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Sed0024946 (gene) of Chayote v1 genome

Gene IDSed0024946
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:1531235..1535989
RNA-Seq ExpressionSed0024946
SyntenySed0024946
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576804.1 hypothetical protein SDJN03_24378, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1059.7Show/hide
Query:  MASPTALVAWNKAIFFAFFLLAFTISARELVGTNVVVRMTREMAMKTNDAM-GRRLVARQLDFPWKG
        MASPTALVAW K  F  F L+A ++SAREL G NVV R  REMA   N  + G RL+ARQLD  W+G
Subjt:  MASPTALVAWNKAIFFAFFLLAFTISARELVGTNVVVRMTREMAMKTNDAM-GRRLVARQLDFPWKG

KAG6600178.1 hypothetical protein SDJN03_05411, partial [Cucurbita argyrosperma subsp. sororia]1.0e-1160.61Show/hide
Query:  MASPTALVAWNKAIFFAFFLLAFTISARELVGTNVVVRMTREMAMKTNDAMGRRLVARQLDFPWKG
        MASP+A V W + +FFA  LLAF +SARELVGTN+V R   EM ++TN  +GRRL+ARQLD  W G
Subjt:  MASPTALVAWNKAIFFAFFLLAFTISARELVGTNVVVRMTREMAMKTNDAMGRRLVARQLDFPWKG

KAG7014831.1 hypothetical protein SDJN02_22460, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-1059.7Show/hide
Query:  MASPTALVAWNKAIFFAFFLLAFTISARELVGTNVVVRMTREMAMKTNDA-MGRRLVARQLDFPWKG
        MASPTALVAW K  F  F L+A ++SAREL G NVV R  REMA   N   +G RL+ARQLD  W+G
Subjt:  MASPTALVAWNKAIFFAFFLLAFTISARELVGTNVVVRMTREMAMKTNDA-MGRRLVARQLDFPWKG

KAG7030841.1 hypothetical protein SDJN02_04878 [Cucurbita argyrosperma subsp. argyrosperma]1.0e-1160.61Show/hide
Query:  MASPTALVAWNKAIFFAFFLLAFTISARELVGTNVVVRMTREMAMKTNDAMGRRLVARQLDFPWKG
        MASP+A V W + +FFA  LLAF +SARELVGTN+V R   EM ++TN  +GRRL+ARQLD  W G
Subjt:  MASPTALVAWNKAIFFAFFLLAFTISARELVGTNVVVRMTREMAMKTNDAMGRRLVARQLDFPWKG

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCACCAACAGCTTTGGTTGCTTGGAACAAAGCTATCTTCTTCGCTTTTTTTCTTCTTGCTTTCACCATTTCTGCTCGGGAACTTGTTGGCACCAATGTCGTGGT
TCGCATGACTCGCGAGATGGCAATGAAAACTAATGATGCGATGGGCAGACGATTAGTTGCTCGACAATTGGATTTTCCTTGGAAAGGAGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATCCCCCAATTATATGTCTATTGGTTTAGTTAATAAATACCCATCAAAGCCTTTCTAGTTCCACATATAACTTTTGAGCTTTCTACAATCACAAGCAAATGGCTTCACCA
ACAGCTTTGGTTGCTTGGAACAAAGCTATCTTCTTCGCTTTTTTTCTTCTTGCTTTCACCATTTCTGCTCGGGAACTTGTTGGCACCAATGTCGTGGTTCGCATGACTCG
CGAGATGGCAATGAAAACTAATGATGCGATGGGCAGACGATTAGTTGCTCGACAATTGGATTTTCCTTGGAAAGGAGGTTGATAAAAATTATCTACATGAAATCATTTAG
GGACATAGATCAATTGAAAAAGGAAAACCTCAAGCCTCAAGGTAATAGTTTTGGTTTTATTTAACTTATTTATCGTTTAATCTGAAAACTTTATTTATACTTTTATTTAT
TGATGCAAGTTATGTGTCAGAAGCTCAATCAAGGTGGAGCCTCGTCGAGCTTGGTATGTCTACTTGTTCATTTGTTTAGTTGCCTATGTATCTTGCTTAGAGTATACTAT
AAATAATTTTAATAGAAATTTTGTATGTGTGGTGGCTAACCTGCAGCAAAGTTGGCCACTAAATGTTGGATTATTCTTGTTGAATATATATATCATGTAGCAAAATTAGT
CACTATATTGAACAAACAAGTGTATTATTTTTTTGGATAACTTGTATATATGTCGTTATGCTGCCGAAAATTTTATAATTGGAATTAACTTTCTTTTTTTATGAGGGT
Protein sequenceShow/hide protein sequence
MASPTALVAWNKAIFFAFFLLAFTISARELVGTNVVVRMTREMAMKTNDAMGRRLVARQLDFPWKGG