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Sed0024850 (gene) of Chayote v1 genome

Gene IDSed0024850
OrganismSechium edule (Chayote v1)
DescriptionProlamin_like domain-containing protein
Genome locationLG09:4511871..4512272
RNA-Seq ExpressionSed0024850
SyntenySed0024850
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR008502 - Prolamin-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046835.1 hypothetical protein E6C27_scaffold216G001330 [Cucumis melo var. makuwa]6.4e-4570Show/hide
Query:  ILSWTIILATLAPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNLSKKELDLNCCVFVKFMGKSCAEAFTFWFDFPNLEALKPN
        IL + I L+ L   S   +DYNSPIW+GWVDEDRGYTLRPCLD +R+AKCQVELY YYFN+SKKELDLNCCVFVK MGK CA+AFTFW+ FP LE  +PN
Subjt:  ILSWTIILATLAPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNLSKKELDLNCCVFVKFMGKSCAEAFTFWFDFPNLEALKPN

Query:  PMMAYTNCVRRLYAPPPSKF
        PM  Y NC+ RL APPP+ F
Subjt:  PMMAYTNCVRRLYAPPPSKF

KAA0046841.1 hypothetical protein E6C27_scaffold216G001410 [Cucumis melo var. makuwa]1.9e-4162.96Show/hide
Query:  MTKKTSTVVTLMGILSWTIILATLAPRSMA--ADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNLSKKELDLNCCVFVKFMGKSCAEAF
        M   T+TV  ++ IL   + LA L   SMA   DDYNSPIWNGWVDEDR   LRPCLDM+++AKCQV+LY YYFN+SKKELDL CCVFVK MGK CA AF
Subjt:  MTKKTSTVVTLMGILSWTIILATLAPRSMA--ADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNLSKKELDLNCCVFVKFMGKSCAEAF

Query:  TFWFDFPNLEALKPNPMMAYTNCVRRLYAPPPSKF
          W++FP LE  +PNPM+ Y NCV RL A PP+ F
Subjt:  TFWFDFPNLEALKPNPMMAYTNCVRRLYAPPPSKF

KAE8646662.1 hypothetical protein Csa_004797, partial [Cucumis sativus]1.7e-3464.29Show/hide
Query:  KTSTVVTLMGILSWTIILATLAPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNLSKKELDLNCCVFVKFMGKSCAEAFTFWFD
        KT+ +  ++ +LS TI LA L       +DYNS IWN W+DEDR +TLRPCLD +R+AKCQVELY YYFN+SK+ELDLNCCVFVK MGK CA+AFTFW+ 
Subjt:  KTSTVVTLMGILSWTIILATLAPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNLSKKELDLNCCVFVKFMGKSCAEAFTFWFD

Query:  FPNLEALKPNPM
        FP LE  +PNPM
Subjt:  FPNLEALKPNPM

KAG6578867.1 hypothetical protein SDJN03_23315, partial [Cucurbita argyrosperma subsp. sororia]6.2e-4068.03Show/hide
Query:  MGILSWTIILATLAPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNLSKKELDLNCCVFVKFMGKSCAEAFTFWFDFPNLEALK
        M IL   I LA LA  S A DDYNSPIW+ WVDEDRG  LRPCLDM+++AKCQVELY YYFN+SKKELDLNCCVFVK MGK CA AF  WF FP  E  +
Subjt:  MGILSWTIILATLAPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNLSKKELDLNCCVFVKFMGKSCAEAFTFWFDFPNLEALK

Query:  PNPMMAYTNCVRRLYAPPPSKF
         NPM  Y NCV RL A PP+ F
Subjt:  PNPMMAYTNCVRRLYAPPPSKF

KGN50979.1 hypothetical protein Csa_008880 [Cucumis sativus]3.9e-3457.03Show/hide
Query:  STVVTLMGILSWTIILATLA--PRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNLSKKELDLNCCVFVKFMGKSCAEAFTFWFD
        ST V L+ ++   +++ +LA    S   D+  S IW+ W+DEDR  TL PCL M+R+ KCQVELY YYFN+SKKELDL+CCV+V +MGK CA AF FWF 
Subjt:  STVVTLMGILSWTIILATLA--PRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNLSKKELDLNCCVFVKFMGKSCAEAFTFWFD

Query:  FPNLEALKPNPMMAYTNCVRRLYAPPPS
        FP+LEALKPNPM  Y NC +RL  P P+
Subjt:  FPNLEALKPNPMMAYTNCVRRLYAPPPS

TrEMBL top hitse value%identityAlignment
A0A0A0KEB8 Prolamin_like domain-containing protein5.5e-4263.36Show/hide
Query:  MTKKTSTVVTLMGILSWTIILATLAPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNLSKKELDLNCCVFVKFMGKSCAEAFTF
        M  KT+ +  ++ +LS  I LA L   S   +DYNS IWN W+DEDR +TLRPCLD +R+AKCQVELY YYFN+SKKELDLNCCVFVK MGK CA+AFTF
Subjt:  MTKKTSTVVTLMGILSWTIILATLAPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNLSKKELDLNCCVFVKFMGKSCAEAFTF

Query:  WFDFPNLEALKPNPMMAYTNCVRRLYAPPPS
        W+ FP LE  +PNPM  Y NC  RL APPP+
Subjt:  WFDFPNLEALKPNPMMAYTNCVRRLYAPPPS

A0A0A0KQ41 Prolamin_like domain-containing protein1.9e-3457.03Show/hide
Query:  STVVTLMGILSWTIILATLA--PRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNLSKKELDLNCCVFVKFMGKSCAEAFTFWFD
        ST V L+ ++   +++ +LA    S   D+  S IW+ W+DEDR  TL PCL M+R+ KCQVELY YYFN+SKKELDL+CCV+V +MGK CA AF FWF 
Subjt:  STVVTLMGILSWTIILATLA--PRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNLSKKELDLNCCVFVKFMGKSCAEAFTFWFD

Query:  FPNLEALKPNPMMAYTNCVRRLYAPPPS
        FP+LEALKPNPM  Y NC +RL  P P+
Subjt:  FPNLEALKPNPMMAYTNCVRRLYAPPPS

A0A0A0L535 Prolamin_like domain-containing protein4.2e-2646.56Show/hide
Query:  TKKTSTVVTLMGILSWTII--LATLAPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNLSKKELDLNCCVFVKFMGKSCAEAFT
        T  ++  + L+ +LS  ++  LA + P S+  D+  S IW+GW+D+DR   L  CL ++++ KCQVELY YYFN SKKE+DL+CCV+V ++G+ CA +F 
Subjt:  TKKTSTVVTLMGILSWTII--LATLAPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNLSKKELDLNCCVFVKFMGKSCAEAFT

Query:  FWFDFPNLEALKPNPMMAYTNCVRRLYAPPP
         WF     +ALKPNPM  Y NC +RL  P P
Subjt:  FWFDFPNLEALKPNPMMAYTNCVRRLYAPPP

A0A5A7TZR1 Prolamin_like domain-containing protein9.3e-4262.96Show/hide
Query:  MTKKTSTVVTLMGILSWTIILATLAPRSMA--ADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNLSKKELDLNCCVFVKFMGKSCAEAF
        M   T+TV  ++ IL   + LA L   SMA   DDYNSPIWNGWVDEDR   LRPCLDM+++AKCQV+LY YYFN+SKKELDL CCVFVK MGK CA AF
Subjt:  MTKKTSTVVTLMGILSWTIILATLAPRSMA--ADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNLSKKELDLNCCVFVKFMGKSCAEAF

Query:  TFWFDFPNLEALKPNPMMAYTNCVRRLYAPPPSKF
          W++FP LE  +PNPM+ Y NCV RL A PP+ F
Subjt:  TFWFDFPNLEALKPNPMMAYTNCVRRLYAPPPSKF

A0A5D3C280 Prolamin_like domain-containing protein3.1e-4570Show/hide
Query:  ILSWTIILATLAPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNLSKKELDLNCCVFVKFMGKSCAEAFTFWFDFPNLEALKPN
        IL + I L+ L   S   +DYNSPIW+GWVDEDRGYTLRPCLD +R+AKCQVELY YYFN+SKKELDLNCCVFVK MGK CA+AFTFW+ FP LE  +PN
Subjt:  ILSWTIILATLAPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNLSKKELDLNCCVFVKFMGKSCAEAFTFWFDFPNLEALKPN

Query:  PMMAYTNCVRRLYAPPPSKF
        PM  Y NC+ RL APPP+ F
Subjt:  PMMAYTNCVRRLYAPPPSKF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAAGAAAACCAGCACAGTGGTGACATTAATGGGGATTCTCTCATGGACAATAATTTTGGCAACCTTAGCTCCACGCTCGATGGCCGCCGACGATTACAATTCACC
TATATGGAATGGATGGGTAGACGAGGATAGAGGATACACCTTACGACCATGTTTGGATATGATAAGGAATGCAAAATGTCAGGTGGAACTTTACAAGTACTACTTCAATT
TAAGTAAGAAAGAATTGGATCTAAATTGTTGCGTTTTCGTTAAATTCATGGGGAAGAGTTGTGCTGAAGCTTTTACTTTTTGGTTTGACTTTCCAAATTTGGAAGCCTTG
AAACCTAATCCCATGATGGCATATACAAATTGTGTTAGAAGACTTTATGCTCCCCCACCTTCGAAATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAAAGAAAACCAGCACAGTGGTGACATTAATGGGGATTCTCTCATGGACAATAATTTTGGCAACCTTAGCTCCACGCTCGATGGCCGCCGACGATTACAATTCACC
TATATGGAATGGATGGGTAGACGAGGATAGAGGATACACCTTACGACCATGTTTGGATATGATAAGGAATGCAAAATGTCAGGTGGAACTTTACAAGTACTACTTCAATT
TAAGTAAGAAAGAATTGGATCTAAATTGTTGCGTTTTCGTTAAATTCATGGGGAAGAGTTGTGCTGAAGCTTTTACTTTTTGGTTTGACTTTCCAAATTTGGAAGCCTTG
AAACCTAATCCCATGATGGCATATACAAATTGTGTTAGAAGACTTTATGCTCCCCCACCTTCGAAATTTTAA
Protein sequenceShow/hide protein sequence
MTKKTSTVVTLMGILSWTIILATLAPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNLSKKELDLNCCVFVKFMGKSCAEAFTFWFDFPNLEAL
KPNPMMAYTNCVRRLYAPPPSKF