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Sed0024925 (gene) of Chayote v1 genome

Gene IDSed0024925
OrganismSechium edule (Chayote v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic
Genome locationLG13:18545764..18547160
RNA-Seq ExpressionSed0024925
SyntenySed0024925
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0043229 - intracellular organelle (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF1858927.1 hypothetical protein Lal_00000747 [Lupinus albus]2.3e-7064.34Show/hide
Query:  MSSQLLRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLH--------------------LARGQSSGLLPLLGSLRFHVLFHSPMGVLFTLPSRYY
        MSSQLL LNAFRGEPASSG EWHFTPNHNSSADS TSVGSDLH                    L   Q+ G  P LGS   H L     G +F    R+ 
Subjt:  MSSQLLRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLH--------------------LARGQSSGLLPLLGSLRFHVLFHSPMGVLFTLPSRYY

Query:  FTIGHP-GVFSL--ARWSLLIHTGFHVP----HATRVRA----------LLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGS
        F    P G  SL   +  L +  G+  P     A R+ +          LLPFRSPLLRESLLLSFPLATKMFQFA LSLACPWIQQQFE+LTYSGISGS
Subjt:  FTIGHP-GVFSL--ARWSLLIHTGFHVP----HATRVRA----------LLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGS

Query:  TLIFNSPKHFVAYYALPRLWVPRSNCRIGKMECYHIALYRLSSRVGDKRTRTADIRHR
        TLIFNSPKHFVAYY LPRLWVPRSNCRIGK+ CYHIALYRLSSRVGDKRTRTADIRHR
Subjt:  TLIFNSPKHFVAYYALPRLWVPRSNCRIGKMECYHIALYRLSSRVGDKRTRTADIRHR

KAF1888201.1 hypothetical protein Lal_00030082, partial [Lupinus albus]7.3e-7265.73Show/hide
Query:  MSSQLLRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLHLARGQ----------SSGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFS
        MS+QLL LNAFRGEP S+  EWHFT NHNSSADSSTSV SDLHL   +           +GLLPLLGSL+FHVLFHSPMGVLFTLPS YYFTIGH GVFS
Subjt:  MSSQLLRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLHLARGQ----------SSGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFS

Query:  LARWS----------LLI---HTGFHVP----HATRVRA----------LLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGS
        LARWS          LL+   H G ++      A R+ +          LLPF SPLLRESL + FP ATKM     LSLACPWIQ+ FE+LTYSGISGS
Subjt:  LARWS----------LLI---HTGFHVP----HATRVRA----------LLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGS

Query:  TLIFNSPKHFVAYYALPRLWVPRSNCRIGKMECYHIALYRLSSRVGDK
        TLIFNS KHF AYYALPRLWVPRSN RIGK+  YHIALYRLSSRVG+K
Subjt:  TLIFNSPKHFVAYYALPRLWVPRSNCRIGKMECYHIALYRLSSRVGDK

KAF3449759.1 hypothetical protein FNV43_RR05837 [Rhamnella rubrinervis]3.3e-7296.55Show/hide
Query:  LHLARGQSSGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLLIHTGFHVPHATRVRALLPFRSPLLRESLLLSFPLATKMFQFARL
        L  ARGQS GLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLLIHTGFHV HATRVRALLPFRSPLL ESLLLSFPLATKMFQFARL
Subjt:  LHLARGQSSGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLLIHTGFHVPHATRVRALLPFRSPLLRESLLLSFPLATKMFQFARL

Query:  SLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPR
        SLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPR
Subjt:  SLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPR

KAG4211951.1 hypothetical protein ERO13_A02G134101v2 [Gossypium hirsutum]1.6e-7475.85Show/hide
Query:  HFTPNHNSSADSSTSVGSDLH-------LARGQSSGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLLIHTGFHVPHATRVRALLP
        HF  N  +   S  S  +  H        ARGQS GLLPLLGSLRFHVLFHSP GVLFTLPSRYYF IGHPGVFSLAR SLLIHTGFHVPHATRVRALLP
Subjt:  HFTPNHNSSADSSTSVGSDLH-------LARGQSSGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLLIHTGFHVPHATRVRALLP

Query:  FRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRSNCRIGKMECYHIALYRLSSRVGDKRTRT
        F SPLLRESLLLSFP ATKMFQFARLSL CPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVP                   SSRVGDKRTRT
Subjt:  FRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRSNCRIGKMECYHIALYRLSSRVGDKRTRT

Query:  ADIRHRL
        ADIRHR+
Subjt:  ADIRHRL

YP_009526534.1 hypothetical protein [Ammopiptanthus mongolicus]8.3e-7673.21Show/hide
Query:  QLLRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLHLARGQSSGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLL------
        Q+L++ AF   P  S    +    + S A SST   S+        +GLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLA    L      
Subjt:  QLLRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLHLARGQSSGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLL------

Query:  IHTGFHVPHATRVRALLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRSNCRIGKMECY
        +++    P  +R R LLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFE+LTYSGISGSTLIFNSPKHFVAYYALPRLWVPRSNCRIGK+ CY
Subjt:  IHTGFHVPHATRVRALLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRSNCRIGKMECY

Query:  HIALYRLSSRVGDKRTRTADIRHR
        HIALYRLSSRVGDKRTRTADIRHR
Subjt:  HIALYRLSSRVGDKRTRTADIRHR

TrEMBL top hitse value%identityAlignment
A0A2N9FRF2 Uncharacterized protein4.4e-8377.58Show/hide
Query:  HFTPNHNSSADSSTSVGSDLH-------LARGQSSGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLL------IHTGFHVPHATR
        HF  N  +   S  S  +  H        ARGQS GLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSL    LL      ++     P  +R
Subjt:  HFTPNHNSSADSSTSVGSDLH-------LARGQSSGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLL------IHTGFHVPHATR

Query:  VRALLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRSNCRIGKMECYHIALYRLSSRVG
         R LLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRSNCRIGK+ CYHIALYRLSSRVG
Subjt:  VRALLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRSNCRIGKMECYHIALYRLSSRVG

Query:  DKRTRTADIRHRLQENQERRAFP
        DKRTRTADIRHRLQENQER+A P
Subjt:  DKRTRTADIRHRLQENQERRAFP

A0A2N9H1D9 Uncharacterized protein4.3e-7877.36Show/hide
Query:  HFTPNHNSSADSSTSVGSDLH-------LARGQSSGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLL------IHTGFHVPHATR
        HF  N  +   S  S  +  H        ARGQS GLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSL    LL      ++     P  +R
Subjt:  HFTPNHNSSADSSTSVGSDLH-------LARGQSSGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLL------IHTGFHVPHATR

Query:  VRALLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRSNCRIGKMECYHIALYRLSSRVG
         R LLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRSNCRIGK+ CYHIALYRLSSRVG
Subjt:  VRALLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRSNCRIGKMECYHIALYRLSSRVG

Query:  DKRTRTADIRHR
        DKRTRTADIRHR
Subjt:  DKRTRTADIRHR

A0A2N9I3B0 Uncharacterized protein4.4e-8377.58Show/hide
Query:  HFTPNHNSSADSSTSVGSDLH-------LARGQSSGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLL------IHTGFHVPHATR
        HF  N  +   S  S  +  H        ARGQS GLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSL    LL      ++     P  +R
Subjt:  HFTPNHNSSADSSTSVGSDLH-------LARGQSSGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLL------IHTGFHVPHATR

Query:  VRALLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRSNCRIGKMECYHIALYRLSSRVG
         R LLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRSNCRIGK+ CYHIALYRLSSRVG
Subjt:  VRALLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRSNCRIGKMECYHIALYRLSSRVG

Query:  DKRTRTADIRHRLQENQERRAFP
        DKRTRTADIRHRLQENQER+A P
Subjt:  DKRTRTADIRHRLQENQERRAFP

A0A385G270 Uncharacterized protein4.0e-7673.21Show/hide
Query:  QLLRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLHLARGQSSGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLL------
        Q+L++ AF   P  S    +    + S A SST   S+        +GLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLA    L      
Subjt:  QLLRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLHLARGQSSGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLL------

Query:  IHTGFHVPHATRVRALLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRSNCRIGKMECY
        +++    P  +R R LLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFE+LTYSGISGSTLIFNSPKHFVAYYALPRLWVPRSNCRIGK+ CY
Subjt:  IHTGFHVPHATRVRALLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRSNCRIGKMECY

Query:  HIALYRLSSRVGDKRTRTADIRHR
        HIALYRLSSRVGDKRTRTADIRHR
Subjt:  HIALYRLSSRVGDKRTRTADIRHR

A0A6A5NK39 Uncharacterized protein (Fragment)3.5e-7265.73Show/hide
Query:  MSSQLLRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLHLARGQ----------SSGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFS
        MS+QLL LNAFRGEP S+  EWHFT NHNSSADSSTSV SDLHL   +           +GLLPLLGSL+FHVLFHSPMGVLFTLPS YYFTIGH GVFS
Subjt:  MSSQLLRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLHLARGQ----------SSGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFS

Query:  LARWS----------LLI---HTGFHVP----HATRVRA----------LLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGS
        LARWS          LL+   H G ++      A R+ +          LLPF SPLLRESL + FP ATKM     LSLACPWIQ+ FE+LTYSGISGS
Subjt:  LARWS----------LLI---HTGFHVP----HATRVRA----------LLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGS

Query:  TLIFNSPKHFVAYYALPRLWVPRSNCRIGKMECYHIALYRLSSRVGDK
        TLIFNS KHF AYYALPRLWVPRSN RIGK+  YHIALYRLSSRVG+K
Subjt:  TLIFNSPKHFVAYYALPRLWVPRSNCRIGKMECYHIALYRLSSRVGDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAGTCAACTGCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACATC
AGTCGGTTCGGACCTCCACTTAGCACGCGGTCAGAGTTCTGGTCTCCTCCCACTGCTTGGAAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATGGGGGTTCTTTTCA
CCCTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCGGGTC
AGAGCGCTGCTCCCATTTCGCTCGCCGCTACTACGGGAATCGCTTTTGCTTTCTTTTCCTCTGGCTACTAAGATGTTTCAGTTCGCCAGGTTGTCTCTTGCCTGCCCATG
GATTCAGCAGCAGTTTGAAAGGTTGACCTATTCGGGAATCTCCGGATCTACGCTTATTTTCAACTCCCCGAAGCATTTCGTCGCTTACTACGCCCTTCCTCGTCTCTGGG
TGCCTAGATCGAACTGCCGAATCGGAAAAATGGAGTGCTATCATATAGCTTTGTATCGGCTAAGTTCACGAGTTGGAGATAAGCGGACTCGAACCGCTGACATCCGCCAC
AGGCTACAGGAGAACCAGGAACGGAGAGCTTTCCCCCCTTTTCCGCCCGCCTCTTTGGTCTTAAGAATGCTGGTTTTAAGAATGAGTGATTGCCCTTCTCCGACCCTTAC
TGCCCAACCGGAGAGCGGACAGCTAATGCGTTCCACTTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCAGTCAACTGCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACATC
AGTCGGTTCGGACCTCCACTTAGCACGCGGTCAGAGTTCTGGTCTCCTCCCACTGCTTGGAAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATGGGGGTTCTTTTCA
CCCTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCGGGTC
AGAGCGCTGCTCCCATTTCGCTCGCCGCTACTACGGGAATCGCTTTTGCTTTCTTTTCCTCTGGCTACTAAGATGTTTCAGTTCGCCAGGTTGTCTCTTGCCTGCCCATG
GATTCAGCAGCAGTTTGAAAGGTTGACCTATTCGGGAATCTCCGGATCTACGCTTATTTTCAACTCCCCGAAGCATTTCGTCGCTTACTACGCCCTTCCTCGTCTCTGGG
TGCCTAGATCGAACTGCCGAATCGGAAAAATGGAGTGCTATCATATAGCTTTGTATCGGCTAAGTTCACGAGTTGGAGATAAGCGGACTCGAACCGCTGACATCCGCCAC
AGGCTACAGGAGAACCAGGAACGGAGAGCTTTCCCCCCTTTTCCGCCCGCCTCTTTGGTCTTAAGAATGCTGGTTTTAAGAATGAGTGATTGCCCTTCTCCGACCCTTAC
TGCCCAACCGGAGAGCGGACAGCTAATGCGTTCCACTTATTGA
Protein sequenceShow/hide protein sequence
MSSQLLRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLHLARGQSSGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLLIHTGFHVPHATRV
RALLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRSNCRIGKMECYHIALYRLSSRVGDKRTRTADIRH
RLQENQERRAFPPFPPASLVLRMLVLRMSDCPSPTLTAQPESGQLMRSTY