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Sed0024721 (gene) of Chayote v1 genome

Gene IDSed0024721
OrganismSechium edule (Chayote v1)
DescriptionProtein of unknown function (DUF 3339)
Genome locationLG03:4377338..4378352
RNA-Seq ExpressionSed0024721
SyntenySed0024721
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR021775 - Protein of unknown function DUF3339


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056546.1 hypothetical protein E6C27_scaffold288G00480 [Cucumis melo var. makuwa]2.1e-3966.23Show/hide
Query:  MNADWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAIREDEEVTGSSSVDVDTKSENEDSVEDEEDESVDGY
        M+ADWGPVVVAV LFILLSPGLLFQLPARIRVVEFG+MNTSGIAIL                   R++EEVTGS+SVDVD +SENE+S+EDEEDESV   
Subjt:  MNADWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAIREDEEVTGSSSVDVDTKSENEDSVEDEEDESVDGY

Query:  SFAVGLHAPELKHPIVPRKLEQKPRREQNEQNHSDHHRRPIRHSFREIVMD
        SF+VGLHAPELK  I+P KL+QKP R+Q E+ +SD H  PIRHSF +IV +
Subjt:  SFAVGLHAPELKHPIVPRKLEQKPRREQNEQNHSDHHRRPIRHSFREIVMD

KAE8652261.1 hypothetical protein Csa_022581 [Cucumis sativus]2.6e-4573.83Show/hide
Query:  MNADWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAIREDEEVTGSSSVDVDTKSENEDSVEDEEDESVDGY
        M+ADWGPVVVAV LFILLSPGLLFQLPARIRVVEFG+MNTSGIAILVHAIIFFCILTIL+IAIA           SVDVD +SENEDS+EDEEDESV   
Subjt:  MNADWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAIREDEEVTGSSSVDVDTKSENEDSVEDEEDESVDGY

Query:  SFAVGLHAPELKHPIVPRKLEQKPRREQNEQNHSDHHRRPIRHSFREIV
        SF++GLHAP+LK  I+ RKL+QK RR+Q E+ +SD HR PIRHSFR+ V
Subjt:  SFAVGLHAPELKHPIVPRKLEQKPRREQNEQNHSDHHRRPIRHSFREIV

KAG6578364.1 hypothetical protein SDJN03_22812, partial [Cucurbita argyrosperma subsp. sororia]3.4e-4572.67Show/hide
Query:  MNADWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAIREDEEVTGSSSVDVDTKSENEDSVEDEEDESVDGY
        MNADWGPVVVAV LFILLSPGLLFQLPARIRVVEFG+MNTSGIAILVHAIIFFCILTILVIAIA           S+DVDT+SENED V+D+E+E V+G 
Subjt:  MNADWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAIREDEEVTGSSSVDVDTKSENEDSVEDEEDESVDGY

Query:  SFAVGLHAPELKHPIVPRKLEQKPRREQNEQNHSDHHRRPIRHSFREIVM
          +VGLH P+LK  I+PRKLEQKP REQ EQ +SDH+R PIRH F + V+
Subjt:  SFAVGLHAPELKHPIVPRKLEQKPRREQNEQNHSDHHRRPIRHSFREIVM

KAG6602686.1 Actin-related protein 2/3 complex subunit 2A, partial [Cucurbita argyrosperma subsp. sororia]3.3e-4862.18Show/hide
Query:  MNADWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAIR----------------------------------
        M+ADWGPVVVAV LFI+LSPGLLFQLPARIRVVEFG+MNTSGIAILVHAIIFFCILTILVIAI I                                   
Subjt:  MNADWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAIR----------------------------------

Query:  -------EDEEVTGSSSVDVDTKSENEDSVEDEEDESVDGYSFAVGLHAPELKHPIVPRKLEQKPRREQNEQNHSDHHRRPIRHSFREIVMDR
                +EEVTGSS VDVD KSENED +EDEEDES++ YSF V LH PELK PI+PR+LEQKP R+Q+EQN+SDHH RPIRH  R+I   R
Subjt:  -------EDEEVTGSSSVDVDTKSENEDSVEDEEDESVDGYSFAVGLHAPELKHPIVPRKLEQKPRREQNEQNHSDHHRRPIRHSFREIVMDR

RZB59728.1 hypothetical protein D0Y65_042794 [Glycine soja]2.2e-3666.43Show/hide
Query:  MNADWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAIREDEEVTGSSSVDVDTKSENEDSVEDEEDESVDGY
        M ADWGPV++AV LFILLSPGLLFQ PAR RVVEFG+M+TSGIAILVHAIIFFCILTIL+           TGS+ VD+D   E+ED VE EEDE VD  
Subjt:  MNADWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAIREDEEVTGSSSVDVDTKSENEDSVEDEEDESVDGY

Query:  SFAVGLHAPELKHPIVPRKLEQKPRREQNEQNHSDHHRRPIRH
         FAVGLHA ELK   VPRK E++PR EQ+EQN+ D +R PI H
Subjt:  SFAVGLHAPELKHPIVPRKLEQKPRREQNEQNHSDHHRRPIRH

TrEMBL top hitse value%identityAlignment
A0A445GEX9 Uncharacterized protein1.1e-3666.43Show/hide
Query:  MNADWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAIREDEEVTGSSSVDVDTKSENEDSVEDEEDESVDGY
        M ADWGPV++AV LFILLSPGLLFQ PAR RVVEFG+M+TSGIAILVHAIIFFCILTIL+           TGS+ VD+D   E+ED VE EEDE VD  
Subjt:  MNADWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAIREDEEVTGSSSVDVDTKSENEDSVEDEEDESVDGY

Query:  SFAVGLHAPELKHPIVPRKLEQKPRREQNEQNHSDHHRRPIRH
         FAVGLHA ELK   VPRK E++PR EQ+EQN+ D +R PI H
Subjt:  SFAVGLHAPELKHPIVPRKLEQKPRREQNEQNHSDHHRRPIRH

A0A498HDU7 Uncharacterized protein2.3e-3153.5Show/hide
Query:  MNADWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAIR-----------------EDEEVTGSSSVDVDTKS
        M+ADWGPVVVAV +FILLSPGLLFQLPAR RV+EFG+M+TSGIAILVHA+I+FCI+TIL  + +I+                 E   VTGS+ +DVD   
Subjt:  MNADWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAIR-----------------EDEEVTGSSSVDVDTKS

Query:  ENEDSVEDEEDESVDGYSFAVGLHAPELKHPIVPRKLEQKPRREQNEQNHSDHHRRP
        ++E+ +E+EE+ESVD    AVGLHAP+L+   V R+ E++PR +Q++Q+HS  +  P
Subjt:  ENEDSVEDEEDESVDGYSFAVGLHAPELKHPIVPRKLEQKPRREQNEQNHSDHHRRP

A0A5A7QQI9 Uncharacterized protein3.5e-3262.14Show/hide
Query:  DWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAIREDEEVTGSSSVDVDTKSENEDSVEDEEDESVDGYSFA
        DWGPVVVAV +FILLSPGLLFQLPAR RV+EFG+M TSGI+ILVHAI++F  L  L         E  TGS+ VDVD   E+E+SVE EEDE VDG S A
Subjt:  DWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAIREDEEVTGSSSVDVDTKSENEDSVEDEEDESVDGYSFA

Query:  VGLHAPELKHPIVPRKLEQKPRREQNEQNHSDHHRRPIRH
        VGLHA EL+  +VPR L+Q+PR +Q E+ +SD HR P+ H
Subjt:  VGLHAPELKHPIVPRKLEQKPRREQNEQNHSDHHRRPIRH

A0A5D3BWV4 Uncharacterized protein1.0e-3966.23Show/hide
Query:  MNADWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAIREDEEVTGSSSVDVDTKSENEDSVEDEEDESVDGY
        M+ADWGPVVVAV LFILLSPGLLFQLPARIRVVEFG+MNTSGIAIL                   R++EEVTGS+SVDVD +SENE+S+EDEEDESV   
Subjt:  MNADWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAIREDEEVTGSSSVDVDTKSENEDSVEDEEDESVDGY

Query:  SFAVGLHAPELKHPIVPRKLEQKPRREQNEQNHSDHHRRPIRHSFREIVMD
        SF+VGLHAPELK  I+P KL+QKP R+Q E+ +SD H  PIRHSF +IV +
Subjt:  SFAVGLHAPELKHPIVPRKLEQKPRREQNEQNHSDHHRRPIRHSFREIVMD

A0A5P1F5Q5 Uncharacterized protein5.9e-2753.9Show/hide
Query:  MNADWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAIREDEEVTGSSSVDVDTKSENEDSVEDEEDESVDGY
        M+ DWGPV+VAV LFILLSPGLLFQLP R RV+EFGSM TSGI+ILVH+I+FFC+LTILVIA+             ++++     ED  E EEDE V  Y
Subjt:  MNADWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAIREDEEVTGSSSVDVDTKSENEDSVEDEEDESVDGY

Query:  SFAVGLHAPELKHPIVPRKLEQKPRREQNEQNHSDHHRRPI
          + GL  PEL   ++ R L+Q+   EQ+EQ+H   HR PI
Subjt:  SFAVGLHAPELKHPIVPRKLEQKPRREQNEQNHSDHHRRPI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01940.1 Protein of unknown function (DUF 3339)4.4e-1977.78Show/hide
Query:  ADWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAI
        ADWGPV VAV LF++LSPGLLFQLPAR RV+E G+M TSGI+ILVHAI+FF I+TILVIAI I
Subjt:  ADWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAI

AT3G27027.1 Protein of unknown function (DUF 3339)3.9e-2384.62Show/hide
Query:  MNADWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAI
        M+ DWGPV+VAV LFILLSPGLLFQLPAR RVVEFG+M TSGIAILVHA I+FCILTILVIAI I
Subjt:  MNADWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAI

AT3G48660.1 Protein of unknown function (DUF 3339)8.4e-1873.02Show/hide
Query:  ADWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAI
        ADWGPVVVAV LF+LL+PGLLFQ+PAR RVVEFG+M TSG +ILVH IIFF ++TI  IAI +
Subjt:  ADWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAI

AT5G40980.1 Protein of unknown function (DUF 3339)2.3e-2383.08Show/hide
Query:  MNADWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAI
        M+ADWGPV+VAV LFILLSPGLLFQLPAR RV+EFG+M+TSGI+ILVHAII+FCILTIL+IAI I
Subjt:  MNADWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAI

AT5G63500.1 Protein of unknown function (DUF 3339)5.4e-1769.84Show/hide
Query:  ADWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAI
        ADWGPV++AV LF++LSPGLLFQ+PA  RVVEFG+M TSG +ILVHAIIFF ++TI  IAI +
Subjt:  ADWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGCAGACTGGGGACCGGTTGTCGTGGCAGTGGGGCTGTTCATTCTCCTGTCCCCGGGGTTGCTTTTTCAGTTGCCGGCGAGAATCAGGGTGGTGGAGTTTGGGAG
CATGAACACCAGTGGGATTGCCATTCTGGTTCACGCCATCATTTTTTTCTGCATACTCACCATATTGGTCATCGCTATTGCGATACGGGAAGATGAAGAGGTTACCGGAT
CATCCAGCGTTGATGTGGACACGAAGAGCGAGAATGAAGACAGCGTAGAGGATGAAGAAGACGAGAGTGTGGATGGCTACAGCTTTGCCGTTGGTCTTCATGCTCCCGAA
CTCAAACATCCGATTGTTCCCCGGAAACTGGAACAGAAGCCCCGGCGAGAGCAGAACGAACAGAACCACTCCGATCACCACCGGCGCCCAATCCGACATAGTTTCAGAGA
AATCGTGATGGATCGAAAGAGAGAATCGCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAATGCAGACTGGGGACCGGTTGTCGTGGCAGTGGGGCTGTTCATTCTCCTGTCCCCGGGGTTGCTTTTTCAGTTGCCGGCGAGAATCAGGGTGGTGGAGTTTGGGAG
CATGAACACCAGTGGGATTGCCATTCTGGTTCACGCCATCATTTTTTTCTGCATACTCACCATATTGGTCATCGCTATTGCGATACGGGAAGATGAAGAGGTTACCGGAT
CATCCAGCGTTGATGTGGACACGAAGAGCGAGAATGAAGACAGCGTAGAGGATGAAGAAGACGAGAGTGTGGATGGCTACAGCTTTGCCGTTGGTCTTCATGCTCCCGAA
CTCAAACATCCGATTGTTCCCCGGAAACTGGAACAGAAGCCCCGGCGAGAGCAGAACGAACAGAACCACTCCGATCACCACCGGCGCCCAATCCGACATAGTTTCAGAGA
AATCGTGATGGATCGAAAGAGAGAATCGCAATAG
Protein sequenceShow/hide protein sequence
MNADWGPVVVAVGLFILLSPGLLFQLPARIRVVEFGSMNTSGIAILVHAIIFFCILTILVIAIAIREDEEVTGSSSVDVDTKSENEDSVEDEEDESVDGYSFAVGLHAPE
LKHPIVPRKLEQKPRREQNEQNHSDHHRRPIRHSFREIVMDRKRESQ