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Sed0024920 (gene) of Chayote v1 genome

Gene IDSed0024920
OrganismSechium edule (Chayote v1)
DescriptionDBD_Tnp_Mut domain-containing protein
Genome locationLG11:11188015..11189703
RNA-Seq ExpressionSed0024920
SyntenySed0024920
Gene Ontology termsNA
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031318.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]5.4e-4948.92Show/hide
Query:  MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFGLLILRELKLDVHRSSSKLYVLLDYGQST--PPFEILEDKDVDWFLTLVKNNGTRHPLV--
        M K+PIVVFH GQW+   SY  YK +GVLVDE+MSFE F  LILRE+  D   SS +L +LLDYG +      +I EDKDV WFL+LVK   TRHPLV  
Subjt:  MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFGLLILRELKLDVHRSSSKLYVLLDYGQST--PPFEILEDKDVDWFLTLVKNNGTRHPLV--

Query:  --VDVKDFYLEGTS--SSVVSNSTLLVSSSTVDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSNQAVEFQC
            V D  LE +S   S + N   L+ SS++DD+      F ++ DI    L   F++  KD FASKE+L   F Y+A+KNNFEF+T RS+++++EF+C
Subjt:  --VDVKDFYLEGTS--SSVVSNSTLLVSSSTVDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSNQAVEFQC

Query:  CKADCLWNVKASRFKDSDLWIFRKYVSIHNC
         + +C W V+ASR+K  +LW  RKY++ HNC
Subjt:  CKADCLWNVKASRFKDSDLWIFRKYVSIHNC

TYJ98376.1 uncharacterized protein E5676_scaffold232G001130 [Cucumis melo var. makuwa]5.4e-4948.92Show/hide
Query:  MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFGLLILRELKLDVHRSSSKLYVLLDYGQST--PPFEILEDKDVDWFLTLVKNNGTRHPLV--
        M K+PIVVFH GQW+   SY  YK +GVLVDE+MSFE F  LILRE+  D   SS +L +LLDYG +      +I EDKDV WFL+LVK   TRHPLV  
Subjt:  MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFGLLILRELKLDVHRSSSKLYVLLDYGQST--PPFEILEDKDVDWFLTLVKNNGTRHPLV--

Query:  --VDVKDFYLEGTS--SSVVSNSTLLVSSSTVDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSNQAVEFQC
            V D  LE +S   S + N   L+ SS++DD+      F ++ DI    L   F++  KD FASKE+L   F Y+A+KNNFEF+T RS+++++EF+C
Subjt:  --VDVKDFYLEGTS--SSVVSNSTLLVSSSTVDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSNQAVEFQC

Query:  CKADCLWNVKASRFKDSDLWIFRKYVSIHNC
         + +C W V+ASR+K  +LW  RKY++ HNC
Subjt:  CKADCLWNVKASRFKDSDLWIFRKYVSIHNC

TYK09469.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]5.4e-4948.92Show/hide
Query:  MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFGLLILRELKLDVHRSSSKLYVLLDYGQST--PPFEILEDKDVDWFLTLVKNNGTRHPLV--
        M K+PIVVFH GQW+   SY  YK +GVLVDE+MSFE F  LILRE+  D   SS +L +LLDYG +      +I EDKDV WFL+LVK   TRHPLV  
Subjt:  MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFGLLILRELKLDVHRSSSKLYVLLDYGQST--PPFEILEDKDVDWFLTLVKNNGTRHPLV--

Query:  --VDVKDFYLEGTS--SSVVSNSTLLVSSSTVDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSNQAVEFQC
            V D  LE +S   S + N   L+ SS++DD+      F ++ DI    L   F++  KD FASKE+L   F Y+A+KNNFEF+T RS+++++EF+C
Subjt:  --VDVKDFYLEGTS--SSVVSNSTLLVSSSTVDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSNQAVEFQC

Query:  CKADCLWNVKASRFKDSDLWIFRKYVSIHNC
         + +C W V+ASR+K  +LW  RKY++ HNC
Subjt:  CKADCLWNVKASRFKDSDLWIFRKYVSIHNC

TYK23827.1 MuDR family transposase [Cucumis melo var. makuwa]5.8e-5149.78Show/hide
Query:  MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFGLLILRELKLDVHRSSSKLYVLLDYG--QSTPPFEILEDKDVDWFLTLVKNNGTRHPLV--
        M K+PIVVFH GQW+   SY  YK +GVLVDE+MSFE FG LILRE++ D   SS +L +LLDYG        +I EDKDV WFL+LVK   TRHPLV  
Subjt:  MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFGLLILRELKLDVHRSSSKLYVLLDYG--QSTPPFEILEDKDVDWFLTLVKNNGTRHPLV--

Query:  --VDVKDFYLEGTS--SSVVSNSTLLVSSSTVDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSNQAVEFQC
          V V +  LE +S   S + N   L+SSS++DD+      F ++ DI    L   F++  KD FASKE+L   F Y+A+KNNFEF+T RS+++++EF+C
Subjt:  --VDVKDFYLEGTS--SSVVSNSTLLVSSSTVDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSNQAVEFQC

Query:  CKADCLWNVKASRFKDSDLWIFRKYVSIHNC
         + +C W V+ASR+K  +LW  RKY++ HNC
Subjt:  CKADCLWNVKASRFKDSDLWIFRKYVSIHNC

XP_038907134.1 uncharacterized protein LOC120092945 [Benincasa hispida]2.9e-5050.45Show/hide
Query:  IPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFGLLILRELKLDVHRSSSKLYVLLDYGQSTPP--FEILEDKDVDWFLTLVKNNGTRHPLVVDVKD
        IPIVVFHGG WN    Y  YK +GVLVD++M FE F  LI++E++LD   SS +L  LLD+G +      EI EDKDV WFLTLVK   TRHPLV  V  
Subjt:  IPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFGLLILRELKLDVHRSSSKLYVLLDYGQSTPP--FEILEDKDVDWFLTLVKNNGTRHPLVVDVKD

Query:  FYLEGTSSSVVSN-----STLLVSSSTVDDNDGDGVPFHVIKDIRLDCVFNVKDTFASKEVLCSCFKYLAVKNNFEFRTPRSSNQAVEFQCCKADCLWNV
          LEG+SS V S      S +  S   +DD+      F VI DI +      KD FASKE+L  CF Y+AVK NFEF+T RS+++++EF+C +  C W V
Subjt:  FYLEGTSSSVVSN-----STLLVSSSTVDDNDGDGVPFHVIKDIRLDCVFNVKDTFASKEVLCSCFKYLAVKNNFEFRTPRSSNQAVEFQCCKADCLWNV

Query:  KASRFKDSDLWIFRKYVSIHNC
        +ASR+K SDLW+ RK++ IH+C
Subjt:  KASRFKDSDLWIFRKYVSIHNC

TrEMBL top hitse value%identityAlignment
A0A5A7T3G5 Protein FAR1-RELATED SEQUENCE 4-like2.6e-4948.92Show/hide
Query:  MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFGLLILRELKLDVHRSSSKLYVLLDYGQST--PPFEILEDKDVDWFLTLVKNNGTRHPLV--
        M K+PIVVFH GQW+   SY  YK +GVLVDE+MSFE F  LILRE+  D   SS +L +LLDYG +      +I EDKDV WFL+LVK   TRHPLV  
Subjt:  MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFGLLILRELKLDVHRSSSKLYVLLDYGQST--PPFEILEDKDVDWFLTLVKNNGTRHPLV--

Query:  --VDVKDFYLEGTS--SSVVSNSTLLVSSSTVDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSNQAVEFQC
            V D  LE +S   S + N   L+ SS++DD+      F ++ DI    L   F++  KD FASKE+L   F Y+A+KNNFEF+T RS+++++EF+C
Subjt:  --VDVKDFYLEGTS--SSVVSNSTLLVSSSTVDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSNQAVEFQC

Query:  CKADCLWNVKASRFKDSDLWIFRKYVSIHNC
         + +C W V+ASR+K  +LW  RKY++ HNC
Subjt:  CKADCLWNVKASRFKDSDLWIFRKYVSIHNC

A0A5D3BH55 DBD_Tnp_Mut domain-containing protein2.6e-4948.92Show/hide
Query:  MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFGLLILRELKLDVHRSSSKLYVLLDYGQST--PPFEILEDKDVDWFLTLVKNNGTRHPLV--
        M K+PIVVFH GQW+   SY  YK +GVLVDE+MSFE F  LILRE+  D   SS +L +LLDYG +      +I EDKDV WFL+LVK   TRHPLV  
Subjt:  MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFGLLILRELKLDVHRSSSKLYVLLDYGQST--PPFEILEDKDVDWFLTLVKNNGTRHPLV--

Query:  --VDVKDFYLEGTS--SSVVSNSTLLVSSSTVDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSNQAVEFQC
            V D  LE +S   S + N   L+ SS++DD+      F ++ DI    L   F++  KD FASKE+L   F Y+A+KNNFEF+T RS+++++EF+C
Subjt:  --VDVKDFYLEGTS--SSVVSNSTLLVSSSTVDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSNQAVEFQC

Query:  CKADCLWNVKASRFKDSDLWIFRKYVSIHNC
         + +C W V+ASR+K  +LW  RKY++ HNC
Subjt:  CKADCLWNVKASRFKDSDLWIFRKYVSIHNC

A0A5D3C8T8 SWIM-type domain-containing protein2.6e-4948.92Show/hide
Query:  MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFGLLILRELKLDVHRSSSKLYVLLDYGQST--PPFEILEDKDVDWFLTLVKNNGTRHPLV--
        M K+PIVVFH GQW+   SY  YK +GVLVDE+MSFE F  LILRE+  D   SS +L +LLDYG +      +I EDKDV WFL+LVK   TRHPLV  
Subjt:  MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFGLLILRELKLDVHRSSSKLYVLLDYGQST--PPFEILEDKDVDWFLTLVKNNGTRHPLV--

Query:  --VDVKDFYLEGTS--SSVVSNSTLLVSSSTVDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSNQAVEFQC
            V D  LE +S   S + N   L+ SS++DD+      F ++ DI    L   F++  KD FASKE+L   F Y+A+KNNFEF+T RS+++++EF+C
Subjt:  --VDVKDFYLEGTS--SSVVSNSTLLVSSSTVDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSNQAVEFQC

Query:  CKADCLWNVKASRFKDSDLWIFRKYVSIHNC
         + +C W V+ASR+K  +LW  RKY++ HNC
Subjt:  CKADCLWNVKASRFKDSDLWIFRKYVSIHNC

A0A5D3DAW8 Protein FAR1-RELATED SEQUENCE 4-like2.6e-4948.92Show/hide
Query:  MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFGLLILRELKLDVHRSSSKLYVLLDYGQST--PPFEILEDKDVDWFLTLVKNNGTRHPLV--
        M K+PIVVFH GQW+   SY  YK +GVLVDE+MSFE F  LILRE+  D   SS +L +LLDYG +      +I EDKDV WFL+LVK   TRHPLV  
Subjt:  MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFGLLILRELKLDVHRSSSKLYVLLDYGQST--PPFEILEDKDVDWFLTLVKNNGTRHPLV--

Query:  --VDVKDFYLEGTS--SSVVSNSTLLVSSSTVDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSNQAVEFQC
            V D  LE +S   S + N   L+ SS++DD+      F ++ DI    L   F++  KD FASKE+L   F Y+A+KNNFEF+T RS+++++EF+C
Subjt:  --VDVKDFYLEGTS--SSVVSNSTLLVSSSTVDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSNQAVEFQC

Query:  CKADCLWNVKASRFKDSDLWIFRKYVSIHNC
         + +C W V+ASR+K  +LW  RKY++ HNC
Subjt:  CKADCLWNVKASRFKDSDLWIFRKYVSIHNC

A0A5D3DJR8 MuDR family transposase2.8e-5149.78Show/hide
Query:  MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFGLLILRELKLDVHRSSSKLYVLLDYG--QSTPPFEILEDKDVDWFLTLVKNNGTRHPLV--
        M K+PIVVFH GQW+   SY  YK +GVLVDE+MSFE FG LILRE++ D   SS +L +LLDYG        +I EDKDV WFL+LVK   TRHPLV  
Subjt:  MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFGLLILRELKLDVHRSSSKLYVLLDYG--QSTPPFEILEDKDVDWFLTLVKNNGTRHPLV--

Query:  --VDVKDFYLEGTS--SSVVSNSTLLVSSSTVDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSNQAVEFQC
          V V +  LE +S   S + N   L+SSS++DD+      F ++ DI    L   F++  KD FASKE+L   F Y+A+KNNFEF+T RS+++++EF+C
Subjt:  --VDVKDFYLEGTS--SSVVSNSTLLVSSSTVDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLAVKNNFEFRTPRSSNQAVEFQC

Query:  CKADCLWNVKASRFKDSDLWIFRKYVSIHNC
         + +C W V+ASR+K  +LW  RKY++ HNC
Subjt:  CKADCLWNVKASRFKDSDLWIFRKYVSIHNC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAGATTCCTATTGTTGTCTTCCATGGTGGGCAATGGAATGCTAATGGTTCTTATGAGAAGTATAAGATTAGTGGAGTTTTGGTGGATGAACTAATGAGTTTTGA
AACTTTTGGTTTGCTGATTTTAAGAGAATTAAAATTGGATGTACATCGATCTTCTTCAAAATTATATGTTTTATTGGATTATGGCCAAAGTACCCCCCCTTTTGAAATTT
TGGAAGATAAAGACGTAGACTGGTTCTTAACATTAGTTAAGAATAATGGTACAAGACATCCATTAGTGGTTGATGTTAAGGACTTTTATTTAGAAGGGACATCTAGTAGT
GTTGTTAGCAATTCAACTTTGTTGGTGTCTTCCTCAACTGTAGATGATAACGATGGTGATGGTGTGCCTTTTCATGTCATTAAAGATATTCGGTTGGATTGTGTCTTTAA
TGTAAAAGATACATTTGCTAGCAAAGAAGTATTGTGTAGTTGTTTTAAATACTTGGCTGTGAAAAATAATTTTGAGTTCAGGACTCCTAGATCCAGCAATCAAGCAGTTG
AGTTTCAATGTTGCAAAGCTGATTGTTTATGGAATGTTAAGGCATCTCGTTTCAAGGATAGTGATTTATGGATCTTTAGGAAGTACGTTTCTATTCATAATTGCTTATAC
AGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAAGATTCCTATTGTTGTCTTCCATGGTGGGCAATGGAATGCTAATGGTTCTTATGAGAAGTATAAGATTAGTGGAGTTTTGGTGGATGAACTAATGAGTTTTGA
AACTTTTGGTTTGCTGATTTTAAGAGAATTAAAATTGGATGTACATCGATCTTCTTCAAAATTATATGTTTTATTGGATTATGGCCAAAGTACCCCCCCTTTTGAAATTT
TGGAAGATAAAGACGTAGACTGGTTCTTAACATTAGTTAAGAATAATGGTACAAGACATCCATTAGTGGTTGATGTTAAGGACTTTTATTTAGAAGGGACATCTAGTAGT
GTTGTTAGCAATTCAACTTTGTTGGTGTCTTCCTCAACTGTAGATGATAACGATGGTGATGGTGTGCCTTTTCATGTCATTAAAGATATTCGGTTGGATTGTGTCTTTAA
TGTAAAAGATACATTTGCTAGCAAAGAAGTATTGTGTAGTTGTTTTAAATACTTGGCTGTGAAAAATAATTTTGAGTTCAGGACTCCTAGATCCAGCAATCAAGCAGTTG
AGTTTCAATGTTGCAAAGCTGATTGTTTATGGAATGTTAAGGCATCTCGTTTCAAGGATAGTGATTTATGGATCTTTAGGAAGTACGTTTCTATTCATAATTGCTTATAC
AGTTGA
Protein sequenceShow/hide protein sequence
MDKIPIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFGLLILRELKLDVHRSSSKLYVLLDYGQSTPPFEILEDKDVDWFLTLVKNNGTRHPLVVDVKDFYLEGTSSS
VVSNSTLLVSSSTVDDNDGDGVPFHVIKDIRLDCVFNVKDTFASKEVLCSCFKYLAVKNNFEFRTPRSSNQAVEFQCCKADCLWNVKASRFKDSDLWIFRKYVSIHNCLY
S