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Sed0024739 (gene) of Chayote v1 genome

Gene IDSed0024739
OrganismSechium edule (Chayote v1)
DescriptionCyclin-dependent kinases regulatory subunit
Genome locationLG03:12422540..12424127
RNA-Seq ExpressionSed0024739
SyntenySed0024739
Gene Ontology termsGO:0007346 - regulation of mitotic cell cycle (biological process)
GO:0045737 - positive regulation of cyclin-dependent protein serine/threonine kinase activity (biological process)
GO:0051301 - cell division (biological process)
GO:0000307 - cyclin-dependent protein kinase holoenzyme complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
GO:0016301 - kinase activity (molecular function)
GO:0019901 - protein kinase binding (molecular function)
GO:0042393 - histone binding (molecular function)
GO:0043130 - ubiquitin binding (molecular function)
GO:0061575 - cyclin-dependent protein serine/threonine kinase activator activity (molecular function)
InterPro domainsIPR000789 - Cyclin-dependent kinase, regulatory subunit
IPR036858 - Cyclin-dependent kinase, regulatory subunit superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5186146.1 Cyclin-dependent kinases regulatory subunit [Thalictrum thalictroides]1.1e-4096.55Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQILAK
        MGQIQYSEKYFDD +EYRHVVL PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQILAK
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQILAK

PIA54927.1 hypothetical protein AQUCO_00901082v1 [Aquilegia coerulea]4.8e-4196.55Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQILAK
        MGQIQYSEKYFDD YEYRHV+L PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQILAK
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQILAK

XP_007207527.1 cyclin-dependent kinases regulatory subunit 1 [Prunus persica]1.1e-4096.55Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQILAK
        MGQIQYSEKYFDDIYEYRHVVL  EVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQ+LAK
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQILAK

XP_011654109.1 cyclin-dependent kinases regulatory subunit 1 [Cucumis sativus]4.8e-4198.86Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQA-QQILAK
        MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQA QQILAK
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQA-QQILAK

XP_022152941.1 cyclin-dependent kinases regulatory subunit 1 [Momordica charantia]6.2e-4196.55Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQILAK
        MGQIQYSEKYFDD YEYRHVVL PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQI+AK
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQILAK

TrEMBL top hitse value%identityAlignment
A0A0A0LY04 Cyclin-dependent kinases regulatory subunit2.3e-4198.86Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQA-QQILAK
        MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQA QQILAK
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQA-QQILAK

A0A1S4E4W6 Cyclin-dependent kinases regulatory subunit2.3e-4198.86Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQA-QQILAK
        MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQA QQILAK
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQA-QQILAK

A0A2G5EH85 Cyclin-dependent kinases regulatory subunit2.3e-4196.55Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQILAK
        MGQIQYSEKYFDD YEYRHV+L PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQILAK
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQILAK

A0A6J1DJ87 Cyclin-dependent kinases regulatory subunit3.0e-4196.55Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQILAK
        MGQIQYSEKYFDD YEYRHVVL PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQI+AK
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQILAK

A0A6J1I3M7 Cyclin-dependent kinases regulatory subunit5.2e-4197.73Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQA-QQILAK
        MGQIQYSEKYFDDIYEYRHVVLTP+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQA QQILAK
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQA-QQILAK

SwissProt top hitse value%identityAlignment
A2XCH8 Cyclin-dependent kinases regulatory subunit 14.6e-3993.83Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQA
        MGQIQYSEKYFDD YEYRHVVL PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLN+QQQQE  A
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQA

O23249 Cyclin-dependent kinases regulatory subunit 14.5e-4291.95Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQILAK
        MGQIQYSEKYFDD +EYRHVVL PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYA+HRPEPHIMLFRRPLNYQQQQENQAQ +L K
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQILAK

P55933 Probable cyclin-dependent kinases regulatory subunit3.1e-2778.79Show/hide
Query:  IQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRR
        IQYSEKY+DD +EYRHV+L P+VAK +PKNRLLSE EWR +GVQQS+GWVHYA+HRPEPHI+LFRR
Subjt:  IQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRR

Q6PS57 Cyclin-dependent kinases regulatory subunit 14.6e-3993.83Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQA
        MGQIQYSEKYFDD YEYRHVVL PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLN+QQQQE  A
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQA

Q9SJJ5 Cyclin-dependent kinases regulatory subunit 27.4e-3787.5Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQ
        MGQIQYS+KYFDD +EYRHVVL PEVAKLLPKNR+LSE+EWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQ+ + Q
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQ

Arabidopsis top hitse value%identityAlignment
AT2G27960.1 cyclin-dependent kinase-subunit 13.2e-4391.95Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQILAK
        MGQIQYSEKYFDD +EYRHVVL PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYA+HRPEPHIMLFRRPLNYQQQQENQAQ +L K
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQILAK

AT2G27970.1 CDK-subunit 25.3e-3887.5Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQ
        MGQIQYS+KYFDD +EYRHVVL PEVAKLLPKNR+LSE+EWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQ+ + Q
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACAGATCCAGTACTCGGAGAAGTATTTCGATGATATCTATGAGTATAGGCATGTGGTTCTTACTCCTGAAGTGGCGAAACTTCTCCCTAAGAATCGCCTTCTTTC
TGAAAATGAATGGAGAGCGATCGGGGTTCAGCAGAGCCGTGGATGGGTTCATTATGCGATTCATCGCCCAGAGCCGCACATAATGCTGTTCAGGAGACCACTCAACTATC
AGCAGCAGCAAGAGAATCAAGCTCAGCAGATTCTGGCCAAGTGA
mRNA sequenceShow/hide mRNA sequence
TAAAATTTTCATTTTTGTCCCCTCAACTTTCCATATTTGCTTCATTTGCCAAATTTAAAACAATATTTCCACTTCTTTTCTCATTCGTTCTTTTCATCTACTTCTTCATC
GCTCTTCAGATTCATCAAGCCCTAGTGGATTTGCAGTCAGAAATTCGGTGCGATGGGACAGATCCAGTACTCGGAGAAGTATTTCGATGATATCTATGAGTATAGGCATG
TGGTTCTTACTCCTGAAGTGGCGAAACTTCTCCCTAAGAATCGCCTTCTTTCTGAAAATGAATGGAGAGCGATCGGGGTTCAGCAGAGCCGTGGATGGGTTCATTATGCG
ATTCATCGCCCAGAGCCGCACATAATGCTGTTCAGGAGACCACTCAACTATCAGCAGCAGCAAGAGAATCAAGCTCAGCAGATTCTGGCCAAGTGATGATAGGTTTGATG
CACTTTATCTTGCCTAGATCACTGTTCAAATATCTCCATATAAAACAAGAAAATGAATCATGTGTTTGTGTTTGTGTTTGTGTTTGCTGTGTAGTTTAGTGTAGTTTCTT
CTCCAATTTGGAGAAGTTCTATGGCCCAGTTTATATCTGTCATAGTCATAAGCAGCACCCCCCCCATGGTTGATAAATTTGTGGTTTTAAATTGCTTTGATATAAATATG
GTTTGTCTTCTTTTTTCTTGGCA
Protein sequenceShow/hide protein sequence
MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQILAK