIATQHKCPICRRKLRKRDIIRIYLPF
        IP ALAQ SS++PP AA  LRCAICIE LV+ETTTKCGHVFC+SCIETAIATQH+CPICRRKLRKRDIIRIYLPF
Subjt:  IPCALAQ-SSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCIETAIATQHKCPICRRKLRKRDIIRIYLPF

TrEMBL top hitse value%identityAlignment
A0A1S3AW86 uncharacterized protein LOC1034834701.4e-8674.03Show/hide
Query:  LRDWSARVVE-RTLMDFDLNCPPPDECHVPTGPHEGAAQYYNHYQGQTMNNPDFVDEDIAIISPRKFAEARKNLRRN-YERNCGVATRRNDNTEIYGTLS
        L DWSARV+E RT++DFDLNCPPPDEC  PTGP + AAQYYNHYQGQ     D +DEDIAIISPRKFAEARKN RRN +E   G   RRN NTE+YG LS
Subjt:  LRDWSARVVE-RTLMDFDLNCPPPDECHVPTGPHEGAAQYYNHYQGQTMNNPDFVDEDIAIISPRKFAEARKNLRRN-YERNCGVATRRNDNTEIYGTLS

Query:  DLLHVTSWPPFTIWPSLSISNSNVPIQEQRN-HNLDLCLSCESSSRATKATIDTGIPCALAQSSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCI
        D   VT+WPPFTIW  L+ISN NV +QEQ+  HNLDL LSCESSSRATKA  DT IP  LA SS+I PP   +LRCAICIEPLV+ETTTKCGHVFCR+CI
Subjt:  DLLHVTSWPPFTIWPSLSISNSNVPIQEQRN-HNLDLCLSCESSSRATKATIDTGIPCALAQSSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCI

Query:  ETAIATQHKCPICRRKLRKRDIIRIYLPFST
        ETAIATQH+CPICRRKLRKRDIIRIYLPF++
Subjt:  ETAIATQHKCPICRRKLRKRDIIRIYLPFST

A0A5A7U158 E3 ubiquitin-protein ligase RNF4-like1.4e-8674.03Show/hide
Query:  LRDWSARVVE-RTLMDFDLNCPPPDECHVPTGPHEGAAQYYNHYQGQTMNNPDFVDEDIAIISPRKFAEARKNLRRN-YERNCGVATRRNDNTEIYGTLS
        L DWSARV+E RT++DFDLNCPPPDEC  PTGP + AAQYYNHYQGQ     D +DEDIAIISPRKFAEARKN RRN +E   G   RRN NTE+YG LS
Subjt:  LRDWSARVVE-RTLMDFDLNCPPPDECHVPTGPHEGAAQYYNHYQGQTMNNPDFVDEDIAIISPRKFAEARKNLRRN-YERNCGVATRRNDNTEIYGTLS

Query:  DLLHVTSWPPFTIWPSLSISNSNVPIQEQRN-HNLDLCLSCESSSRATKATIDTGIPCALAQSSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCI
        D   VT+WPPFTIW  L+ISN NV +QEQ+  HNLDL LSCESSSRATKA  DT IP  LA SS+I PP   +LRCAICIEPLV+ETTTKCGHVFCR+CI
Subjt:  DLLHVTSWPPFTIWPSLSISNSNVPIQEQRN-HNLDLCLSCESSSRATKATIDTGIPCALAQSSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCI

Query:  ETAIATQHKCPICRRKLRKRDIIRIYLPFST
        ETAIATQH+CPICRRKLRKRDIIRIYLPF++
Subjt:  ETAIATQHKCPICRRKLRKRDIIRIYLPFST

A0A6J1D1D9 E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like1.2e-9376.96Show/hide
Query:  LRDWSARVVE-RTLMDFDLNCPPPDECHVPTGPHEGAAQYYNHYQGQTMNNPDFVDEDIAIISPRKFAEARKNLRRN-YERNCGVATRRNDNTEIYGTLS
        L +W+ARVVE RT+MDFDLNCPPPDEC  PTGP E AAQ++NH+Q Q  +NPD VDEDIAIISPRKFAEARKN RRN ++ +CGVA R N NTE+YG LS
Subjt:  LRDWSARVVE-RTLMDFDLNCPPPDECHVPTGPHEGAAQYYNHYQGQTMNNPDFVDEDIAIISPRKFAEARKNLRRN-YERNCGVATRRNDNTEIYGTLS

Query:  DLLHVTSWPPFTIWPSLSISNSNVPIQEQRNHNLDLCLSCESSSRATKATIDTGIPCALAQSSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCIE
        D   VTSWPPFTIWP L+I N+NV I+EQ  HNLDLCLS ESSSRA     DT IP ALAQSS+I PPAAPSLRCAICIEPLV+ETTTKCGHVFCR+CIE
Subjt:  DLLHVTSWPPFTIWPSLSISNSNVPIQEQRNHNLDLCLSCESSSRATKATIDTGIPCALAQSSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCIE

Query:  TAIATQHKCPICRRKLRKRDIIRIYLPFST
        TAIATQH+CPICRRKLRKRDIIRIYLPFS+
Subjt:  TAIATQHKCPICRRKLRKRDIIRIYLPFST

A0A6J1F4D6 uncharacterized protein LOC1114419754.6e-9077.29Show/hide
Query:  LRDWSARVVER-TLMDFDLNCPPPDECHVPTGPHEGAAQYYNHYQGQTMNNPDFVDEDIAIISPRKFAEARKNLRRN-YERNCGVATRRNDNTEIYGTLS
        L++WSARVVER T+MDFDLNCPPPDEC  PTGPH+ A QYYNHYQGQ M+NP+FVDEDIAIISPRKFAEARKN RRN +E +CGVA RRN      G  S
Subjt:  LRDWSARVVER-TLMDFDLNCPPPDECHVPTGPHEGAAQYYNHYQGQTMNNPDFVDEDIAIISPRKFAEARKNLRRN-YERNCGVATRRNDNTEIYGTLS

Query:  DLLHVTSWPPFTIWPSLSISNSNVPIQEQRNHNLDLCLSCESSSRATKATIDTGIPCALAQ-SSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCI
        DL   TS  PFTIWP L+  N NV IQEQ  HNLDLCLSCESSS+ATKATIDT IP ALAQ SS++PP AA  LRCAICIE LV+ETTTKCGHVFC+SCI
Subjt:  DLLHVTSWPPFTIWPSLSISNSNVPIQEQRNHNLDLCLSCESSSRATKATIDTGIPCALAQ-SSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCI

Query:  ETAIATQHKCPICRRKLRKRDIIRIYLPF
        ETAIATQH+CPICRRKLRKRDIIRIYLPF
Subjt:  ETAIATQHKCPICRRKLRKRDIIRIYLPF

A0A6J1ICB2 E3 ubiquitin-protein ligase BRE1-like5.0e-8975.98Show/hide
Query:  LRDWSARVVER-TLMDFDLNCPPPDECHVPTGPHEGAAQYYNHYQGQTMNNPDFVDEDIAIISPRKFAEARKNLRRN-YERNCGVATRRNDNTEIYGTLS
        L++WSARVVER T+MDFDLN PPPDEC  PTGPH+ A QYYNHYQGQ M+NP+FVDEDIAIISPRKFAEARKN RRN +E +CGVA RRN      G  S
Subjt:  LRDWSARVVER-TLMDFDLNCPPPDECHVPTGPHEGAAQYYNHYQGQTMNNPDFVDEDIAIISPRKFAEARKNLRRN-YERNCGVATRRNDNTEIYGTLS

Query:  DLLHVTSWPPFTIWPSLSISNSNVPIQEQRNHNLDLCLSCESSSRATKATIDTGIPCALAQ-SSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCI
        DL   +S  PFTIWP+L+ S +NV IQEQ  HNLDLCLSCESSS+ATKATIDTGIP ALAQ SS++PP A+  LRCAIC+E LV+ETTTKCGHVFC+SCI
Subjt:  DLLHVTSWPPFTIWPSLSISNSNVPIQEQRNHNLDLCLSCESSSRATKATIDTGIPCALAQ-SSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCI

Query:  ETAIATQHKCPICRRKLRKRDIIRIYLPF
        ETAIATQH+CPICRRKLRKRDIIRIYLPF
Subjt:  ETAIATQHKCPICRRKLRKRDIIRIYLPF

SwissProt top hitse value%identityAlignment
P87176 E3 ubiquitin-protein ligase complex slx8-rfp subunit slx82.6e-0540.38Show/hide
Query:  RCAICIEPLVDETTTKCGHVFCRSCIETAIAT---QHKCPICRRKLRKRDII
        +C IC++   + + T CGH+FC  CI +A+ T     KCP+CRRK+    +I
Subjt:  RCAICIEPLVDETTTKCGHVFCRSCIETAIAT---QHKCPICRRKLRKRDII

Q00940 Peroxisome biogenesis factor 101.1e-0532.81Show/hide
Query:  LAQSSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCIETAIATQHKCPICRRKLRKRDII
        LA    +P     S  C +C+ P+ D +  +CGHVFC  C+   +  + +CP+CR K+R+  ++
Subjt:  LAQSSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCIETAIATQHKCPICRRKLRKRDII

Q3UWZ0 Tripartite motif-containing protein 751.1e-0543.14Show/hide
Query:  RCAICIEPLVDETTTKCGHVFCRSCIETAIATQH---KCPICRRKLRKRDI
        +C IC++ L D  T +CGH FCRSCI+   A Q     CP+CR + + R++
Subjt:  RCAICIEPLVDETTTKCGHVFCRSCIETAIATQH---KCPICRRKLRKRDI

Q95KF1 E3 ubiquitin-protein ligase RNF1252.0e-0540Show/hide
Query:  SSRATKATIDTGIPCALAQSSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCIETAIA-TQHKCPICRRKL
        SS + K+   +  P AL +  + P     S  CA+C+E L     T+CGHVFCRSCI T++   +  CP CR  L
Subjt:  SSRATKATIDTGIPCALAQSSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCIETAIA-TQHKCPICRRKL

Q9D9R0 E3 ubiquitin-protein ligase RNF1252.3e-0640.79Show/hide
Query:  SSRATKATIDTGIPCALAQSSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCIETAIATQHK--CPICRRKL
        SS ++K+   +  P  L +S +   P   S  C++C+E L     T+CGHVFCRSCI T+I   +K  CP CR  L
Subjt:  SSRATKATIDTGIPCALAQSSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCIETAIATQHK--CPICRRKL

Arabidopsis top hitse value%identityAlignment
AT3G07200.1 RING/U-box superfamily protein8.1e-1548.39Show/hide
Query:  PPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCIETAIATQHKCPICRRKLRKRDIIRIYLP
        PP   P   C IC+ P   E +TKCGH+FC+ CI+ A++ Q KCP CR+K+  +D+IR++LP
Subjt:  PPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCIETAIATQHKCPICRRKLRKRDIIRIYLP

AT3G07200.2 RING/U-box superfamily protein8.1e-1548.39Show/hide
Query:  PPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCIETAIATQHKCPICRRKLRKRDIIRIYLP
        PP   P   C IC+ P   E +TKCGH+FC+ CI+ A++ Q KCP CR+K+  +D+IR++LP
Subjt:  PPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCIETAIATQHKCPICRRKLRKRDIIRIYLP

AT5G48655.1 RING/U-box superfamily protein1.7e-1728.23Show/hide
Query:  DLNCPPPDECHVPTGPHEGAAQYYNHYQGQTMNNPDFVDEDIAIISPRKFAEARKNLRRNYERNCGVATRRNDNTEIYGTLSDLLHVTSWPPFTIWPSLS
        DLN  P D+                     TM + D +++D+   S   FAEA+   R    R   V      + E  GT       T +P         
Subjt:  DLNCPPPDECHVPTGPHEGAAQYYNHYQGQTMNNPDFVDEDIAIISPRKFAEARKNLRRNYERNCGVATRRNDNTEIYGTLSDLLHVTSWPPFTIWPSLS

Query:  ISNSNVPIQEQRNHNLDLCLSCESSSRATKATIDTGIPCALAQSSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCIETAIATQHKCPICRRKLRK
           +N+  + +R  + +  + CE +S   +  + + +  + A +   PPP  P   C IC+ P  +E +TKCGH+FC+ CI+ AI+ Q KCP CR+K+  
Subjt:  ISNSNVPIQEQRNHNLDLCLSCESSSRATKATIDTGIPCALAQSSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCIETAIATQHKCPICRRKLRK

Query:  RDIIRIYLP
        +++IR++LP
Subjt:  RDIIRIYLP

AT5G48655.2 RING/U-box superfamily protein1.7e-1728.23Show/hide
Query:  DLNCPPPDECHVPTGPHEGAAQYYNHYQGQTMNNPDFVDEDIAIISPRKFAEARKNLRRNYERNCGVATRRNDNTEIYGTLSDLLHVTSWPPFTIWPSLS
        DLN  P D+                     TM + D +++D+   S   FAEA+   R    R   V      + E  GT       T +P         
Subjt:  DLNCPPPDECHVPTGPHEGAAQYYNHYQGQTMNNPDFVDEDIAIISPRKFAEARKNLRRNYERNCGVATRRNDNTEIYGTLSDLLHVTSWPPFTIWPSLS

Query:  ISNSNVPIQEQRNHNLDLCLSCESSSRATKATIDTGIPCALAQSSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCIETAIATQHKCPICRRKLRK
           +N+  + +R  + +  + CE +S   +  + + +  + A +   PPP  P   C IC+ P  +E +TKCGH+FC+ CI+ AI+ Q KCP CR+K+  
Subjt:  ISNSNVPIQEQRNHNLDLCLSCESSSRATKATIDTGIPCALAQSSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCIETAIATQHKCPICRRKLRK

Query:  RDIIRIYLP
        +++IR++LP
Subjt:  RDIIRIYLP

AT5G48655.3 RING/U-box superfamily protein1.7e-1728.23Show/hide
Query:  DLNCPPPDECHVPTGPHEGAAQYYNHYQGQTMNNPDFVDEDIAIISPRKFAEARKNLRRNYERNCGVATRRNDNTEIYGTLSDLLHVTSWPPFTIWPSLS
        DLN  P D+                     TM + D +++D+   S   FAEA+   R    R   V      + E  GT       T +P         
Subjt:  DLNCPPPDECHVPTGPHEGAAQYYNHYQGQTMNNPDFVDEDIAIISPRKFAEARKNLRRNYERNCGVATRRNDNTEIYGTLSDLLHVTSWPPFTIWPSLS

Query:  ISNSNVPIQEQRNHNLDLCLSCESSSRATKATIDTGIPCALAQSSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCIETAIATQHKCPICRRKLRK
           +N+  + +R  + +  + CE +S   +  + + +  + A +   PPP  P   C IC+ P  +E +TKCGH+FC+ CI+ AI+ Q KCP CR+K+  
Subjt:  ISNSNVPIQEQRNHNLDLCLSCESSSRATKATIDTGIPCALAQSSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCIETAIATQHKCPICRRKLRK

Query:  RDIIRIYLP
        +++IR++LP
Subjt:  RDIIRIYLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCCAAGATTGCTTTCACATCGATTGCCGCCCCATCCGTCTCTTCCCTTCTCTCCCCTTTTTCCCTTTCCCCATTTCTTCCTCCGCCGCTTTGCCGCCGCAAATC
TCCTCCGTCTCCTCGTTCGATCGCCCCGCTCCGGCCGCCGTCCGCCGTCCCGTCTTACGCCAGGTTCGATCTCCTTTACTGTTTCCTTCATGCTACTGTTGTATTGCTTC
AAATCTTGCTTGTTTTCTCTGATTTCTCGCCTCTAATTTCCGTTTTATGTATAAAGAAGGCTATCGGAATGAGCTTCTATCTACGTGACTGGAGTGCAAGAGTTGTTGAG
AGAACATTAATGGACTTCGACCTAAATTGTCCGCCTCCAGATGAGTGCCACGTTCCAACTGGTCCTCACGAGGGAGCAGCACAGTACTACAATCATTACCAAGGACAAAC
TATGAACAATCCCGACTTTGTCGATGAGGACATTGCCATAATCTCCCCTAGGAAATTTGCTGAAGCCAGGAAGAATTTACGAAGAAACTATGAAAGGAACTGTGGTGTAG
CCACTAGACGTAACGACAACACAGAAATTTATGGTACTCTCTCAGACTTATTGCATGTAACAAGCTGGCCTCCTTTTACAATTTGGCCGTCGCTTTCAATTAGCAATAGC
AACGTACCCATACAGGAGCAAAGGAATCACAACTTGGACCTTTGCTTAAGCTGTGAAAGCAGTAGTAGGGCCACTAAGGCAACAATCGACACTGGCATTCCTTGTGCACT
CGCACAAAGTAGTAACATCCCACCTCCAGCAGCACCGAGTTTGCGGTGTGCGATCTGCATAGAACCATTGGTCGACGAAACAACAACCAAATGTGGGCATGTTTTCTGCA
GGAGCTGCATCGAAACAGCCATAGCTACCCAGCACAAATGTCCCATTTGTCGGCGTAAGCTTAGAAAACGAGATATTATCCGGATTTACCTTCCCTTTTCAACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCCAAGATTGCTTTCACATCGATTGCCGCCCCATCCGTCTCTTCCCTTCTCTCCCCTTTTTCCCTTTCCCCATTTCTTCCTCCGCCGCTTTGCCGCCGCAAATC
TCCTCCGTCTCCTCGTTCGATCGCCCCGCTCCGGCCGCCGTCCGCCGTCCCGTCTTACGCCAGGTTCGATCTCCTTTACTGTTTCCTTCATGCTACTGTTGTATTGCTTC
AAATCTTGCTTGTTTTCTCTGATTTCTCGCCTCTAATTTCCGTTTTATGTATAAAGAAGGCTATCGGAATGAGCTTCTATCTACGTGACTGGAGTGCAAGAGTTGTTGAG
AGAACATTAATGGACTTCGACCTAAATTGTCCGCCTCCAGATGAGTGCCACGTTCCAACTGGTCCTCACGAGGGAGCAGCACAGTACTACAATCATTACCAAGGACAAAC
TATGAACAATCCCGACTTTGTCGATGAGGACATTGCCATAATCTCCCCTAGGAAATTTGCTGAAGCCAGGAAGAATTTACGAAGAAACTATGAAAGGAACTGTGGTGTAG
CCACTAGACGTAACGACAACACAGAAATTTATGGTACTCTCTCAGACTTATTGCATGTAACAAGCTGGCCTCCTTTTACAATTTGGCCGTCGCTTTCAATTAGCAATAGC
AACGTACCCATACAGGAGCAAAGGAATCACAACTTGGACCTTTGCTTAAGCTGTGAAAGCAGTAGTAGGGCCACTAAGGCAACAATCGACACTGGCATTCCTTGTGCACT
CGCACAAAGTAGTAACATCCCACCTCCAGCAGCACCGAGTTTGCGGTGTGCGATCTGCATAGAACCATTGGTCGACGAAACAACAACCAAATGTGGGCATGTTTTCTGCA
GGAGCTGCATCGAAACAGCCATAGCTACCCAGCACAAATGTCCCATTTGTCGGCGTAAGCTTAGAAAACGAGATATTATCCGGATTTACCTTCCCTTTTCAACCTAA
Protein sequenceShow/hide protein sequence
MEAKIAFTSIAAPSVSSLLSPFSLSPFLPPPLCRRKSPPSPRSIAPLRPPSAVPSYARFDLLYCFLHATVVLLQILLVFSDFSPLISVLCIKKAIGMSFYLRDWSARVVE
RTLMDFDLNCPPPDECHVPTGPHEGAAQYYNHYQGQTMNNPDFVDEDIAIISPRKFAEARKNLRRNYERNCGVATRRNDNTEIYGTLSDLLHVTSWPPFTIWPSLSISNS
NVPIQEQRNHNLDLCLSCESSSRATKATIDTGIPCALAQSSNIPPPAAPSLRCAICIEPLVDETTTKCGHVFCRSCIETAIATQHKCPICRRKLRKRDIIRIYLPFST