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Sed0024888 (gene) of Chayote v1 genome

Gene IDSed0024888
OrganismSechium edule (Chayote v1)
DescriptionProtein of unknown function (DUF 3339)
Genome locationLG09:3561587..3561799
RNA-Seq ExpressionSed0024888
SyntenySed0024888
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR021775 - Protein of unknown function DUF3339


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459846.1 PREDICTED: uncharacterized protein LOC103498846 [Cucumis melo]4.4e-2992.86Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHMYIGS
        MADWGP+FVAVILFVLLTPGLLFQLPGNRRC+EFGNFHTSAA+IIVHSILYFGLICVFLLA+KVH+YIGS
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHMYIGS

XP_011656810.1 uncharacterized protein LOC101208994 [Cucumis sativus]2.0e-2994.29Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHMYIGS
        MADWGP+FVAVILFVLLTPGLLFQLPGNRRC+EFGNFHTSAAAIIVHSILYFGLICVFLLA+KVH+YIGS
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHMYIGS

XP_022960371.1 uncharacterized protein LOC111461116 [Cucurbita moschata]1.3e-2892.75Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHMYIG
        MADWGPVFVAVILFVLLTPGLLFQLPGNRRC+EFGNFHTSAAAI+VHS+LYFGLICVFLLA+KVH+YIG
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHMYIG

XP_022991385.1 uncharacterized protein LOC111488037 isoform X2 [Cucurbita maxima]2.0e-2994.29Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHMYIGS
        MADWGPVFVAVILFVLLTPGLLFQLPGNRRC+EFGNFHTSAAAIIVHS+LYFGLICVFLLA+KVH+YIGS
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHMYIGS

XP_038875875.1 uncharacterized protein LOC120068234 [Benincasa hispida]3.4e-2994.29Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHMYIGS
        MADWGPVFVAVILFVLLTPGLLFQLPGNRRC+EFGNFHTSAA+IIVHSILYFGLICVFLLA+KVH+YIGS
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHMYIGS

TrEMBL top hitse value%identityAlignment
A0A0A0KAG8 Uncharacterized protein9.6e-3094.29Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHMYIGS
        MADWGP+FVAVILFVLLTPGLLFQLPGNRRC+EFGNFHTSAAAIIVHSILYFGLICVFLLA+KVH+YIGS
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHMYIGS

A0A1S3CBL1 uncharacterized protein LOC1034988462.1e-2992.86Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHMYIGS
        MADWGP+FVAVILFVLLTPGLLFQLPGNRRC+EFGNFHTSAA+IIVHSILYFGLICVFLLA+KVH+YIGS
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHMYIGS

A0A6J1H7E6 uncharacterized protein LOC1114611166.2e-2992.75Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHMYIG
        MADWGPVFVAVILFVLLTPGLLFQLPGNRRC+EFGNFHTSAAAI+VHS+LYFGLICVFLLA+KVH+YIG
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHMYIG

A0A6J1JSS9 uncharacterized protein LOC111488037 isoform X29.6e-3094.29Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHMYIGS
        MADWGPVFVAVILFVLLTPGLLFQLPGNRRC+EFGNFHTSAAAIIVHS+LYFGLICVFLLA+KVH+YIGS
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHMYIGS

A0A6J1KVP8 uncharacterized protein LOC1114976236.2e-2992.75Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHMYIG
        MADWGPVFVAVILFVLLTPGLLFQLPGNRRC+EFGNFHTSAAAI+VHS+LYFGLICVFLLA+KVH+YIG
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHMYIG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01940.1 Protein of unknown function (DUF 3339)2.4e-1756.72Show/hide
Query:  ADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHMYI
        ADWGPV VAV+LFV+L+PGLLFQLP  RR +E GN  TS  +I+VH+IL+F +I + ++A+++H++I
Subjt:  ADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHMYI

AT3G27030.1 unknown protein6.8e-2063.64Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHM
        M DWGPVFVAV LFVLLTPGLL Q+PG  R VEFG F TS  ++IVH+++YF L+C+ LLA+++H+
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHM

AT3G48660.1 Protein of unknown function (DUF 3339)5.6e-2265.71Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHMYIGS
        MADWGPV VAVILFVLLTPGLLFQ+P   R VEFGN  TS A+I+VH+I++FGLI +F +A+++H+Y G+
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHMYIGS

AT5G08391.1 Protein of unknown function (DUF 3339)1.8e-2573.91Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHMYIG
        M+DWGPV V VILFV+LTPGLLFQLPG ++ VEFGNF TSA ++IVHS+LYF L+CVFLLA+K+H+YIG
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHMYIG

AT5G63500.1 Protein of unknown function (DUF 3339)6.2e-2163.77Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHMYIG
        MADWGPV +AVILFV+L+PGLLFQ+P   R VEFGN  TS A+I+VH+I++FGLI +F +A+ VH+Y G
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHMYIG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGATTGGGGGCCTGTTTTTGTGGCTGTGATTTTGTTTGTTTTGCTAACACCAGGGCTGCTCTTTCAGCTTCCTGGCAATCGCAGGTGCGTGGAGTTCGGCAACTT
CCACACCAGCGCTGCTGCGATTATCGTCCACTCGATTCTCTACTTCGGTCTCATTTGCGTCTTCTTGCTCGCTGTCAAAGTTCATATGTATATCGGTTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGATTGGGGGCCTGTTTTTGTGGCTGTGATTTTGTTTGTTTTGCTAACACCAGGGCTGCTCTTTCAGCTTCCTGGCAATCGCAGGTGCGTGGAGTTCGGCAACTT
CCACACCAGCGCTGCTGCGATTATCGTCCACTCGATTCTCTACTTCGGTCTCATTTGCGTCTTCTTGCTCGCTGTCAAAGTTCATATGTATATCGGTTCCTAA
Protein sequenceShow/hide protein sequence
MADWGPVFVAVILFVLLTPGLLFQLPGNRRCVEFGNFHTSAAAIIVHSILYFGLICVFLLAVKVHMYIGS