; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0024751 (gene) of Chayote v1 genome

Gene IDSed0024751
OrganismSechium edule (Chayote v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG08:29666697..29669080
RNA-Seq ExpressionSed0024751
SyntenySed0024751
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG51528.1 hypothetical protein EZV62_024052 [Acer yangbiense]9.6e-1928.35Show/hide
Query:  KSFSLSEKEEKVVPINKGPSLLSPESVRLCLAAKILTSKQVNVDAFSGVMKTVWRVHLDTRFEFAGNNTFIIKFKNIMEKHRVVNQGPWSFDRGLVVL--
        ++ S+ E++ ++  I      +  E V  CL  K+L+ K+VN +AF  VM+ +W    +   E  G N F+  FKN  ++ R+  +GPW FDR L VL  
Subjt:  KSFSLSEKEEKVVPINKGPSLLSPESVRLCLAAKILTSKQVNVDAFSGVMKTVWRVHLDTRFEFAGNNTFIIKFKNIMEKHRVVNQGPWSFDRGLVVL--

Query:  --------------------------------------------------MDLKDGQVIVCPLLYEKLPDFCFACGSIGHLTKECY----KEDVIDSGAK
                                                          +D K G ++V  L YE+LPDFC+ CG +GH   EC+    K++ ++    
Subjt:  --------------------------------------------------MDLKDGQVIVCPLLYEKLPDFCFACGSIGHLTKECY----KEDVIDSGAK

Query:  SYEYGDWLRAPYVKKAGQKMNNDGNEDPEGSPKRER-SNDFGVLGNRWGSGSRSDIESWRK
        S +YG WLRA  V+K   K  + G+    GS  +ER S D+    N+  S     +   RK
Subjt:  SYEYGDWLRAPYVKKAGQKMNNDGNEDPEGSPKRER-SNDFGVLGNRWGSGSRSDIESWRK

TXG69340.1 hypothetical protein EZV62_004275 [Acer yangbiense]4.8e-1827.31Show/hide
Query:  DFIKRWKSFSLSEKEEKVVPINKGPSLLSPESVRLCLAAKILTSKQVNVDAFSGVMKTVWRVHLDTRFEFAGNNTFIIKFKNIMEKHRVVNQGPWSFDRG
        +  K +++ SL++++  V+ +++  S+   + V  CL  K+L+ K+VN +AF G+++ +W        E  G+N F+  F N  ++++V+ +G W F   
Subjt:  DFIKRWKSFSLSEKEEKVVPINKGPSLLSPESVRLCLAAKILTSKQVNVDAFSGVMKTVWRVHLDTRFEFAGNNTFIIKFKNIMEKHRVVNQGPWSFDRG

Query:  LVVL----------------MDL-----------------------KDGQVIVCPLLYEKLPDFCFACGSIGHLTKECYKEDVIDSGAKS--YEYGDWLR
        L+VL                +D                        K  +V +  L YE+LPDFC+ACG IGH  KEC  E+ +    +    ++G WL+
Subjt:  LVVL----------------MDL-----------------------KDGQVIVCPLLYEKLPDFCFACGSIGHLTKECYKEDVIDSGAKS--YEYGDWLR

Query:  APYVKKAGQKMNNDGN
        A  ++K   + N  GN
Subjt:  APYVKKAGQKMNNDGN

TXG72251.1 hypothetical protein EZV62_000830 [Acer yangbiense]3.9e-2033.18Show/hide
Query:  SLSEKEEKVVPINKGPSLLSPESVRLCLAAKILTSKQVNVDAFSGVMKTVWRVHLDTRFEFAGNNTFIIKFKNIMEKHRVVNQGPWSFDRGLVVL-----
        SL++++E ++ + +   +   + V  CL   +L+ K+VN +AF G+M+ +W        E  G+N F+  F N  +++RV  +GPW F   L+ L     
Subjt:  SLSEKEEKVVPINKGPSLLSPESVRLCLAAKILTSKQVNVDAFSGVMKTVWRVHLDTRFEFAGNNTFIIKFKNIMEKHRVVNQGPWSFDRGLVVL-----

Query:  ---------MDLKDG---QVIVCPLLYEKLPDFCFACGSIGHLTKECYKEDVIDSGA---KSYEYGDWLRAPYVKKAGQKMNNDGNEDPEGSPKRERSND
                 + LK G   ++I+  L YE+LPDFC+ACG IGH  KE Y ++V    A      ++G WL+A   KK   + N+ G     GS  R RS D
Subjt:  ---------MDLKDG---QVIVCPLLYEKLPDFCFACGSIGHLTKECYKEDVIDSGA---KSYEYGDWLRAPYVKKAGQKMNNDGNEDPEGSPKRERSND

Query:  FGVLGNRWGSGSRS
             N  G GS S
Subjt:  FGVLGNRWGSGSRS

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]1.7e-2830.33Show/hide
Query:  MEDFIKRWKSFSLSEKEEKVVPINKGPSLLSPESVRLCLAAKILTSKQVNVDAFSGVMKTVWRVHLDTRFEFAGNNTFIIKFKNIMEKHRVVNQGPWSFD
        M++    W+ F  +  E + V I++G  +L+ ++V+LC+ AK+ TSK+++ +A   VMK+VWRVH  TRFE  G N ++I FK++ EK RV++ GPW+F+
Subjt:  MEDFIKRWKSFSLSEKEEKVVPINKGPSLLSPESVRLCLAAKILTSKQVNVDAFSGVMKTVWRVHLDTRFEFAGNNTFIIKFKNIMEKHRVVNQGPWSFD

Query:  RGLVVL---------MDL----------------------------------------------------------------------KDGQVIVCPLLY
        + L+VL         +D+                                                                       DG+ I CPL Y
Subjt:  RGLVVL---------MDL----------------------------------------------------------------------KDGQVIVCPLLY

Query:  EKLPDFCFACGSIGHLTKECYKEDVIDSGAKSYEYGDWLRAPYVKKAGQKMNNDGNEDPEGSPKRE---RSNDFG----VLGNRWGSGS-RSDIESWRKI
        EKLPDFC+ CG IGH  +EC +   + +     +YGDWLRA  +KK+               P+ E   R   FG    V G R G G  R   E+WR I
Subjt:  EKLPDFCFACGSIGHLTKECYKEDVIDSGAKSYEYGDWLRAPYVKKAGQKMNNDGNEDPEGSPKRE---RSNDFG----VLGNRWGSGS-RSDIESWRKI

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]3.5e-2128.38Show/hide
Query:  MEDFIKRWKSFSLSEKEEKVVPINKGPSLLSPESVRLCLAAKILTSKQVNVDAFSGVMKTVWRVHLDTRFEFAGNNTFIIKFKNIMEKHRVVNQGPWSFD
        M+D  K W++F+L ++EE  + I+    +L+ ++++LC   K+  SK++ V+AF+ VMK VW++H  TR E AG N ++I FK + EK RV + GPW+FD
Subjt:  MEDFIKRWKSFSLSEKEEKVVPINKGPSLLSPESVRLCLAAKILTSKQVNVDAFSGVMKTVWRVHLDTRFEFAGNNTFIIKFKNIMEKHRVVNQGPWSFD

Query:  RGLVVL-------------------------------------------------------------------------------MDLKDGQVIVCPLLY
        + L++L                                                                               +   DG+ I CPL Y
Subjt:  RGLVVL-------------------------------------------------------------------------------MDLKDGQVIVCPLLY

Query:  EKLPDFCFACGSIGHLTKECYK
        E+LPDFC+ CG +GH  +E  K
Subjt:  EKLPDFCFACGSIGHLTKECYK

TrEMBL top hitse value%identityAlignment
A0A5C7H3I8 CCHC-type domain-containing protein4.6e-1928.35Show/hide
Query:  KSFSLSEKEEKVVPINKGPSLLSPESVRLCLAAKILTSKQVNVDAFSGVMKTVWRVHLDTRFEFAGNNTFIIKFKNIMEKHRVVNQGPWSFDRGLVVL--
        ++ S+ E++ ++  I      +  E V  CL  K+L+ K+VN +AF  VM+ +W    +   E  G N F+  FKN  ++ R+  +GPW FDR L VL  
Subjt:  KSFSLSEKEEKVVPINKGPSLLSPESVRLCLAAKILTSKQVNVDAFSGVMKTVWRVHLDTRFEFAGNNTFIIKFKNIMEKHRVVNQGPWSFDRGLVVL--

Query:  --------------------------------------------------MDLKDGQVIVCPLLYEKLPDFCFACGSIGHLTKECY----KEDVIDSGAK
                                                          +D K G ++V  L YE+LPDFC+ CG +GH   EC+    K++ ++    
Subjt:  --------------------------------------------------MDLKDGQVIVCPLLYEKLPDFCFACGSIGHLTKECY----KEDVIDSGAK

Query:  SYEYGDWLRAPYVKKAGQKMNNDGNEDPEGSPKRER-SNDFGVLGNRWGSGSRSDIESWRK
        S +YG WLRA  V+K   K  + G+    GS  +ER S D+    N+  S     +   RK
Subjt:  SYEYGDWLRAPYVKKAGQKMNNDGNEDPEGSPKRER-SNDFGVLGNRWGSGSRSDIESWRK

A0A5C7IJ96 CCHC-type domain-containing protein2.3e-1827.31Show/hide
Query:  DFIKRWKSFSLSEKEEKVVPINKGPSLLSPESVRLCLAAKILTSKQVNVDAFSGVMKTVWRVHLDTRFEFAGNNTFIIKFKNIMEKHRVVNQGPWSFDRG
        +  K +++ SL++++  V+ +++  S+   + V  CL  K+L+ K+VN +AF G+++ +W        E  G+N F+  F N  ++++V+ +G W F   
Subjt:  DFIKRWKSFSLSEKEEKVVPINKGPSLLSPESVRLCLAAKILTSKQVNVDAFSGVMKTVWRVHLDTRFEFAGNNTFIIKFKNIMEKHRVVNQGPWSFDRG

Query:  LVVL----------------MDL-----------------------KDGQVIVCPLLYEKLPDFCFACGSIGHLTKECYKEDVIDSGAKS--YEYGDWLR
        L+VL                +D                        K  +V +  L YE+LPDFC+ACG IGH  KEC  E+ +    +    ++G WL+
Subjt:  LVVL----------------MDL-----------------------KDGQVIVCPLLYEKLPDFCFACGSIGHLTKECYKEDVIDSGAKS--YEYGDWLR

Query:  APYVKKAGQKMNNDGN
        A  ++K   + N  GN
Subjt:  APYVKKAGQKMNNDGN

A0A5C7ISM4 Uncharacterized protein1.9e-2033.18Show/hide
Query:  SLSEKEEKVVPINKGPSLLSPESVRLCLAAKILTSKQVNVDAFSGVMKTVWRVHLDTRFEFAGNNTFIIKFKNIMEKHRVVNQGPWSFDRGLVVL-----
        SL++++E ++ + +   +   + V  CL   +L+ K+VN +AF G+M+ +W        E  G+N F+  F N  +++RV  +GPW F   L+ L     
Subjt:  SLSEKEEKVVPINKGPSLLSPESVRLCLAAKILTSKQVNVDAFSGVMKTVWRVHLDTRFEFAGNNTFIIKFKNIMEKHRVVNQGPWSFDRGLVVL-----

Query:  ---------MDLKDG---QVIVCPLLYEKLPDFCFACGSIGHLTKECYKEDVIDSGA---KSYEYGDWLRAPYVKKAGQKMNNDGNEDPEGSPKRERSND
                 + LK G   ++I+  L YE+LPDFC+ACG IGH  KE Y ++V    A      ++G WL+A   KK   + N+ G     GS  R RS D
Subjt:  ---------MDLKDG---QVIVCPLLYEKLPDFCFACGSIGHLTKECYKEDVIDSGA---KSYEYGDWLRAPYVKKAGQKMNNDGNEDPEGSPKRERSND

Query:  FGVLGNRWGSGSRS
             N  G GS S
Subjt:  FGVLGNRWGSGSRS

A0A6J1D765 uncharacterized protein LOC1110179028.4e-2930.33Show/hide
Query:  MEDFIKRWKSFSLSEKEEKVVPINKGPSLLSPESVRLCLAAKILTSKQVNVDAFSGVMKTVWRVHLDTRFEFAGNNTFIIKFKNIMEKHRVVNQGPWSFD
        M++    W+ F  +  E + V I++G  +L+ ++V+LC+ AK+ TSK+++ +A   VMK+VWRVH  TRFE  G N ++I FK++ EK RV++ GPW+F+
Subjt:  MEDFIKRWKSFSLSEKEEKVVPINKGPSLLSPESVRLCLAAKILTSKQVNVDAFSGVMKTVWRVHLDTRFEFAGNNTFIIKFKNIMEKHRVVNQGPWSFD

Query:  RGLVVL---------MDL----------------------------------------------------------------------KDGQVIVCPLLY
        + L+VL         +D+                                                                       DG+ I CPL Y
Subjt:  RGLVVL---------MDL----------------------------------------------------------------------KDGQVIVCPLLY

Query:  EKLPDFCFACGSIGHLTKECYKEDVIDSGAKSYEYGDWLRAPYVKKAGQKMNNDGNEDPEGSPKRE---RSNDFG----VLGNRWGSGS-RSDIESWRKI
        EKLPDFC+ CG IGH  +EC +   + +     +YGDWLRA  +KK+               P+ E   R   FG    V G R G G  R   E+WR I
Subjt:  EKLPDFCFACGSIGHLTKECYKEDVIDSGAKSYEYGDWLRAPYVKKAGQKMNNDGNEDPEGSPKRE---RSNDFG----VLGNRWGSGS-RSDIESWRKI

A0A6J1DVS4 uncharacterized protein LOC1110235551.7e-2128.38Show/hide
Query:  MEDFIKRWKSFSLSEKEEKVVPINKGPSLLSPESVRLCLAAKILTSKQVNVDAFSGVMKTVWRVHLDTRFEFAGNNTFIIKFKNIMEKHRVVNQGPWSFD
        M+D  K W++F+L ++EE  + I+    +L+ ++++LC   K+  SK++ V+AF+ VMK VW++H  TR E AG N ++I FK + EK RV + GPW+FD
Subjt:  MEDFIKRWKSFSLSEKEEKVVPINKGPSLLSPESVRLCLAAKILTSKQVNVDAFSGVMKTVWRVHLDTRFEFAGNNTFIIKFKNIMEKHRVVNQGPWSFD

Query:  RGLVVL-------------------------------------------------------------------------------MDLKDGQVIVCPLLY
        + L++L                                                                               +   DG+ I CPL Y
Subjt:  RGLVVL-------------------------------------------------------------------------------MDLKDGQVIVCPLLY

Query:  EKLPDFCFACGSIGHLTKECYK
        E+LPDFC+ CG +GH  +E  K
Subjt:  EKLPDFCFACGSIGHLTKECYK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATTTCATTAAAAGATGGAAGTCTTTTTCACTTTCTGAAAAAGAGGAGAAAGTTGTGCCGATTAATAAGGGCCCAAGTCTTTTATCTCCGGAGAGCGTTCGTTT
GTGTCTTGCAGCAAAAATTTTGACTAGCAAACAGGTTAATGTTGATGCCTTTTCGGGTGTTATGAAGACAGTGTGGAGAGTGCATCTGGATACTCGTTTTGAATTTGCTG
GTAACAACACTTTCATAATAAAATTCAAGAACATTATGGAAAAACACAGAGTTGTAAACCAAGGTCCATGGTCATTTGATAGGGGATTGGTGGTTCTTATGGACTTAAAG
GATGGGCAGGTTATTGTATGTCCTTTGCTCTATGAAAAGCTTCCCGATTTTTGCTTTGCGTGCGGATCTATTGGCCATTTGACAAAGGAATGCTATAAAGAAGATGTGAT
TGATTCTGGAGCAAAATCTTATGAGTATGGGGATTGGCTAAGGGCTCCTTATGTGAAGAAAGCTGGTCAAAAAATGAATAATGATGGTAATGAAGATCCTGAAGGCAGCC
CGAAGAGAGAGAGATCGAATGATTTTGGGGTTCTTGGTAATCGATGGGGATCGGGGAGTCGTAGTGATATCGAAAGCTGGAGAAAAATCCCAAAAATAAAGGAAAATGAT
ATGGAAAGAACTATAAACCCACATGAACAGAAAATGGATATGACTATTCAGCACTCCAGGAAACTTAATTTTGATGTTATTAGCTTGATGAAGGAAGATACTAATGGAAA
AAACAGAGGAATTGTGATCTCTGAAAAAAAGAAAGGAAAACTGAAATTTGGTGATTGTGGGGAGTACAACGTTGAAGATCTTAATGAGAAAGAGTCTTCTTTGAATAGAA
TAGTGACTAATGATATTGAGCCTCTTGAGCGGACTCTGATAAATAATAACTCTTTAGCAAAGGAGGACAATGAAAAGGGAGGGAAAATCAGGAAGTTTAGGCGACTTCGA
CCTATCTCTGGAATAGAGGAAAAGGGTCATGTGAACATAGATGTAGACAAGGGCACAAGGAAGATGGATTTTGAAAACGAGGATGTGATCAAGGGCAAAAGAACTTGTGT
TGATGAATTGAACTCGTACAGCTTGGTGGTGGATGAATTCTGGTTGGATGACCCAGATTGCATTGAAAAGGTAAAAGCTGGTTGGAATGAATGGGGGAACAGCTCAAAAG
GTCTAATTGAGTCATTAAATGATTGTAGATCCCTTCTGTGGGGATGGGGGAGGAATCTTAAAAAGATGAAATGGGATACTTTGAGGAGATTGAGAAATCTTATTAGAGAG
GAGTTTTTGAATCCTTGTGGCCCTGATTTTGTGAAAATTCGCCATATTGAAGATGATCTTAATTCTCTTGTGCTTGCTGAAGAAAAATACTGGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGATTTCATTAAAAGATGGAAGTCTTTTTCACTTTCTGAAAAAGAGGAGAAAGTTGTGCCGATTAATAAGGGCCCAAGTCTTTTATCTCCGGAGAGCGTTCGTTT
GTGTCTTGCAGCAAAAATTTTGACTAGCAAACAGGTTAATGTTGATGCCTTTTCGGGTGTTATGAAGACAGTGTGGAGAGTGCATCTGGATACTCGTTTTGAATTTGCTG
GTAACAACACTTTCATAATAAAATTCAAGAACATTATGGAAAAACACAGAGTTGTAAACCAAGGTCCATGGTCATTTGATAGGGGATTGGTGGTTCTTATGGACTTAAAG
GATGGGCAGGTTATTGTATGTCCTTTGCTCTATGAAAAGCTTCCCGATTTTTGCTTTGCGTGCGGATCTATTGGCCATTTGACAAAGGAATGCTATAAAGAAGATGTGAT
TGATTCTGGAGCAAAATCTTATGAGTATGGGGATTGGCTAAGGGCTCCTTATGTGAAGAAAGCTGGTCAAAAAATGAATAATGATGGTAATGAAGATCCTGAAGGCAGCC
CGAAGAGAGAGAGATCGAATGATTTTGGGGTTCTTGGTAATCGATGGGGATCGGGGAGTCGTAGTGATATCGAAAGCTGGAGAAAAATCCCAAAAATAAAGGAAAATGAT
ATGGAAAGAACTATAAACCCACATGAACAGAAAATGGATATGACTATTCAGCACTCCAGGAAACTTAATTTTGATGTTATTAGCTTGATGAAGGAAGATACTAATGGAAA
AAACAGAGGAATTGTGATCTCTGAAAAAAAGAAAGGAAAACTGAAATTTGGTGATTGTGGGGAGTACAACGTTGAAGATCTTAATGAGAAAGAGTCTTCTTTGAATAGAA
TAGTGACTAATGATATTGAGCCTCTTGAGCGGACTCTGATAAATAATAACTCTTTAGCAAAGGAGGACAATGAAAAGGGAGGGAAAATCAGGAAGTTTAGGCGACTTCGA
CCTATCTCTGGAATAGAGGAAAAGGGTCATGTGAACATAGATGTAGACAAGGGCACAAGGAAGATGGATTTTGAAAACGAGGATGTGATCAAGGGCAAAAGAACTTGTGT
TGATGAATTGAACTCGTACAGCTTGGTGGTGGATGAATTCTGGTTGGATGACCCAGATTGCATTGAAAAGGTAAAAGCTGGTTGGAATGAATGGGGGAACAGCTCAAAAG
GTCTAATTGAGTCATTAAATGATTGTAGATCCCTTCTGTGGGGATGGGGGAGGAATCTTAAAAAGATGAAATGGGATACTTTGAGGAGATTGAGAAATCTTATTAGAGAG
GAGTTTTTGAATCCTTGTGGCCCTGATTTTGTGAAAATTCGCCATATTGAAGATGATCTTAATTCTCTTGTGCTTGCTGAAGAAAAATACTGGAAGTAG
Protein sequenceShow/hide protein sequence
MEDFIKRWKSFSLSEKEEKVVPINKGPSLLSPESVRLCLAAKILTSKQVNVDAFSGVMKTVWRVHLDTRFEFAGNNTFIIKFKNIMEKHRVVNQGPWSFDRGLVVLMDLK
DGQVIVCPLLYEKLPDFCFACGSIGHLTKECYKEDVIDSGAKSYEYGDWLRAPYVKKAGQKMNNDGNEDPEGSPKRERSNDFGVLGNRWGSGSRSDIESWRKIPKIKEND
MERTINPHEQKMDMTIQHSRKLNFDVISLMKEDTNGKNRGIVISEKKKGKLKFGDCGEYNVEDLNEKESSLNRIVTNDIEPLERTLINNNSLAKEDNEKGGKIRKFRRLR
PISGIEEKGHVNIDVDKGTRKMDFENEDVIKGKRTCVDELNSYSLVVDEFWLDDPDCIEKVKAGWNEWGNSSKGLIESLNDCRSLLWGWGRNLKKMKWDTLRRLRNLIRE
EFLNPCGPDFVKIRHIEDDLNSLVLAEEKYWK