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Sed0024893 (gene) of Chayote v1 genome

Gene IDSed0024893
OrganismSechium edule (Chayote v1)
DescriptionDisease resistance protein (TIR-NBS class)
Genome locationLG10:33851664..33851897
RNA-Seq ExpressionSed0024893
SyntenySed0024893
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0007165 - signal transduction (biological process)
GO:0003953 - NAD+ nucleosidase activity (molecular function)
GO:0043531 - ADP binding (molecular function)
InterPro domainsIPR000157 - Toll/interleukin-1 receptor homology (TIR) domain
IPR035897 - Toll/interleukin-1 receptor homology (TIR) domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141775.1 TMV resistance protein N-like [Momordica charantia]1.2e-2785.33Show/hide
Query:  MSYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL
        M+YDVFISFRGEDT N FVGFLY+ALRQLGIMTFMDDKKL IGD+LS + +KAI+ESRSSIVVLSKDYASSKWCL
Subjt:  MSYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL

XP_022141776.1 LOW QUALITY PROTEIN: TMV resistance protein N-like [Momordica charantia]1.6e-2786.67Show/hide
Query:  MSYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL
        M+YDVFISFRGEDT N FVGFLYEAL QLGIMTFMDDKKL IGD+LS +L+KAI+ESRSSIVVLSKDYASSKWCL
Subjt:  MSYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL

XP_022141856.1 toll/interleukin-1 receptor-like protein isoform X1 [Momordica charantia]9.1e-2886.67Show/hide
Query:  MSYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL
        M+YDVFISFRGEDT N FVGFLYE LRQLGIMTFMDDKKL IGD+LS +L+KAI+ESRSSIVVLSKDYASSKWCL
Subjt:  MSYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL

XP_022141857.1 toll/interleukin-1 receptor-like protein isoform X2 [Momordica charantia]9.1e-2886.67Show/hide
Query:  MSYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL
        M+YDVFISFRGEDT N FVGFLYE LRQLGIMTFMDDKKL IGD+LS +L+KAI+ESRSSIVVLSKDYASSKWCL
Subjt:  MSYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL

XP_022141862.1 TMV resistance protein N-like [Momordica charantia]1.6e-2785.33Show/hide
Query:  MSYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL
        M+YDVFISFRGEDT N FVGFLYEAL QLGIMTFMDD+KL IGD+LS  L+KAI+ESRSSIVVLSKDYASSKWCL
Subjt:  MSYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL

TrEMBL top hitse value%identityAlignment
A0A6J1CJ31 TMV resistance protein N-like5.8e-2885.33Show/hide
Query:  MSYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL
        M+YDVFISFRGEDT N FVGFLY+ALRQLGIMTFMDDKKL IGD+LS + +KAI+ESRSSIVVLSKDYASSKWCL
Subjt:  MSYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL

A0A6J1CJZ3 toll/interleukin-1 receptor-like protein isoform X24.4e-2886.67Show/hide
Query:  MSYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL
        M+YDVFISFRGEDT N FVGFLYE LRQLGIMTFMDDKKL IGD+LS +L+KAI+ESRSSIVVLSKDYASSKWCL
Subjt:  MSYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL

A0A6J1CK95 LOW QUALITY PROTEIN: TMV resistance protein N-like7.6e-2886.67Show/hide
Query:  MSYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL
        M+YDVFISFRGEDT N FVGFLYEAL QLGIMTFMDDKKL IGD+LS +L+KAI+ESRSSIVVLSKDYASSKWCL
Subjt:  MSYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL

A0A6J1CKG9 toll/interleukin-1 receptor-like protein isoform X14.4e-2886.67Show/hide
Query:  MSYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL
        M+YDVFISFRGEDT N FVGFLYE LRQLGIMTFMDDKKL IGD+LS +L+KAI+ESRSSIVVLSKDYASSKWCL
Subjt:  MSYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL

A0A6J1CL15 TMV resistance protein N-like7.6e-2885.33Show/hide
Query:  MSYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL
        M+YDVFISFRGEDT N FVGFLYEAL QLGIMTFMDD+KL IGD+LS  L+KAI+ESRSSIVVLSKDYASSKWCL
Subjt:  MSYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL

SwissProt top hitse value%identityAlignment
A0A290U7C4 Disease resistance protein Roq11.5e-2066.22Show/hide
Query:  SYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL
        SYDVF+SFRGEDT  TFVG L+ AL + GI TFMDDK+L  G ++S EL+KAI ESR ++VV SK+YASS WCL
Subjt:  SYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL

Q40392 TMV resistance protein N3.1e-1859.46Show/hide
Query:  SYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL
        SYDVF+SFRGEDT  TF   LYE L   GI TF DDK+L  G  +  EL KAI+ES+ +IVV S++YA+S+WCL
Subjt:  SYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL

Q9SSN3 Toll/interleukin-1 receptor-like protein1.2e-1452.05Show/hide
Query:  YDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL
        YDVF+SFRG DT + F+ FLY+ L +  I TF DDK+L  G   S EL   I+ SR ++VV+S++YA+S WCL
Subjt:  YDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL

V9M2S5 Disease resistance protein RPV11.3e-1658.11Show/hide
Query:  SYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL
        +YDVF+SFRGEDT   F   LY AL + GI TF DD +L  G+ ++ ELLKAI+ESRSS++V S++YA S+WCL
Subjt:  SYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL

V9M398 Disease resistance protein RUN15.8e-1758.67Show/hide
Query:  MSYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL
        ++YDVF+SFRGEDT   F   LY AL + GI TF DD KL  G+ ++ ELLKAI+ESRSS++V S++YA S+WCL
Subjt:  MSYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL

Arabidopsis top hitse value%identityAlignment
AT1G17600.1 Disease resistance protein (TIR-NBS-LRR class) family1.1e-1856.76Show/hide
Query:  YDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCLI
        YDVF+SFRGEDT  T V  LY AL   GI+TF DD++L IGD++S EL +A+  S  ++VVLS++YA+S+WCL+
Subjt:  YDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCLI

AT1G72840.1 Disease resistance protein (TIR-NBS-LRR class)1.8e-1857.53Show/hide
Query:  YDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL
        YDVF+SFRG DT  T V  LY ALR  G++TF DD+KL IGD ++  L+KAIQ S  ++V+LS++YA+S WCL
Subjt:  YDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL

AT5G36930.1 Disease resistance protein (TIR-NBS-LRR class) family1.4e-1858.11Show/hide
Query:  SYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL
        +YDVF+SFRG D    F+  LY++LR+ GI TFMDD +L  G+ +S ELL AI+ S+  IVVL+KDYASS WCL
Subjt:  SYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL

AT5G36930.2 Disease resistance protein (TIR-NBS-LRR class) family1.4e-1858.11Show/hide
Query:  SYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL
        +YDVF+SFRG D    F+  LY++LR+ GI TFMDD +L  G+ +S ELL AI+ S+  IVVL+KDYASS WCL
Subjt:  SYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCL

AT5G40100.1 Disease resistance protein (TIR-NBS-LRR class) family3.7e-1957.33Show/hide
Query:  SYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCLI
        SYDVF+SFRGEDT ++ V  LYEAL   GI TF DDK+L +GD++S EL +AI+ S   +VVLS++Y +S+WCL+
Subjt:  SYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTACGATGTTTTCATAAGTTTCAGAGGCGAAGATACTCACAACACTTTCGTCGGATTCCTGTACGAAGCTCTGCGTCAATTGGGGATTATGACTTTCATGGACGA
CAAGAAGCTCTGCATTGGGGACAATCTCAGCCATGAACTCCTCAAAGCAATTCAAGAATCCAGATCTTCAATCGTCGTTCTCTCCAAAGATTATGCTTCTTCCAAATGGT
GTTTGATATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTACGATGTTTTCATAAGTTTCAGAGGCGAAGATACTCACAACACTTTCGTCGGATTCCTGTACGAAGCTCTGCGTCAATTGGGGATTATGACTTTCATGGACGA
CAAGAAGCTCTGCATTGGGGACAATCTCAGCCATGAACTCCTCAAAGCAATTCAAGAATCCAGATCTTCAATCGTCGTTCTCTCCAAAGATTATGCTTCTTCCAAATGGT
GTTTGATATCATGA
Protein sequenceShow/hide protein sequence
MSYDVFISFRGEDTHNTFVGFLYEALRQLGIMTFMDDKKLCIGDNLSHELLKAIQESRSSIVVLSKDYASSKWCLIS