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Sed0024876 (gene) of Chayote v1 genome

Gene IDSed0024876
OrganismSechium edule (Chayote v1)
DescriptionProtein of unknown function, DUF584
Genome locationLG01:10810656..10811572
RNA-Seq ExpressionSed0024876
SyntenySed0024876
Gene Ontology termsNA
InterPro domainsIPR007608 - Senescence regulator S40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004153812.1 uncharacterized protein LOC101208118 [Cucumis sativus]8.4e-5571.35Show/hide
Query:  KTHVFTEDLEEHDVWNSVDCNEHFSNFIANNSTDYY---------SSSSSSSTLRLPSAPKLIPKSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSS
        K + F++DLEE DVWNSV+  E  SNFI+  S+DYY         S SSSSST RLP+APK+IPKS ST+ HETQMA   SSAPVDIPDWSKIYGKMGSS
Subjt:  KTHVFTEDLEEHDVWNSVDCNEHFSNFIANNSTDYY---------SSSSSSSTLRLPSAPKLIPKSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSS

Query:  ASEFSGEKGGDREDDGGEEEDMVPPHEWIAQKLARSQISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
        +   +G+K   R+ + GE+EDMVPPHEWIAQKLARS+ISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
Subjt:  ASEFSGEKGGDREDDGGEEEDMVPPHEWIAQKLARSQISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE

XP_008441031.1 PREDICTED: uncharacterized protein LOC103485264 [Cucumis melo]1.3e-5573.81Show/hide
Query:  KTHVFTEDLEEHDVWNSVDCNEHFSNFIANNSTDYY------SSSSSSSTLRLPSAPKLIPKSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSSASE
        K + F++DLEE DVWNSV+  E  SNFI   S DYY      SSSSSSST RLP+APK+IPKS ST+THETQMA   SSAPVDIPDWSKIYGKMGSS+  
Subjt:  KTHVFTEDLEEHDVWNSVDCNEHFSNFIANNSTDYY------SSSSSSSTLRLPSAPKLIPKSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSSASE

Query:  FSGEKGGDREDDGGEEEDMVPPHEWIAQKLARSQISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
         +GEK   R+ + GE++DMVPPHEWIAQKLARS+ISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
Subjt:  FSGEKGGDREDDGGEEEDMVPPHEWIAQKLARSQISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE

XP_022139905.1 uncharacterized protein LOC111010704 [Momordica charantia]1.7e-5573.33Show/hide
Query:  KTHVFTEDLEEHDVWNSVDCNEHFSNFIANNSTDYY---SSSSSSSTLRLPSAPKLIPKSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSSASEFSG
        K++ F+E+LEE +VWNSV+  E  S+F +  STDYY   S+SSSS+T R+P+APK+IPKS ST+THETQMA   SSAPVDIPDWSKIYGKMGSSA + S 
Subjt:  KTHVFTEDLEEHDVWNSVDCNEHFSNFIANNSTDYY---SSSSSSSTLRLPSAPKLIPKSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSSASEFSG

Query:  EKGGDREDDGGEEEDMVPPHEWIAQKLARSQISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
         K  D +  GGEE+DMVPPHEWIAQKLARSQISSFSVCEG+GRTLKGRDLSKVRNAILTKTGFLE
Subjt:  EKGGDREDDGGEEEDMVPPHEWIAQKLARSQISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE

XP_023518990.1 uncharacterized protein LOC111782469 [Cucurbita pepo subsp. pepo]2.7e-5371.34Show/hide
Query:  KTHVFTEDLEEHDVWNSVDCNEHFSNFIANNSTDYYSSSSSSSTLRLPSAPKLIPKSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSSASEFSGEKG
        K++ F+EDLEE DVW SV+  E  S+F+   STDY          RLP+APK+IPKS +T+THETQM T  SSAPVDIPDW+KIYGKMGSS  E SG+K 
Subjt:  KTHVFTEDLEEHDVWNSVDCNEHFSNFIANNSTDYYSSSSSSSTLRLPSAPKLIPKSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSSASEFSGEKG

Query:  GDR--EDDGGEEEDMVPPHEWIAQKLARSQISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
         DR  ED  GEE+DMVPPHEWIAQKLARS+ISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
Subjt:  GDR--EDDGGEEEDMVPPHEWIAQKLARSQISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE

XP_038894875.1 uncharacterized protein LOC120083273 [Benincasa hispida]7.6e-5674.27Show/hide
Query:  KTHVFTEDLEEHDVWNSVDCNEHFSNFIANNSTDYY---------SSSSSSSTLRLPSAPKLIPKSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSS
        K + F+EDLEE DVWNSV   E  SNFI  +S D Y         SSSSSSST RLPSAPK+IPKS ST+THETQMA   SSAPVDIPDWSKIYGKMGSS
Subjt:  KTHVFTEDLEEHDVWNSVDCNEHFSNFIANNSTDYY---------SSSSSSSTLRLPSAPKLIPKSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSS

Query:  ASEFSGEKGGDREDDGGEEEDMVPPHEWIAQKLARSQISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
        + + S   G D+ED  GEE+DMVPPHEWIAQKLARS+ISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
Subjt:  ASEFSGEKGGDREDDGGEEEDMVPPHEWIAQKLARSQISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE

TrEMBL top hitse value%identityAlignment
A0A0A0LX30 Uncharacterized protein4.1e-5571.35Show/hide
Query:  KTHVFTEDLEEHDVWNSVDCNEHFSNFIANNSTDYY---------SSSSSSSTLRLPSAPKLIPKSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSS
        K + F++DLEE DVWNSV+  E  SNFI+  S+DYY         S SSSSST RLP+APK+IPKS ST+ HETQMA   SSAPVDIPDWSKIYGKMGSS
Subjt:  KTHVFTEDLEEHDVWNSVDCNEHFSNFIANNSTDYY---------SSSSSSSTLRLPSAPKLIPKSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSS

Query:  ASEFSGEKGGDREDDGGEEEDMVPPHEWIAQKLARSQISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
        +   +G+K   R+ + GE+EDMVPPHEWIAQKLARS+ISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
Subjt:  ASEFSGEKGGDREDDGGEEEDMVPPHEWIAQKLARSQISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE

A0A1S3B355 uncharacterized protein LOC1034852646.3e-5673.81Show/hide
Query:  KTHVFTEDLEEHDVWNSVDCNEHFSNFIANNSTDYY------SSSSSSSTLRLPSAPKLIPKSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSSASE
        K + F++DLEE DVWNSV+  E  SNFI   S DYY      SSSSSSST RLP+APK+IPKS ST+THETQMA   SSAPVDIPDWSKIYGKMGSS+  
Subjt:  KTHVFTEDLEEHDVWNSVDCNEHFSNFIANNSTDYY------SSSSSSSTLRLPSAPKLIPKSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSSASE

Query:  FSGEKGGDREDDGGEEEDMVPPHEWIAQKLARSQISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
         +GEK   R+ + GE++DMVPPHEWIAQKLARS+ISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
Subjt:  FSGEKGGDREDDGGEEEDMVPPHEWIAQKLARSQISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE

A0A5D3BLZ0 Zinc-regulated protein 86.3e-5673.81Show/hide
Query:  KTHVFTEDLEEHDVWNSVDCNEHFSNFIANNSTDYY------SSSSSSSTLRLPSAPKLIPKSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSSASE
        K + F++DLEE DVWNSV+  E  SNFI   S DYY      SSSSSSST RLP+APK+IPKS ST+THETQMA   SSAPVDIPDWSKIYGKMGSS+  
Subjt:  KTHVFTEDLEEHDVWNSVDCNEHFSNFIANNSTDYY------SSSSSSSTLRLPSAPKLIPKSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSSASE

Query:  FSGEKGGDREDDGGEEEDMVPPHEWIAQKLARSQISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
         +GEK   R+ + GE++DMVPPHEWIAQKLARS+ISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
Subjt:  FSGEKGGDREDDGGEEEDMVPPHEWIAQKLARSQISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE

A0A6J1CDL0 uncharacterized protein LOC1110107048.2e-5673.33Show/hide
Query:  KTHVFTEDLEEHDVWNSVDCNEHFSNFIANNSTDYY---SSSSSSSTLRLPSAPKLIPKSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSSASEFSG
        K++ F+E+LEE +VWNSV+  E  S+F +  STDYY   S+SSSS+T R+P+APK+IPKS ST+THETQMA   SSAPVDIPDWSKIYGKMGSSA + S 
Subjt:  KTHVFTEDLEEHDVWNSVDCNEHFSNFIANNSTDYY---SSSSSSSTLRLPSAPKLIPKSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSSASEFSG

Query:  EKGGDREDDGGEEEDMVPPHEWIAQKLARSQISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
         K  D +  GGEE+DMVPPHEWIAQKLARSQISSFSVCEG+GRTLKGRDLSKVRNAILTKTGFLE
Subjt:  EKGGDREDDGGEEEDMVPPHEWIAQKLARSQISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE

E5GC55 Uncharacterized protein6.3e-5673.81Show/hide
Query:  KTHVFTEDLEEHDVWNSVDCNEHFSNFIANNSTDYY------SSSSSSSTLRLPSAPKLIPKSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSSASE
        K + F++DLEE DVWNSV+  E  SNFI   S DYY      SSSSSSST RLP+APK+IPKS ST+THETQMA   SSAPVDIPDWSKIYGKMGSS+  
Subjt:  KTHVFTEDLEEHDVWNSVDCNEHFSNFIANNSTDYY------SSSSSSSTLRLPSAPKLIPKSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSSASE

Query:  FSGEKGGDREDDGGEEEDMVPPHEWIAQKLARSQISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
         +GEK   R+ + GE++DMVPPHEWIAQKLARS+ISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
Subjt:  FSGEKGGDREDDGGEEEDMVPPHEWIAQKLARSQISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15040.1 Protein of unknown function, DUF5841.0e-1342.97Show/hide
Query:  SSSSSSSTLRLPSAPKLIPKSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSSASEFSGEKGGDREDDGGEEE--DMVPPHEWIAQKLARSQISSFSV
        S+ SSSS   +P+APK   +                SAPV +P  S     M     EF   K  D  DD  EEE  +M+PPHE +A+ LA+S + S SV
Subjt:  SSSSSSSTLRLPSAPKLIPKSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSSASEFSGEKGGDREDDGGEEE--DMVPPHEWIAQKLARSQISSFSV

Query:  CEGVGRTLKGRDLSKVRNAILTKTGFLE
         EG GRTLKGRDL +VRNA+  +TGF++
Subjt:  CEGVGRTLKGRDLSKVRNAILTKTGFLE

AT3G45210.1 Protein of unknown function, DUF5841.1e-1743.18Show/hide
Query:  NSTDYYSSSSSSSTLRLPSAPKLIPKSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSSASEFSGEKGGDREDDGGEEEDMVPPHEWIAQKLARSQIS
        + +D YS+ S S   R     KLI  +  +        T  SS P+++ +WSKI GK           K  + +DDGGE +  +PPHE+    LA+++++
Subjt:  NSTDYYSSSSSSSTLRLPSAPKLIPKSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSSASEFSGEKGGDREDDGGEEEDMVPPHEWIAQKLARSQIS

Query:  SFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
        SFSV EG+GRTLKGRD+S+VRNAIL KTGFL+
Subjt:  SFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE

AT4G04630.1 Protein of unknown function, DUF5841.1e-2850Show/hide
Query:  EDLEEHDVWNSVDCNEHFSNFIANNSTDYYSSSSSSSTLRLPSAPKLIPKSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSSASEFSGEKGGDREDD
        E+ +E DVW+ +   E  S  +    + + SSSSSS      S+P  I +S            K SSAP+++PDWSK+YG   S ++  S        DD
Subjt:  EDLEEHDVWNSVDCNEHFSNFIANNSTDYYSSSSSSSTLRLPSAPKLIPKSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSSASEFSGEKGGDREDD

Query:  GGEEED--MVPPHEWIAQKLARSQISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
          E++D  MVPPHEW+A+KLAR+QISSFS+CEGVGRTLKGRDLSKVRNA+L+KTGFLE
Subjt:  GGEEED--MVPPHEWIAQKLARSQISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE

AT4G21970.1 Protein of unknown function, DUF5842.1e-2745.22Show/hide
Query:  EDLEEHDVWNSV-DCNEHFSNFIANNSTDYYSSSSSSSTLRLPSAPKLIPKSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSSASEFSGEKGGDRED
        E+ +E +VW+ + +          + S + +S+SSSSS   +P            K +E     K SSAP++IPDWSK+YG    + S        D +D
Subjt:  EDLEEHDVWNSV-DCNEHFSNFIANNSTDYYSSSSSSSTLRLPSAPKLIPKSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSSASEFSGEKGGDRED

Query:  DGGEEEDMVPPHEWIAQKLARSQISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
        +G     MVPPHE +A++LAR+QISSFS+CEG+GRTLKGRDLSK RNA+LT+TGFLE
Subjt:  DGGEEEDMVPPHEWIAQKLARSQISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE

AT5G60680.1 Protein of unknown function, DUF5849.7e-1747.62Show/hide
Query:  KSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSSASEFSGEKGGDREDDGGEEEDMVPPHEWIAQKLARSQISSFSVCEGVGRTLKGRDLSKVRNAIL
        K +S +      A   SS PV++PDWSKI           S E   D +DD  +  D +PPHE+    LA+++++SFSV EGVGRTLKGRDLS+VRNAI 
Subjt:  KSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSSASEFSGEKGGDREDDGGEEEDMVPPHEWIAQKLARSQISSFSVCEGVGRTLKGRDLSKVRNAIL

Query:  TKTGF
         K GF
Subjt:  TKTGF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAACAAAACCCATGTCTTCACTGAAGATTTGGAGGAACATGATGTATGGAATTCTGTTGACTGTAATGAACATTTTTCAAATTTCATTGCTAACAACTCCACTGA
TTATTACTCTTCTTCTTCTTCTTCTTCAACTTTGCGGCTTCCATCTGCTCCAAAATTGATTCCAAAATCCACTTCGACGAAAACCCATGAAACCCAGATGGCGACTAAAG
GATCCTCTGCTCCGGTGGACATTCCCGATTGGTCCAAAATTTACGGTAAGATGGGCTCGTCGGCCAGCGAATTTTCCGGCGAAAAAGGTGGAGATAGAGAAGATGACGGT
GGTGAAGAAGAGGATATGGTGCCTCCTCATGAATGGATTGCTCAGAAATTGGCGAGAAGCCAGATTTCGTCTTTCTCTGTTTGTGAAGGGGTTGGAAGAACTCTCAAAGG
GAGAGATTTGAGCAAAGTTCGAAACGCCATTTTGACCAAGACTGGTTTTTTAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ACCAAATTCCCCTTTCCATTTTCCTTTTTACCCTCTTCTTCCTTCCTTTACTTATTTCCACCTTTCTCTGTCATTTTTCTTGGGATTATTATTGAAAAAAAACAAACCCC
ATTTCACCAACTCTTCAAAAACCTCTGTTTTTCCTTTCTTCTCTGCAACTAAACCCAATGGCGAACAAAACCCATGTCTTCACTGAAGATTTGGAGGAACATGATGTATG
GAATTCTGTTGACTGTAATGAACATTTTTCAAATTTCATTGCTAACAACTCCACTGATTATTACTCTTCTTCTTCTTCTTCTTCAACTTTGCGGCTTCCATCTGCTCCAA
AATTGATTCCAAAATCCACTTCGACGAAAACCCATGAAACCCAGATGGCGACTAAAGGATCCTCTGCTCCGGTGGACATTCCCGATTGGTCCAAAATTTACGGTAAGATG
GGCTCGTCGGCCAGCGAATTTTCCGGCGAAAAAGGTGGAGATAGAGAAGATGACGGTGGTGAAGAAGAGGATATGGTGCCTCCTCATGAATGGATTGCTCAGAAATTGGC
GAGAAGCCAGATTTCGTCTTTCTCTGTTTGTGAAGGGGTTGGAAGAACTCTCAAAGGGAGAGATTTGAGCAAAGTTCGAAACGCCATTTTGACCAAGACTGGTTTTTTAG
AGTGATGTTCTTAAAAAAAAAAGCTCTGCTTTAGGAAGCTAAGATGGCAGAGACGATTATGGTTGTTTTGTTCTGCAGTTTTTTGTTTGGTTTCCGCCATTGTTGTGGTA
TGTTCGAGCTTAGAACAAGAGTTTCCAGCTAGAATTCAAAGGAGAAATGAAAAAAAAAAAGGAAAATTATTTTGAGTAGATGGAATTATGGAGTGGAGCTGGCTGTTTTA
TGATCTACAACTTGCTAGTGGAATTAGAAGTGATTTT
Protein sequenceShow/hide protein sequence
MANKTHVFTEDLEEHDVWNSVDCNEHFSNFIANNSTDYYSSSSSSSTLRLPSAPKLIPKSTSTKTHETQMATKGSSAPVDIPDWSKIYGKMGSSASEFSGEKGGDREDDG
GEEEDMVPPHEWIAQKLARSQISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE