| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0043391.1 pol protein [Cucumis melo var. makuwa] | 3.8e-33 | 52.17 | Show/hide |
Query: LLQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRGAIVFGADHPLPWCAREDCVRPRLAVHFSLRERPYGLG-TER
LLQP S+P+WKWE +SMDFI+GLPRT R F+ IWV+VDRLTKSAHF+P + TYT + + L + + RL FS P G TER
Subjt: LLQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRGAIVFGADHPLPWCAREDCVRPRLAVHFSLRERPYGLG-TER
Query: MVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALYGKRYRSPV
+ +LEDMLRAC L+FP S LMEFAYNNS MAPFEALYGK RSPV
Subjt: MVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALYGKRYRSPV
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| KAA0045595.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 8.4e-33 | 51.55 | Show/hide |
Query: LLQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRGAIVFGADHPLPWCAREDCVRPRLAVHFSLRERPYGLG-TER
LLQP S+P+WKWE +SMDFI+GLPRT R F+ IWV+VDRLTKSAHF+P + TYT + + L + + RL FS P G TER
Subjt: LLQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRGAIVFGADHPLPWCAREDCVRPRLAVHFSLRERPYGLG-TER
Query: MVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALYGKRYRSPV
+ +LEDMLRAC L+FP S LMEFAYNNS M PFEALYGK RSPV
Subjt: MVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALYGKRYRSPV
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| KAA0054783.1 pol protein [Cucumis melo var. makuwa] | 7.6e-34 | 47.75 | Show/hide |
Query: LLQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRGAIVFGAD---HPLP---------------WCAREDCVRPRL
LLQP S+P+WKWE +SMDFI+GLPRT R FS IWV+VDRLTKSAHF+P + TYT + + H +P W + + PRL
Subjt: LLQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRGAIVFGAD---HPLP---------------WCAREDCVRPRL
Query: AVHFSLRERPYGLGTERMVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALYGKRYRSPV
+ + G TER+ +LEDMLRAC L+FP S LMEFAYNNS MAPFEALYGK RSPV
Subjt: AVHFSLRERPYGLGTERMVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALYGKRYRSPV
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| KAA0057638.1 pol protein [Cucumis melo var. makuwa] | 3.8e-33 | 48.04 | Show/hide |
Query: LLQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRGAIVFGAD---HPLP---------------WCAREDCVRPRL
LLQP S+P+WKWE +SMDFI+GLPRT R F+ IWV+VDRLTKSAHF+P + TYT + + H +P W + + RL
Subjt: LLQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRGAIVFGAD---HPLP---------------WCAREDCVRPRL
Query: AVHFSLRERPYGLG-TERMVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALYGKRYRSPV
FS+ P G TER+ +LEDMLRAC L+FP S LMEFAYNNS MAPFEALYGK RSPV
Subjt: AVHFSLRERPYGLG-TERMVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALYGKRYRSPV
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| KAA0065438.1 pol protein [Cucumis melo var. makuwa] | 4.9e-33 | 48.6 | Show/hide |
Query: LLQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRGAIVFGAD---HPLP---------------WCAREDCVRPRL
LLQP S+P+WKWE +SMDFI+GLPRT R F+ IWV+VDRLTKSAHF+P + TYT + + H +P W + + RL
Subjt: LLQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRGAIVFGAD---HPLP---------------WCAREDCVRPRL
Query: AVHFSLRERPYGLG-TERMVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALYGKRYRSPV
FS P G TER+ +LEDMLRAC L+FP S LMEFAYNNS SMAPFEALYGK RSPV
Subjt: AVHFSLRERPYGLG-TERMVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALYGKRYRSPV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TP96 Reverse transcriptase | 1.8e-33 | 52.17 | Show/hide |
Query: LLQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRGAIVFGADHPLPWCAREDCVRPRLAVHFSLRERPYGLG-TER
LLQP S+P+WKWE +SMDFI+GLPRT R F+ IWV+VDRLTKSAHF+P + TYT + + L + + RL FS P G TER
Subjt: LLQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRGAIVFGADHPLPWCAREDCVRPRLAVHFSLRERPYGLG-TER
Query: MVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALYGKRYRSPV
+ +LEDMLRAC L+FP S LMEFAYNNS MAPFEALYGK RSPV
Subjt: MVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALYGKRYRSPV
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| A0A5A7UAA8 Reverse transcriptase | 4.1e-33 | 48.04 | Show/hide |
Query: LLQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRGAIVFGAD---HPLP---------------WCAREDCVRPRL
LLQP S+P+WKWE +SMDFI+GLPRT R F+ IWV+VDRLTKSAHF+P + TYT + + H +P W + + RL
Subjt: LLQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRGAIVFGAD---HPLP---------------WCAREDCVRPRL
Query: AVHFSLRERPYGLG-TERMVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALYGKRYRSPV
FS P G TER+ +LEDMLRAC L+FP S LMEFAYNNS MAPFEALYGK RSPV
Subjt: AVHFSLRERPYGLG-TERMVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALYGKRYRSPV
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| A0A5A7UFN6 Pol protein | 3.7e-34 | 47.75 | Show/hide |
Query: LLQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRGAIVFGAD---HPLP---------------WCAREDCVRPRL
LLQP S+P+WKWE +SMDFI+GLPRT R FS IWV+VDRLTKSAHF+P + TYT + + H +P W + + PRL
Subjt: LLQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRGAIVFGAD---HPLP---------------WCAREDCVRPRL
Query: AVHFSLRERPYGLGTERMVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALYGKRYRSPV
+ + G TER+ +LEDMLRAC L+FP S LMEFAYNNS MAPFEALYGK RSPV
Subjt: AVHFSLRERPYGLGTERMVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALYGKRYRSPV
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| A0A5A7UR79 Pol protein | 1.8e-33 | 48.04 | Show/hide |
Query: LLQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRGAIVFGAD---HPLP---------------WCAREDCVRPRL
LLQP S+P+WKWE +SMDFI+GLPRT R F+ IWV+VDRLTKSAHF+P + TYT + + H +P W + + RL
Subjt: LLQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRGAIVFGAD---HPLP---------------WCAREDCVRPRL
Query: AVHFSLRERPYGLG-TERMVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALYGKRYRSPV
FS+ P G TER+ +LEDMLRAC L+FP S LMEFAYNNS MAPFEALYGK RSPV
Subjt: AVHFSLRERPYGLG-TERMVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALYGKRYRSPV
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| A0A5A7VCT0 Pol protein | 2.4e-33 | 48.6 | Show/hide |
Query: LLQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRGAIVFGAD---HPLP---------------WCAREDCVRPRL
LLQP S+P+WKWE +SMDFI+GLPRT R F+ IWV+VDRLTKSAHF+P + TYT + + H +P W + + RL
Subjt: LLQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRGAIVFGAD---HPLP---------------WCAREDCVRPRL
Query: AVHFSLRERPYGLG-TERMVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALYGKRYRSPV
FS P G TER+ +LEDMLRAC L+FP S LMEFAYNNS SMAPFEALYGK RSPV
Subjt: AVHFSLRERPYGLG-TERMVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALYGKRYRSPV
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P0CT34 Transposon Tf2-1 polyprotein | 1.2e-10 | 27.54 | Show/hide |
Query: LQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRG---------------AIVFGADHPLPWCAREDCV-RPRLAVH
LQP + WE +SMDFI+ LP + ++ ++V+VDR +K A +PC + T EQ I+ DH +D + +
Subjt: LQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRG---------------AIVFGADHPLPWCAREDCV-RPRLAVH
Query: FSLRERPYGLGTERMVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALY
FSL PY T+ +R ++++ E +LR P + L++ +YNN++ M PFE ++
Subjt: FSLRERPYGLGTERMVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALY
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| P0CT35 Transposon Tf2-2 polyprotein | 1.2e-10 | 27.54 | Show/hide |
Query: LQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRG---------------AIVFGADHPLPWCAREDCV-RPRLAVH
LQP + WE +SMDFI+ LP + ++ ++V+VDR +K A +PC + T EQ I+ DH +D + +
Subjt: LQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRG---------------AIVFGADHPLPWCAREDCV-RPRLAVH
Query: FSLRERPYGLGTERMVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALY
FSL PY T+ +R ++++ E +LR P + L++ +YNN++ M PFE ++
Subjt: FSLRERPYGLGTERMVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALY
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| P0CT36 Transposon Tf2-3 polyprotein | 1.2e-10 | 27.54 | Show/hide |
Query: LQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRG---------------AIVFGADHPLPWCAREDCV-RPRLAVH
LQP + WE +SMDFI+ LP + ++ ++V+VDR +K A +PC + T EQ I+ DH +D + +
Subjt: LQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRG---------------AIVFGADHPLPWCAREDCV-RPRLAVH
Query: FSLRERPYGLGTERMVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALY
FSL PY T+ +R ++++ E +LR P + L++ +YNN++ M PFE ++
Subjt: FSLRERPYGLGTERMVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALY
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| P0CT41 Transposon Tf2-12 polyprotein | 1.2e-10 | 27.54 | Show/hide |
Query: LQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRG---------------AIVFGADHPLPWCAREDCV-RPRLAVH
LQP + WE +SMDFI+ LP + ++ ++V+VDR +K A +PC + T EQ I+ DH +D + +
Subjt: LQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRG---------------AIVFGADHPLPWCAREDCV-RPRLAVH
Query: FSLRERPYGLGTERMVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALY
FSL PY T+ +R ++++ E +LR P + L++ +YNN++ M PFE ++
Subjt: FSLRERPYGLGTERMVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALY
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| Q9UR07 Transposon Tf2-11 polyprotein | 1.2e-10 | 27.54 | Show/hide |
Query: LQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRG---------------AIVFGADHPLPWCAREDCV-RPRLAVH
LQP + WE +SMDFI+ LP + ++ ++V+VDR +K A +PC + T EQ I+ DH +D + +
Subjt: LQPSSVPQWKWEEISMDFISGLPRTQRKFSQIWVIVDRLTKSAHFIPCRDTYTVEQRG---------------AIVFGADHPLPWCAREDCV-RPRLAVH
Query: FSLRERPYGLGTERMVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALY
FSL PY T+ +R ++++ E +LR P + L++ +YNN++ M PFE ++
Subjt: FSLRERPYGLGTERMVDRESESILEDMLRACVLDFPCSLGPDSDLMEFAYNNSLSIDDSMAPFEALY
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