; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0024869 (gene) of Chayote v1 genome

Gene IDSed0024869
OrganismSechium edule (Chayote v1)
Descriptionmethyl-CpG-binding domain-containing protein 5-like
Genome locationLG13:19341358..19344095
RNA-Seq ExpressionSed0024869
SyntenySed0024869
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001739 - Methyl-CpG DNA binding
IPR016177 - DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036930.1 Methyl-CpG-binding domain-containing protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-7867.69Show/hide
Query:  MSASGTASFHDPTRPGLTSSSSS-AAAHHLPPDPLLSSGAFIHSSSSSA--------------RNHR---------RSPFLAEPLNGKKLPPD--PPGNG
        MSASGT SF DP  P   S+     + HH PPDPLLSSG+FI SS++                 NHR         RSP   +PLN KKLPPD   PGNG
Subjt:  MSASGTASFHDPTRPGLTSSSSS-AAAHHLPPDPLLSSGAFIHSSSSSA--------------RNHR---------RSPFLAEPLNGKKLPPD--PPGNG

Query:  DSPAAKKAPASRNSNASPKSAPLERPDWLPPGWVLEDRVRTSGATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGT-RKRKKDGNAAPADGSEEHKSKKS
        DS A KK  ASR ++ASPKSA  ERP+WLPPGWV+EDRVR SGATAGTVDKYYFDP SG RFRSKIEVLYFLETGT RKRKK  +   ADGSEE KSKKS
Subjt:  DSPAAKKAPASRNSNASPKSAPLERPDWLPPGWVLEDRVRTSGATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGT-RKRKKDGNAAPADGSEEHKSKKS

Query:  SSKAKPAPLNFNYFNVPEKVEWVLTDPSQETWTPFINNEKVPESTKSEWVGAFYLLGRSK
        SS AK APLNF++FNVPEKVEWVLTDPSQE WTPFINNEKVPESTK EWV AF LLGRSK
Subjt:  SSKAKPAPLNFNYFNVPEKVEWVLTDPSQETWTPFINNEKVPESTKSEWVGAFYLLGRSK

XP_022948610.1 methyl-CpG-binding domain-containing protein 5-like isoform X1 [Cucurbita moschata]4.8e-8068.7Show/hide
Query:  MSASGTASFHDPTRPGLTSSSSS-AAAHHLPPDPLLSSGAFIHSSSSSA--------------RNHR---------RSPFLAEPLNGKKLPPD--PPGNG
        MSASGT SF DP  P   S+     + HH PPDPLLSSG+FI SS++                 NHR         RSP  A+PLN KKLPPD   PGNG
Subjt:  MSASGTASFHDPTRPGLTSSSSS-AAAHHLPPDPLLSSGAFIHSSSSSA--------------RNHR---------RSPFLAEPLNGKKLPPD--PPGNG

Query:  DSPAAKKAPASRNSNASPKSAPLERPDWLPPGWVLEDRVRTSGATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGT-RKRKK--DGNAAPADGSEEHKSK
        DS A KK  ASR ++ASPKSA  ERP+WLPPGWV+EDRVR SGATAGTVDKYYFDP SG RFRSKIEVLYFLETGT RKRKK  DGN   ADGSEE KSK
Subjt:  DSPAAKKAPASRNSNASPKSAPLERPDWLPPGWVLEDRVRTSGATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGT-RKRKK--DGNAAPADGSEEHKSK

Query:  KSSSKAKPAPLNFNYFNVPEKVEWVLTDPSQETWTPFINNEKVPESTKSEWVGAFYLLGRSK
        KSSS AK APLNF++FNVPEKVEWVLTDPSQE WTPFINNEKVPESTK EWV AF LLGRSK
Subjt:  KSSSKAKPAPLNFNYFNVPEKVEWVLTDPSQETWTPFINNEKVPESTKSEWVGAFYLLGRSK

XP_022948611.1 methyl-CpG-binding domain-containing protein 5-like isoform X2 [Cucurbita moschata]5.4e-7968.08Show/hide
Query:  MSASGTASFHDPTRPGLTSSSSS-AAAHHLPPDPLLSSGAFIHSSSSSA--------------RNHR---------RSPFLAEPLNGKKLPPD--PPGNG
        MSASGT SF DP  P   S+     + HH PPDPLLSSG+FI SS++                 NHR         RSP  A+PLN KKLPPD   PGNG
Subjt:  MSASGTASFHDPTRPGLTSSSSS-AAAHHLPPDPLLSSGAFIHSSSSSA--------------RNHR---------RSPFLAEPLNGKKLPPD--PPGNG

Query:  DSPAAKKAPASRNSNASPKSAPLERPDWLPPGWVLEDRVRTSGATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGT-RKRKKDGNAAPADGSEEHKSKKS
        DS A KK  ASR ++ASPKSA  ERP+WLPPGWV+EDRVR SGATAGTVDKYYFDP SG RFRSKIEVLYFLETGT RKRKK  +   ADGSEE KSKKS
Subjt:  DSPAAKKAPASRNSNASPKSAPLERPDWLPPGWVLEDRVRTSGATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGT-RKRKKDGNAAPADGSEEHKSKKS

Query:  SSKAKPAPLNFNYFNVPEKVEWVLTDPSQETWTPFINNEKVPESTKSEWVGAFYLLGRSK
        SS AK APLNF++FNVPEKVEWVLTDPSQE WTPFINNEKVPESTK EWV AF LLGRSK
Subjt:  SSKAKPAPLNFNYFNVPEKVEWVLTDPSQETWTPFINNEKVPESTKSEWVGAFYLLGRSK

XP_022998335.1 methyl-CpG-binding domain-containing protein 5-like isoform X1 [Cucurbita maxima]2.4e-7968.32Show/hide
Query:  MSASGTASFHDPTRPGLTSSSSS-AAAHHLPPDPLLSSGAFIHSSSSSA--------------RNHR---------RSPFLAEPLNGKKLPPD--PPGNG
        MSASGT SF DP  P   S+     + HH PPDPLLSSG+FI SS++                 NHR         RSP  A+PLN KKL PD   PGNG
Subjt:  MSASGTASFHDPTRPGLTSSSSS-AAAHHLPPDPLLSSGAFIHSSSSSA--------------RNHR---------RSPFLAEPLNGKKLPPD--PPGNG

Query:  DSPAAKKAPASRNSNASPKSAPLERPDWLPPGWVLEDRVRTSGATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGT-RKRKK--DGNAAPADGSEEHKSK
        DS A KK  ASR ++ASPKSA  +RP+WLPPGWV+EDRVR SGATAGTVDKYYFDP SG RFRSKIEVLYFLETGT RKRKK  DGNA  ADGSEE KSK
Subjt:  DSPAAKKAPASRNSNASPKSAPLERPDWLPPGWVLEDRVRTSGATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGT-RKRKK--DGNAAPADGSEEHKSK

Query:  KSSSKAKPAPLNFNYFNVPEKVEWVLTDPSQETWTPFINNEKVPESTKSEWVGAFYLLGRSK
        KSSS AK APLNF++FNVPEKVEWVLTDPSQE WTPFINNEKVPESTK EWV AF LLGRSK
Subjt:  KSSSKAKPAPLNFNYFNVPEKVEWVLTDPSQETWTPFINNEKVPESTKSEWVGAFYLLGRSK

XP_023523162.1 methyl-CpG-binding domain-containing protein 5-like [Cucurbita pepo subsp. pepo]1.6e-7868.46Show/hide
Query:  MSASGTASFHDPTRPGLTSSSSS-AAAHHLPPDPLLSSGAFIHSSSSS----------ARN----HR---------RSPFLAEPLNGKKLPPD--PPGNG
        MSASGT SF DP  P   S+     + HH PPDPLLSSG+FI SS++           AR+    HR         RSP  A+PLN KKLPPD   PGNG
Subjt:  MSASGTASFHDPTRPGLTSSSSS-AAAHHLPPDPLLSSGAFIHSSSSS----------ARN----HR---------RSPFLAEPLNGKKLPPD--PPGNG

Query:  DSPAAKKAPASRNSNASPKSAPLERPDWLPPGWVLEDRVRTSGATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGT-RKRKKDGNAAPADGSEEHKSKKS
        DS A KK  ASR ++ASPKSA  ERP+WLPPGWV+EDRVR SGATAGTVDKYYFDP SG RFRSKIEVLYFLETGT RKRKK  +   ADGSEE KSKKS
Subjt:  DSPAAKKAPASRNSNASPKSAPLERPDWLPPGWVLEDRVRTSGATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGT-RKRKKDGNAAPADGSEEHKSKKS

Query:  SSKAKPAPLNFNYFNVPEKVEWVLTDPSQETWTPFINNEKVPESTKSEWVGAFYLLGRSK
        SS AK APLNF++FNVPEKVEWVLTDPSQE WTPFINNEKVPESTK EWV AF LLGRSK
Subjt:  SSKAKPAPLNFNYFNVPEKVEWVLTDPSQETWTPFINNEKVPESTKSEWVGAFYLLGRSK

TrEMBL top hitse value%identityAlignment
A0A6J1DQR2 methyl-CpG-binding domain-containing protein 5-like3.3e-7465.27Show/hide
Query:  MSASGTA------SFHDPTRPGLTSSSSSAAAHHLPPDPLLSSGAFIHSSSSSARNH-----------------RRSPFLAE--PLNGKKLPPD--PPGN
        MSASGT+         DPTRP L S         LPPDPLL  G+FI  +SS+AR H                 RRSP  AE  PLNG+KLPPD   PGN
Subjt:  MSASGTA------SFHDPTRPGLTSSSSSAAAHHLPPDPLLSSGAFIHSSSSSARNH-----------------RRSPFLAE--PLNGKKLPPD--PPGN

Query:  GDSPAAKKAPASR-NSNASPKSAPLERPDWLPPGWVLEDRVRTSGATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGT-RKRKKDGNAAPADGSEEHKSK
        GDSPA +K  AS+   +ASPKS P ERP+WLPPGWV++DRVR SGATAGTVDKYYFDPTSG RFRSKIEVLYFLETGT RKRKKD  A   DGSEE K+K
Subjt:  GDSPAAKKAPASR-NSNASPKSAPLERPDWLPPGWVLEDRVRTSGATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGT-RKRKKDGNAAPADGSEEHKSK

Query:  KSSSKAKPAPLNFNYFNVPEKVEWVLTDPSQETWTPFINNEKVPESTKSEWVGAFYLLGRSK
        KSS  AK A LNF++ NVPEKVEWVLTDPS+E WTP+I+NEKVPESTK EWVGAF LLGRSK
Subjt:  KSSSKAKPAPLNFNYFNVPEKVEWVLTDPSQETWTPFINNEKVPESTKSEWVGAFYLLGRSK

A0A6J1G9P7 methyl-CpG-binding domain-containing protein 5-like isoform X22.6e-7968.08Show/hide
Query:  MSASGTASFHDPTRPGLTSSSSS-AAAHHLPPDPLLSSGAFIHSSSSSA--------------RNHR---------RSPFLAEPLNGKKLPPD--PPGNG
        MSASGT SF DP  P   S+     + HH PPDPLLSSG+FI SS++                 NHR         RSP  A+PLN KKLPPD   PGNG
Subjt:  MSASGTASFHDPTRPGLTSSSSS-AAAHHLPPDPLLSSGAFIHSSSSSA--------------RNHR---------RSPFLAEPLNGKKLPPD--PPGNG

Query:  DSPAAKKAPASRNSNASPKSAPLERPDWLPPGWVLEDRVRTSGATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGT-RKRKKDGNAAPADGSEEHKSKKS
        DS A KK  ASR ++ASPKSA  ERP+WLPPGWV+EDRVR SGATAGTVDKYYFDP SG RFRSKIEVLYFLETGT RKRKK  +   ADGSEE KSKKS
Subjt:  DSPAAKKAPASRNSNASPKSAPLERPDWLPPGWVLEDRVRTSGATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGT-RKRKKDGNAAPADGSEEHKSKKS

Query:  SSKAKPAPLNFNYFNVPEKVEWVLTDPSQETWTPFINNEKVPESTKSEWVGAFYLLGRSK
        SS AK APLNF++FNVPEKVEWVLTDPSQE WTPFINNEKVPESTK EWV AF LLGRSK
Subjt:  SSKAKPAPLNFNYFNVPEKVEWVLTDPSQETWTPFINNEKVPESTKSEWVGAFYLLGRSK

A0A6J1GAC7 methyl-CpG-binding domain-containing protein 5-like isoform X12.3e-8068.7Show/hide
Query:  MSASGTASFHDPTRPGLTSSSSS-AAAHHLPPDPLLSSGAFIHSSSSSA--------------RNHR---------RSPFLAEPLNGKKLPPD--PPGNG
        MSASGT SF DP  P   S+     + HH PPDPLLSSG+FI SS++                 NHR         RSP  A+PLN KKLPPD   PGNG
Subjt:  MSASGTASFHDPTRPGLTSSSSS-AAAHHLPPDPLLSSGAFIHSSSSSA--------------RNHR---------RSPFLAEPLNGKKLPPD--PPGNG

Query:  DSPAAKKAPASRNSNASPKSAPLERPDWLPPGWVLEDRVRTSGATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGT-RKRKK--DGNAAPADGSEEHKSK
        DS A KK  ASR ++ASPKSA  ERP+WLPPGWV+EDRVR SGATAGTVDKYYFDP SG RFRSKIEVLYFLETGT RKRKK  DGN   ADGSEE KSK
Subjt:  DSPAAKKAPASRNSNASPKSAPLERPDWLPPGWVLEDRVRTSGATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGT-RKRKK--DGNAAPADGSEEHKSK

Query:  KSSSKAKPAPLNFNYFNVPEKVEWVLTDPSQETWTPFINNEKVPESTKSEWVGAFYLLGRSK
        KSSS AK APLNF++FNVPEKVEWVLTDPSQE WTPFINNEKVPESTK EWV AF LLGRSK
Subjt:  KSSSKAKPAPLNFNYFNVPEKVEWVLTDPSQETWTPFINNEKVPESTKSEWVGAFYLLGRSK

A0A6J1K9Z4 methyl-CpG-binding domain-containing protein 5-like isoform X23.7e-7867.31Show/hide
Query:  MSASGTASFHDPTRPGLTSSSSS-AAAHHLPPDPLLSSGAFIHSSSSSA--------------RNHR---------RSPFLAEPLNGKKLPPD--PPGNG
        MSASGT SF DP  P   S+     + HH PPDPLLSSG+FI SS++                 NHR         RSP  A+PLN KKL PD   PGNG
Subjt:  MSASGTASFHDPTRPGLTSSSSS-AAAHHLPPDPLLSSGAFIHSSSSSA--------------RNHR---------RSPFLAEPLNGKKLPPD--PPGNG

Query:  DSPAAKKAPASRNSNASPKSAPLERPDWLPPGWVLEDRVRTSGATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGT-RKRKKDGNAAPADGSEEHKSKKS
        DS A KK  ASR ++ASPKSA  +RP+WLPPGWV+EDRVR SGATAGTVDKYYFDP SG RFRSKIEVLYFLETGT RKRKK  +   ADGSEE KSKKS
Subjt:  DSPAAKKAPASRNSNASPKSAPLERPDWLPPGWVLEDRVRTSGATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGT-RKRKKDGNAAPADGSEEHKSKKS

Query:  SSKAKPAPLNFNYFNVPEKVEWVLTDPSQETWTPFINNEKVPESTKSEWVGAFYLLGRSK
        SS AK APLNF++FNVPEKVEWVLTDPSQE WTPFINNEKVPESTK EWV AF LLGRSK
Subjt:  SSKAKPAPLNFNYFNVPEKVEWVLTDPSQETWTPFINNEKVPESTKSEWVGAFYLLGRSK

A0A6J1KC76 methyl-CpG-binding domain-containing protein 5-like isoform X11.2e-7968.32Show/hide
Query:  MSASGTASFHDPTRPGLTSSSSS-AAAHHLPPDPLLSSGAFIHSSSSSA--------------RNHR---------RSPFLAEPLNGKKLPPD--PPGNG
        MSASGT SF DP  P   S+     + HH PPDPLLSSG+FI SS++                 NHR         RSP  A+PLN KKL PD   PGNG
Subjt:  MSASGTASFHDPTRPGLTSSSSS-AAAHHLPPDPLLSSGAFIHSSSSSA--------------RNHR---------RSPFLAEPLNGKKLPPD--PPGNG

Query:  DSPAAKKAPASRNSNASPKSAPLERPDWLPPGWVLEDRVRTSGATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGT-RKRKK--DGNAAPADGSEEHKSK
        DS A KK  ASR ++ASPKSA  +RP+WLPPGWV+EDRVR SGATAGTVDKYYFDP SG RFRSKIEVLYFLETGT RKRKK  DGNA  ADGSEE KSK
Subjt:  DSPAAKKAPASRNSNASPKSAPLERPDWLPPGWVLEDRVRTSGATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGT-RKRKK--DGNAAPADGSEEHKSK

Query:  KSSSKAKPAPLNFNYFNVPEKVEWVLTDPSQETWTPFINNEKVPESTKSEWVGAFYLLGRSK
        KSSS AK APLNF++FNVPEKVEWVLTDPSQE WTPFINNEKVPESTK EWV AF LLGRSK
Subjt:  KSSSKAKPAPLNFNYFNVPEKVEWVLTDPSQETWTPFINNEKVPESTKSEWVGAFYLLGRSK

SwissProt top hitse value%identityAlignment
Q9LTJ1 Methyl-CpG-binding domain-containing protein 65.3e-2938.71Show/hide
Query:  SSAAAHHLPPDPLLSSGAFIHSSSSSARNHRRSPFLAEPLNGKKLPPDPPGNGDSPAAKKAPASRNSNASPKSAPLER----PDWLPPGWVLEDRVRTSG
        S + A   PPDPLL+SGAFI S+     +   S     P+ G        G+G+S     A  +   N   +S   +R     +WLPPGW +ED++RTSG
Subjt:  SSAAAHHLPPDPLLSSGAFIHSSSSSARNHRRSPFLAEPLNGKKLPPDPPGNGDSPAAKKAPASRNSNASPKSAPLER----PDWLPPGWVLEDRVRTSG

Query:  ATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGTRKR---KKDGNAAPADGSEEHKSKKSSSKA-----KPAPLNFNYFNVPEKVEWVLTDPSQETWTPFI
        ATAG+VDKYY++P +G +FRS+ EVLY+LE GT KR   K +      D  E   S + +  A      P PL+F++ N P+KV W + +  +E W P I
Subjt:  ATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGTRKR---KKDGNAAPADGSEEHKSKKSSSKA-----KPAPLNFNYFNVPEKVEWVLTDPSQETWTPFI

Query:  NNEKVPESTKSEWVGAF
         + KV +S + +W  AF
Subjt:  NNEKVPESTKSEWVGAF

Q9SNC0 Methyl-CpG-binding domain-containing protein 52.4e-2941.85Show/hide
Query:  NGKKLPPDPPGNGDSPAAKKAPASRNSNASPKSAPLERPDWLPPGWVLEDRVRTSGATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGTRKRKKDGNAAP
        NG      PP N         PA+   + S K A     +WLPP W  E RVRTSG  AGTVDK+Y++P +G +FRSK EVLY+LE GT K+K    A  
Subjt:  NGKKLPPDPPGNGDSPAAKKAPASRNSNASPKSAPLERPDWLPPGWVLEDRVRTSGATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGTRKRKKDGNAAP

Query:  ADGSEEH-----------KSKKSSSKAKPAPLNFNYFNVPEKVEWVLTDPSQETWTPFINNEKVPESTKSEWVGAFYLLGRSKA
         D   EH           KS K  ++  P PLNF++ NVPEKV W   + S+E W PFI + K+ ES   +W   F L+    A
Subjt:  ADGSEEH-----------KSKKSSSKAKPAPLNFNYFNVPEKVEWVLTDPSQETWTPFINNEKVPESTKSEWVGAFYLLGRSKA

Q9UBB5 Methyl-CpG-binding domain protein 22.0e-0433.04Show/hide
Query:  PAAKKAPASRNSNASPKSAPLERPDWLPPGWVLEDRVRTSGATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGTRKRKKD---GNAAPADGSEEHKSKKS
        P+    P  R   A+     ++ P  LPPGW  E+ +R SG +AG  D YYF P SG +FRSK ++  +L         D   G   P+      K +K+
Subjt:  PAAKKAPASRNSNASPKSAPLERPDWLPPGWVLEDRVRTSGATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGTRKRKKD---GNAAPADGSEEHKSKKS

Query:  SSKAKPAPLNFN
          + +  PLN N
Subjt:  SSKAKPAPLNFN

Q9Z2E1 Methyl-CpG-binding domain protein 29.1e-0533.04Show/hide
Query:  PAAKKAPASRNSNASPKSAPLERPDWLPPGWVLEDRVRTSGATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGTRKRKKD---GNAAPADGSEEHKSKKS
        P+    P  R   A+     ++ P  LPPGW  E+ +R SG +AG  D YYF P SG +FRSK ++  +L         D   G   P+      K +K+
Subjt:  PAAKKAPASRNSNASPKSAPLERPDWLPPGWVLEDRVRTSGATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGTRKRKKD---GNAAPADGSEEHKSKKS

Query:  SSKAKPAPLNFN
          + +  PLN N
Subjt:  SSKAKPAPLNFN

Arabidopsis top hitse value%identityAlignment
AT3G46580.1 methyl-CPG-binding domain protein 51.7e-3041.85Show/hide
Query:  NGKKLPPDPPGNGDSPAAKKAPASRNSNASPKSAPLERPDWLPPGWVLEDRVRTSGATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGTRKRKKDGNAAP
        NG      PP N         PA+   + S K A     +WLPP W  E RVRTSG  AGTVDK+Y++P +G +FRSK EVLY+LE GT K+K    A  
Subjt:  NGKKLPPDPPGNGDSPAAKKAPASRNSNASPKSAPLERPDWLPPGWVLEDRVRTSGATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGTRKRKKDGNAAP

Query:  ADGSEEH-----------KSKKSSSKAKPAPLNFNYFNVPEKVEWVLTDPSQETWTPFINNEKVPESTKSEWVGAFYLLGRSKA
         D   EH           KS K  ++  P PLNF++ NVPEKV W   + S+E W PFI + K+ ES   +W   F L+    A
Subjt:  ADGSEEH-----------KSKKSSSKAKPAPLNFNYFNVPEKVEWVLTDPSQETWTPFINNEKVPESTKSEWVGAFYLLGRSKA

AT5G59380.1 methyl-CPG-binding domain 63.8e-3038.71Show/hide
Query:  SSAAAHHLPPDPLLSSGAFIHSSSSSARNHRRSPFLAEPLNGKKLPPDPPGNGDSPAAKKAPASRNSNASPKSAPLER----PDWLPPGWVLEDRVRTSG
        S + A   PPDPLL+SGAFI S+     +   S     P+ G        G+G+S     A  +   N   +S   +R     +WLPPGW +ED++RTSG
Subjt:  SSAAAHHLPPDPLLSSGAFIHSSSSSARNHRRSPFLAEPLNGKKLPPDPPGNGDSPAAKKAPASRNSNASPKSAPLER----PDWLPPGWVLEDRVRTSG

Query:  ATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGTRKR---KKDGNAAPADGSEEHKSKKSSSKA-----KPAPLNFNYFNVPEKVEWVLTDPSQETWTPFI
        ATAG+VDKYY++P +G +FRS+ EVLY+LE GT KR   K +      D  E   S + +  A      P PL+F++ N P+KV W + +  +E W P I
Subjt:  ATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGTRKR---KKDGNAAPADGSEEHKSKKSSSKA-----KPAPLNFNYFNVPEKVEWVLTDPSQETWTPFI

Query:  NNEKVPESTKSEWVGAF
         + KV +S + +W  AF
Subjt:  NNEKVPESTKSEWVGAF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCTTCTGGAACAGCTTCGTTTCACGACCCGACCCGACCCGGCTTGACTTCCTCCTCCTCCTCCGCCGCCGCCCACCACCTCCCGCCGGATCCTCTCCTCTCCTC
CGGCGCCTTCATCCACTCCTCCTCCTCCTCCGCCCGCAATCATCGCCGATCTCCATTCCTCGCCGAGCCTCTCAACGGTAAGAAACTCCCTCCAGATCCGCCTGGAAATG
GAGATTCTCCGGCGGCTAAGAAGGCTCCGGCCTCCAGAAATTCCAACGCCTCTCCGAAATCTGCACCGTTGGAAAGGCCTGATTGGCTGCCGCCGGGCTGGGTGCTGGAA
GATAGAGTTCGGACCTCCGGTGCTACCGCCGGAACAGTGGATAAGTACTACTTTGACCCAACCTCGGGCCATCGATTCCGGTCTAAGATTGAGGTTCTTTACTTTCTAGA
AACAGGAACAAGGAAACGGAAGAAAGATGGTAATGCAGCGCCTGCTGATGGCTCTGAAGAACACAAGAGCAAGAAGTCTTCAAGCAAAGCTAAACCTGCTCCTTTAAACT
TTAATTACTTCAATGTGCCTGAAAAGGTTGAGTGGGTTCTCACAGACCCTTCTCAGGAGACTTGGACGCCATTTATCAACAATGAGAAAGTGCCCGAGTCTACAAAGAGC
GAATGGGTGGGAGCTTTTTATCTCCTCGGCCGATCGAAAGCAATTTGA
mRNA sequenceShow/hide mRNA sequence
GAAATGGGTTGTTGTTATTATTGCAAAGTGGCAACGACAATAAATAATCTCTCCTTCTTCCCCTTCTAACGCTCCCTTTCTCTATTTCTCCTTCTTCCCCCCAAACCCAC
ATGTCTGCTTCTGGAACAGCTTCGTTTCACGACCCGACCCGACCCGGCTTGACTTCCTCCTCCTCCTCCGCCGCCGCCCACCACCTCCCGCCGGATCCTCTCCTCTCCTC
CGGCGCCTTCATCCACTCCTCCTCCTCCTCCGCCCGCAATCATCGCCGATCTCCATTCCTCGCCGAGCCTCTCAACGGTAAGAAACTCCCTCCAGATCCGCCTGGAAATG
GAGATTCTCCGGCGGCTAAGAAGGCTCCGGCCTCCAGAAATTCCAACGCCTCTCCGAAATCTGCACCGTTGGAAAGGCCTGATTGGCTGCCGCCGGGCTGGGTGCTGGAA
GATAGAGTTCGGACCTCCGGTGCTACCGCCGGAACAGTGGATAAGTACTACTTTGACCCAACCTCGGGCCATCGATTCCGGTCTAAGATTGAGGTTCTTTACTTTCTAGA
AACAGGAACAAGGAAACGGAAGAAAGATGGTAATGCAGCGCCTGCTGATGGCTCTGAAGAACACAAGAGCAAGAAGTCTTCAAGCAAAGCTAAACCTGCTCCTTTAAACT
TTAATTACTTCAATGTGCCTGAAAAGGTTGAGTGGGTTCTCACAGACCCTTCTCAGGAGACTTGGACGCCATTTATCAACAATGAGAAAGTGCCCGAGTCTACAAAGAGC
GAATGGGTGGGAGCTTTTTATCTCCTCGGCCGATCGAAAGCAATTTGAAGGCAGCTTCAACCCTTTTGGACATTTTTTTTGGGAAACTCATCCAGGCAAGAACCATCCTC
CCTCCCTCTAATGGCTCCCATATGCAATTCTTTTTGTCTTCTTTTGTTGAAAAGGAGCAGGTGAGGTTGAGGGCAATGTTTTGAAAAGTGAAACCTAATTTGGTTAGGAA
AGATTACTACAAAAAATCATGACTTTTTAACTGACTATGTCTTGAACTGTAGAAGAAATGATCAATTTATGTAGATGAGGTCTGCAAAGTTCACATTCAGAAGCAAATGT
ATTTGAATGAGGGGGCTATTTAGTTTTGATTCAATGGTG
Protein sequenceShow/hide protein sequence
MSASGTASFHDPTRPGLTSSSSSAAAHHLPPDPLLSSGAFIHSSSSSARNHRRSPFLAEPLNGKKLPPDPPGNGDSPAAKKAPASRNSNASPKSAPLERPDWLPPGWVLE
DRVRTSGATAGTVDKYYFDPTSGHRFRSKIEVLYFLETGTRKRKKDGNAAPADGSEEHKSKKSSSKAKPAPLNFNYFNVPEKVEWVLTDPSQETWTPFINNEKVPESTKS
EWVGAFYLLGRSKAI