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Sed0024779 (gene) of Chayote v1 genome

Gene IDSed0024779
OrganismSechium edule (Chayote v1)
DescriptionFanconi anemia group D2 protein
Genome locationLG07:3892848..3897364
RNA-Seq ExpressionSed0024779
SyntenySed0024779
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN44712.1 hypothetical protein Csa_016169 [Cucumis sativus]9.5e-2360.83Show/hide
Query:  MLRIRLFWFSVGFGATAASISQFVWRDLLAYRSVLSSDASFMERNLEALEARISNLESARIGNSISSAE-STHYLGHIRCWKVLGKLAYKILPFLALHPG
        MLR RLFWFS+GF  TAASIS FVWRDLLAYR  LSSDASFMER+ +ALEARISNLESAR  NS+SSAE +T    H+    VLG +AY     L L   
Subjt:  MLRIRLFWFSVGFGATAASISQFVWRDLLAYRSVLSSDASFMERNLEALEARISNLESARIGNSISSAE-STHYLGHIRCWKVLGKLAYKILPFLALHPG

Query:  HMADC-EMNLITHSHNREAM
         M DC   +L + +H REA+
Subjt:  HMADC-EMNLITHSHNREAM
XP_008447209.1 PREDICTED: uncharacterized protein LOC103489712 isoform X1 [Cucumis melo]3.5e-1773.33Show/hide
Query:  MLRIRLFWFSVGFGATAASISQFVWRDLLAYRSVLSSDASFMERNLEALEARISNLESARIGNSISSAESTHYLG
        MLR RLFWFS+GF  TAASISQFVWRDLLA+RS L SD   MERN +ALEARISNLES R  NSISSAE   + G
Subjt:  MLRIRLFWFSVGFGATAASISQFVWRDLLAYRSVLSSDASFMERNLEALEARISNLESARIGNSISSAESTHYLG
XP_022143614.1 uncharacterized protein LOC111013471 isoform X1 [Momordica charantia]1.4e-1877.78Show/hide
Query:  MLRIRLFWFSVGFGATAASISQFVWRDLLAYRSVLSSDASFMERNLEALEARISNLESARIGNSISSAESTH
        MLR RLFWFSVGFGA AASISQFVW+DLLAYRS LSSD   MERN +ALEARISNLES R  NS+SSAE  +
Subjt:  MLRIRLFWFSVGFGATAASISQFVWRDLLAYRSVLSSDASFMERNLEALEARISNLESARIGNSISSAESTH
XP_022143615.1 uncharacterized protein LOC111013471 isoform X2 [Momordica charantia]1.4e-1880Show/hide
Query:  MLRIRLFWFSVGFGATAASISQFVWRDLLAYRSVLSSDASFMERNLEALEARISNLESARIGNSISSAES
        MLR RLFWFSVGFGA AASISQFVW+DLLAYRS LSSD   MERN +ALEARISNLES R  NS+SSAE+
Subjt:  MLRIRLFWFSVGFGATAASISQFVWRDLLAYRSVLSSDASFMERNLEALEARISNLESARIGNSISSAES
XP_038897620.1 uncharacterized protein LOC120085616 isoform X3 [Benincasa hispida]4.6e-1777.14Show/hide
Query:  MLRIRLFWFSVGFGATAASISQFVWRDLLAYRSVLSSDASFMERNLEALEARISNLESARIGNSISSAES
        MLRIRLFWFS+GF AT+ASIS FVWRDLLA+R  LSSD   MERN EALEARISNLES R  NSI SAE+
Subjt:  MLRIRLFWFSVGFGATAASISQFVWRDLLAYRSVLSSDASFMERNLEALEARISNLESARIGNSISSAES
TrEMBL top hitse value%identityAlignment
A0A0A0K8L3 Uncharacterized protein4.6e-2360.83Show/hide
Query:  MLRIRLFWFSVGFGATAASISQFVWRDLLAYRSVLSSDASFMERNLEALEARISNLESARIGNSISSAE-STHYLGHIRCWKVLGKLAYKILPFLALHPG
        MLR RLFWFS+GF  TAASIS FVWRDLLAYR  LSSDASFMER+ +ALEARISNLESAR  NS+SSAE +T    H+    VLG +AY     L L   
Subjt:  MLRIRLFWFSVGFGATAASISQFVWRDLLAYRSVLSSDASFMERNLEALEARISNLESARIGNSISSAE-STHYLGHIRCWKVLGKLAYKILPFLALHPG

Query:  HMADC-EMNLITHSHNREAM
         M DC   +L + +H REA+
Subjt:  HMADC-EMNLITHSHNREAM
A0A1S3BGW3 uncharacterized protein LOC103489712 isoform X11.7e-1773.33Show/hide
Query:  MLRIRLFWFSVGFGATAASISQFVWRDLLAYRSVLSSDASFMERNLEALEARISNLESARIGNSISSAESTHYLG
        MLR RLFWFS+GF  TAASISQFVWRDLLA+RS L SD   MERN +ALEARISNLES R  NSISSAE   + G
Subjt:  MLRIRLFWFSVGFGATAASISQFVWRDLLAYRSVLSSDASFMERNLEALEARISNLESARIGNSISSAESTHYLG
A0A1S3BHI8 uncharacterized protein LOC103489712 isoform X32.2e-1777.14Show/hide
Query:  MLRIRLFWFSVGFGATAASISQFVWRDLLAYRSVLSSDASFMERNLEALEARISNLESARIGNSISSAES
        MLR RLFWFS+GF  TAASISQFVWRDLLA+RS L SD   MERN +ALEARISNLES R  NSISSAE+
Subjt:  MLRIRLFWFSVGFGATAASISQFVWRDLLAYRSVLSSDASFMERNLEALEARISNLESARIGNSISSAES
A0A6J1CP96 uncharacterized protein LOC111013471 isoform X26.9e-1980Show/hide
Query:  MLRIRLFWFSVGFGATAASISQFVWRDLLAYRSVLSSDASFMERNLEALEARISNLESARIGNSISSAES
        MLR RLFWFSVGFGA AASISQFVW+DLLAYRS LSSD   MERN +ALEARISNLES R  NS+SSAE+
Subjt:  MLRIRLFWFSVGFGATAASISQFVWRDLLAYRSVLSSDASFMERNLEALEARISNLESARIGNSISSAES
A0A6J1CPU7 uncharacterized protein LOC111013471 isoform X16.9e-1977.78Show/hide
Query:  MLRIRLFWFSVGFGATAASISQFVWRDLLAYRSVLSSDASFMERNLEALEARISNLESARIGNSISSAESTH
        MLR RLFWFSVGFGA AASISQFVW+DLLAYRS LSSD   MERN +ALEARISNLES R  NS+SSAE  +
Subjt:  MLRIRLFWFSVGFGATAASISQFVWRDLLAYRSVLSSDASFMERNLEALEARISNLESARIGNSISSAESTH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G07568.1 unknown protein2.9e-0950.79Show/hide
Query:  MLRIRLFWFSVGFGATAASISQFVWRDLLAYRSVLSSDASFMERNLEALEARISNLESARIGN
        MLR RL WF++GF  T  SI+  VWRDL A R  +SSD   M+    ALE R+S LES    N
Subjt:  MLRIRLFWFSVGFGATAASISQFVWRDLLAYRSVLSSDASFMERNLEALEARISNLESARIGN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAGAATTCGATTATTTTGGTTCAGTGTTGGATTTGGGGCCACAGCCGCTTCCATTTCTCAATTCGTCTGGAGAGATCTTTTGGCCTATCGATCTGTTCTTTCCTC
CGATGCAAGTTTTATGGAGCGGAATTTGGAAGCCCTAGAAGCTAGAATCTCGAATCTCGAGTCTGCTCGAATCGGGAATTCGATTTCATCTGCTGAGTCAACACATTACC
TTGGACACATCAGGTGTTGGAAAGTTTTGGGAAAATTGGCTTACAAGATCCTGCCATTTCTTGCCTTGCATCCTGGACATATGGCCGACTGTGAAATGAATCTTATCACA
CACTCTCACAACAGGGAAGCAATGGAATTCTTATCAACCTTTGTGCGGAAGAAACCAGTGTTAACTTCTTTTCTTTTTTTCCTCGATAAAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAGAATTCGATTATTTTGGTTCAGTGTTGGATTTGGGGCCACAGCCGCTTCCATTTCTCAATTCGTCTGGAGAGATCTTTTGGCCTATCGATCTGTTCTTTCCTC
CGATGCAAGTTTTATGGAGCGGAATTTGGAAGCCCTAGAAGCTAGAATCTCGAATCTCGAGTCTGCTCGAATCGGGAATTCGATTTCATCTGCTGAGTCAACACATTACC
TTGGACACATCAGGTGTTGGAAAGTTTTGGGAAAATTGGCTTACAAGATCCTGCCATTTCTTGCCTTGCATCCTGGACATATGGCCGACTGTGAAATGAATCTTATCACA
CACTCTCACAACAGGGAAGCAATGGAATTCTTATCAACCTTTGTGCGGAAGAAACCAGTGTTAACTTCTTTTCTTTTTTTCCTCGATAAAATTTGA
Protein sequenceShow/hide protein sequence
MLRIRLFWFSVGFGATAASISQFVWRDLLAYRSVLSSDASFMERNLEALEARISNLESARIGNSISSAESTHYLGHIRCWKVLGKLAYKILPFLALHPGHMADCEMNLIT
HSHNREAMEFLSTFVRKKPVLTSFLFFLDKI