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Sed0024841 (gene) of Chayote v1 genome

Gene IDSed0024841
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG03:10958722..10959087
RNA-Seq ExpressionSed0024841
SyntenySed0024841
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065168.1 hypothetical protein E6C27_scaffold82G005050 [Cucumis melo var. makuwa]4.6e-4273.6Show/hide
Query:  PKSNRANSFIIHVKNDQESYRGRNSAVSVSPARIMSRIRRILMRFVFYFPSRGSSSSATMAS-----KQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCI
        PKSN AN+F+IHVK+DQ+ YRG + A  +SPARIMSRIRR+LMRF+FY PSRGSS++A  A      KQ+NLEKFEPPKTSCSS+YSSYSHYNEAIADCI
Subjt:  PKSNRANSFIIHVKNDQESYRGRNSAVSVSPARIMSRIRRILMRFVFYFPSRGSSSSATMAS-----KQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCI

Query:  EFFNKSSQDQIGVEGNGISDVNEMV
        EFFNKSSQDQIGV+   ISD N MV
Subjt:  EFFNKSSQDQIGVEGNGISDVNEMV

KAE8652124.1 hypothetical protein Csa_022629 [Cucumis sativus]6.0e-4273.95Show/hide
Query:  PKSNRANSFIIHVKNDQESYRGRNSAVSVSPARIMSRIRRILMRFVFYFPSRGSSSSATMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNK
        PKSN ANSF++HVK+DQ+ YRG + A  +SPARI+SRIRR+ MRF+FY PSRGS+++A  A KQRNLEKFEPPKTSCSS+YSSYSHYNEAIADCIEF NK
Subjt:  PKSNRANSFIIHVKNDQESYRGRNSAVSVSPARIMSRIRRILMRFVFYFPSRGSSSSATMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNK

Query:  SSQDQIGVEGNGISDVNEM
        SSQDQIGV+   ISD N M
Subjt:  SSQDQIGVEGNGISDVNEM

KAG6598497.1 hypothetical protein SDJN03_08275, partial [Cucurbita argyrosperma subsp. sororia]2.3e-4178.69Show/hide
Query:  KSNRANSFIIHVKNDQESYRGRNSAVSVSPARIMSRIRRILMRFVFYFPSRG---SSSSATMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFF
        KSN ANSFII+V++DQE +RG +  VS+SPAR +SRIRRILMRF+FYFPSRG   SSSS+ MASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFF
Subjt:  KSNRANSFIIHVKNDQESYRGRNSAVSVSPARIMSRIRRILMRFVFYFPSRG---SSSSATMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFF

Query:  NKSSQDQIGVEGNGISDVNEMV
        NKSSQDQI     GISD N MV
Subjt:  NKSSQDQIGVEGNGISDVNEMV

KAG7029433.1 hypothetical protein SDJN02_07772, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-4178.69Show/hide
Query:  KSNRANSFIIHVKNDQESYRGRNSAVSVSPARIMSRIRRILMRFVFYFPSRG---SSSSATMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFF
        KSN ANSFII+V++DQE YRG +  VS+SPAR +SRIRRILMRF+FYFPSRG   SSSS+ MASK+RNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFF
Subjt:  KSNRANSFIIHVKNDQESYRGRNSAVSVSPARIMSRIRRILMRFVFYFPSRG---SSSSATMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFF

Query:  NKSSQDQIGVEGNGISDVNEMV
        NKSSQDQI     GISD N MV
Subjt:  NKSSQDQIGVEGNGISDVNEMV

XP_022996993.1 uncharacterized protein LOC111492057 [Cucurbita maxima]2.7e-4278.86Show/hide
Query:  PKSNRANSFIIHVKNDQESYRGRNSAVSVSPARIMSRIRRILMRFVFYFPSRGSS---SSATMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEF
        PKSN ANSFII+V++DQE YRG +  VS+SP R +SRIRRILMRF+FYFPSRGSS   SS+ MASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEF
Subjt:  PKSNRANSFIIHVKNDQESYRGRNSAVSVSPARIMSRIRRILMRFVFYFPSRGSS---SSATMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEF

Query:  FNKSSQDQIGVEGNGISDVNEMV
        FNKSSQDQI     GISD N MV
Subjt:  FNKSSQDQIGVEGNGISDVNEMV

TrEMBL top hitse value%identityAlignment
A0A0A0LPF9 Uncharacterized protein1.0e-4274.17Show/hide
Query:  PKSNRANSFIIHVKNDQESYRGRNSAVSVSPARIMSRIRRILMRFVFYFPSRGSSSSATMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNK
        PKSN ANSF++HVK+DQ+ YRG + A  +SPARI+SRIRR+ MRF+FY PSRGS+++A  A KQRNLEKFEPPKTSCSS+YSSYSHYNEAIADCIEF NK
Subjt:  PKSNRANSFIIHVKNDQESYRGRNSAVSVSPARIMSRIRRILMRFVFYFPSRGSSSSATMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNK

Query:  SSQDQIGVEGNGISDVNEMV
        SSQDQIGV+   ISD N MV
Subjt:  SSQDQIGVEGNGISDVNEMV

A0A5A7VC16 Uncharacterized protein2.2e-4273.6Show/hide
Query:  PKSNRANSFIIHVKNDQESYRGRNSAVSVSPARIMSRIRRILMRFVFYFPSRGSSSSATMAS-----KQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCI
        PKSN AN+F+IHVK+DQ+ YRG + A  +SPARIMSRIRR+LMRF+FY PSRGSS++A  A      KQ+NLEKFEPPKTSCSS+YSSYSHYNEAIADCI
Subjt:  PKSNRANSFIIHVKNDQESYRGRNSAVSVSPARIMSRIRRILMRFVFYFPSRGSSSSATMAS-----KQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCI

Query:  EFFNKSSQDQIGVEGNGISDVNEMV
        EFFNKSSQDQIGV+   ISD N MV
Subjt:  EFFNKSSQDQIGVEGNGISDVNEMV

A0A6A1UVD7 Uncharacterized protein2.4e-2052.63Show/hide
Query:  ANSFIIHVKNDQESYRGR--------NSAVSVSPARIMSRIRRILMRFVFYFPSRGSSSSATM-ASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIE
        A SF+I V+  +   R +        +S  + S  ++ +R R+ILMR +F  PSRGSS+++ M AS+Q+N ++FEPPKTSCSS YSS+SHYNEAIADCIE
Subjt:  ANSFIIHVKNDQESYRGR--------NSAVSVSPARIMSRIRRILMRFVFYFPSRGSSSSATM-ASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIE

Query:  FFNKSSQDQIGVEG
        FFNKSS D+I  +G
Subjt:  FFNKSSQDQIGVEG

A0A6J1CRC4 uncharacterized protein LOC1110140423.0e-3976.67Show/hide
Query:  KSNRANSFIIHVKNDQESYRGRNSAVSVSPARIMSRIRRILMRFVFYFPSRGSSSSATMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKS
        K N A+ F+IHV+ DQE YRG +S VS+SPARI+SRIRR+ MRF+FYFPSRGSSSS  MAS+QRNLEKFEPPKTSCSSNYSSYSHY+EAIADCIEFFNKS
Subjt:  KSNRANSFIIHVKNDQESYRGRNSAVSVSPARIMSRIRRILMRFVFYFPSRGSSSSATMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKS

Query:  S-QDQIGVEGNGISDVNEMV
        S Q+QIGV G   SD N MV
Subjt:  S-QDQIGVEGNGISDVNEMV

A0A6J1KCK5 uncharacterized protein LOC1114920571.3e-4278.86Show/hide
Query:  PKSNRANSFIIHVKNDQESYRGRNSAVSVSPARIMSRIRRILMRFVFYFPSRGSS---SSATMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEF
        PKSN ANSFII+V++DQE YRG +  VS+SP R +SRIRRILMRF+FYFPSRGSS   SS+ MASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEF
Subjt:  PKSNRANSFIIHVKNDQESYRGRNSAVSVSPARIMSRIRRILMRFVFYFPSRGSS---SSATMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEF

Query:  FNKSSQDQIGVEGNGISDVNEMV
        FNKSSQDQI     GISD N MV
Subjt:  FNKSSQDQIGVEGNGISDVNEMV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G75717.1 unknown protein5.9e-1149.3Show/hide
Query:  RIMSRIRRILMRFVFYFPSRGSSSSATMASKQRNLEKFEPPKTSCSSN-YSSYSHYNEAIADCIEFFNKSS
        ++  ++ +ILMR + +     S       S+  + E+FEPPK SCSS+ YSS+ HY+EAIADCIEFFNKSS
Subjt:  RIMSRIRRILMRFVFYFPSRGSSSSATMASKQRNLEKFEPPKTSCSSN-YSSYSHYNEAIADCIEFFNKSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAAATCAAACAGAGCAAACAGCTTCATCATTCACGTGAAGAACGATCAAGAATCGTACAGAGGAAGAAACTCCGCCGTGAGCGTCTCTCCGGCGAGGATTATGAG
CCGGATCCGCCGGATTCTGATGCGATTCGTCTTCTACTTTCCGTCTCGAGGTTCTTCGTCGTCGGCAACAATGGCGTCGAAGCAGAGAAACCTGGAGAAATTCGAGCCGC
CGAAGACTTCGTGCAGTTCGAATTACTCGTCGTACTCGCATTACAACGAAGCTATCGCCGATTGCATCGAGTTCTTCAACAAGTCGTCTCAGGATCAAATCGGCGTCGAA
GGTAACGGAATCTCTGATGTAAATGAAATGGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAAAATCAAACAGAGCAAACAGCTTCATCATTCACGTGAAGAACGATCAAGAATCGTACAGAGGAAGAAACTCCGCCGTGAGCGTCTCTCCGGCGAGGATTATGAG
CCGGATCCGCCGGATTCTGATGCGATTCGTCTTCTACTTTCCGTCTCGAGGTTCTTCGTCGTCGGCAACAATGGCGTCGAAGCAGAGAAACCTGGAGAAATTCGAGCCGC
CGAAGACTTCGTGCAGTTCGAATTACTCGTCGTACTCGCATTACAACGAAGCTATCGCCGATTGCATCGAGTTCTTCAACAAGTCGTCTCAGGATCAAATCGGCGTCGAA
GGTAACGGAATCTCTGATGTAAATGAAATGGTATGA
Protein sequenceShow/hide protein sequence
MPKSNRANSFIIHVKNDQESYRGRNSAVSVSPARIMSRIRRILMRFVFYFPSRGSSSSATMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIGVE
GNGISDVNEMV