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Sed0024950 (gene) of Chayote v1 genome

Gene IDSed0024950
OrganismSechium edule (Chayote v1)
DescriptionAP-3 complex subunit delta
Genome locationLG08:35785663..35788297
RNA-Seq ExpressionSed0024950
SyntenySed0024950
Gene Ontology termsGO:0006623 - protein targeting to vacuole (biological process)
GO:0006896 - Golgi to vacuole transport (biological process)
GO:0005794 - Golgi apparatus (cellular component)
GO:0010008 - endosome membrane (cellular component)
GO:0030123 - AP-3 adaptor complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137481.1 AP-3 complex subunit delta [Cucumis sativus]3.1e-0874.51Show/hide
Query:  PLVVRLNEGDELPIISKKAQLKYEQLSDAVCDVLEGSDTNTRPTSSQTNQS
        P+VVRL+EGDELP+  KK QL  EQLSDAV DVL GSD   RPTSSQTNQS
Subjt:  PLVVRLNEGDELPIISKKAQLKYEQLSDAVCDVLEGSDTNTRPTSSQTNQS
XP_008459026.1 PREDICTED: AP-3 complex subunit delta [Cucumis melo]1.2e-0772.55Show/hide
Query:  PLVVRLNEGDELPIISKKAQLKYEQLSDAVCDVLEGSDTNTRPTSSQTNQS
        P+VVRL+EGDELP+  KK QL  EQLSDAV DVL GSD   RPTSSQT+QS
Subjt:  PLVVRLNEGDELPIISKKAQLKYEQLSDAVCDVLEGSDTNTRPTSSQTNQS
XP_022137424.1 AP-3 complex subunit delta [Momordica charantia]4.5e-0772.55Show/hide
Query:  PLVVRLNEGDELPIISKKAQLKYEQLSDAVCDVLEGSDTNTRPTSSQTNQS
        P+VVRL+EGDELPI  KK Q K + LSDAV DVL GS  N RPTSSQTNQS
Subjt:  PLVVRLNEGDELPIISKKAQLKYEQLSDAVCDVLEGSDTNTRPTSSQTNQS
XP_023542505.1 AP-3 complex subunit delta-like [Cucurbita pepo subsp. pepo]7.0e-0872.55Show/hide
Query:  PLVVRLNEGDELPIISKKAQLKYEQLSDAVCDVLEGSDTNTRPTSSQTNQS
        P+VVRL EGDELP++ KK QLK E+LSDAV  VLEGSD   RPTSSQT QS
Subjt:  PLVVRLNEGDELPIISKKAQLKYEQLSDAVCDVLEGSDTNTRPTSSQTNQS
XP_038894508.1 AP-3 complex subunit delta [Benincasa hispida]5.4e-0872.55Show/hide
Query:  PLVVRLNEGDELPIISKKAQLKYEQLSDAVCDVLEGSDTNTRPTSSQTNQS
        P+VVRL+EGDE P+ SKK QL  EQLSDAV DVL GSD   RPTSSQTNQ+
Subjt:  PLVVRLNEGDELPIISKKAQLKYEQLSDAVCDVLEGSDTNTRPTSSQTNQS
TrEMBL top hitse value%identityAlignment
A0A0A0LQE4 AP-3 complex subunit delta1.5e-0874.51Show/hide
Query:  PLVVRLNEGDELPIISKKAQLKYEQLSDAVCDVLEGSDTNTRPTSSQTNQS
        P+VVRL+EGDELP+  KK QL  EQLSDAV DVL GSD   RPTSSQTNQS
Subjt:  PLVVRLNEGDELPIISKKAQLKYEQLSDAVCDVLEGSDTNTRPTSSQTNQS
A0A1S3C9S7 AP-3 complex subunit delta5.8e-0872.55Show/hide
Query:  PLVVRLNEGDELPIISKKAQLKYEQLSDAVCDVLEGSDTNTRPTSSQTNQS
        P+VVRL+EGDELP+  KK QL  EQLSDAV DVL GSD   RPTSSQT+QS
Subjt:  PLVVRLNEGDELPIISKKAQLKYEQLSDAVCDVLEGSDTNTRPTSSQTNQS
A0A5D3BLE5 AP-3 complex subunit delta5.8e-0872.55Show/hide
Query:  PLVVRLNEGDELPIISKKAQLKYEQLSDAVCDVLEGSDTNTRPTSSQTNQS
        P+VVRL+EGDELP+  KK QL  EQLSDAV DVL GSD   RPTSSQT+QS
Subjt:  PLVVRLNEGDELPIISKKAQLKYEQLSDAVCDVLEGSDTNTRPTSSQTNQS
A0A6J1C773 AP-3 complex subunit delta2.2e-0772.55Show/hide
Query:  PLVVRLNEGDELPIISKKAQLKYEQLSDAVCDVLEGSDTNTRPTSSQTNQS
        P+VVRL+EGDELPI  KK Q K + LSDAV DVL GS  N RPTSSQTNQS
Subjt:  PLVVRLNEGDELPIISKKAQLKYEQLSDAVCDVLEGSDTNTRPTSSQTNQS
A0A6J1KEX8 AP-3 complex subunit delta2.9e-0768.63Show/hide
Query:  PLVVRLNEGDELPIISKKAQLKYEQLSDAVCDVLEGSDTNTRPTSSQTNQS
        P+VVRL+EGDELP++ KK Q K EQLSDA+ +VL GSD    PTSSQTNQS
Subjt:  PLVVRLNEGDELPIISKKAQLKYEQLSDAVCDVLEGSDTNTRPTSSQTNQS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATGATGCCCGTCTTGTCAAGCTTGCAGAACGGTCACTTGCATTCAAGAAAATGTCTAATTCTAATTCAGCCAATCCTGCCTCTGGTGGTGAGATTGAATGAAGG
AGATGAATTGCCTATTATTAGTAAGAAGGCACAGTTGAAATATGAGCAGCTTTCTGATGCAGTATGTGATGTTCTTGAAGGTAGCGATACCAATACGAGGCCTACTTCCT
CCCAAACAAATCAATCTTTCAGAGACCCTCTAGTAGGAGAAAAGGAAAGCAGAAACAGGATGCTGATAATCTTTTTGAATCAAAATAAGATTTGGTTGATGCTGAAGAGC
AATCAAATAAGATAG
mRNA sequenceShow/hide mRNA sequence
CAATTTCTTCGATTTCTCATATTTCCCCAATTTTCCAGCCTTTCAATTCAACCATGAAATTCTACCCCAAATTCCCATCTGGGTATTGGCTACACAGACTAATAAGAAAG
CGTAAAGTGAGCATCGAGCTATTCCATCGCTATCAATGCCAGGTTCCTCTTTCATGGACATTCTGTTCAAGCGAACTCTTAATCCATGGACAAGATTCGGTCCCTTCACG
GCGTCGATATGAACTGGGCTGCTTTCCATGTCGTCGAGTGATAACTGAAGGCTCTCTTCGTTTGGAAGTTCTCTATGTGAGGAAAGGGTTGATTCATCTATAATATCCTA
ACTGAGCCAGGAGTGTCTGAATCATCAATTTCAACCACATCATTTGTGTTCGATTAAAGGAGAGATGGTTGGCATTTCCCCTGACAGGGTCGGGAACAGCCTTCGGGCTT
CCCTGTTAACACACCTGGTTGAGGCTACCCACCTCTTGCAGGTGGATCGATAACCACATCTCTTCTCTCTGAGCCCCGTAAGCGACATGGACTGTATTATCTTCCATCAG
ATATGACTGATGATGCCAATAATGGATGATCCACCAGCCAACAAACTCAAGTTAGAAGATAATATGGATGATGATGATGCCCGTCTTGTCAAGCTTGCAGAACGGTCACT
TGCATTCAAGAAAATGTCTAATTCTAATTCAGCCAATCCTGCCTCTGGTGGTGAGATTGAATGAAGGAGATGAATTGCCTATTATTAGTAAGAAGGCACAGTTGAAATAT
GAGCAGCTTTCTGATGCAGTATGTGATGTTCTTGAAGGTAGCGATACCAATACGAGGCCTACTTCCTCCCAAACAAATCAATCTTTCAGAGACCCTCTAGTAGGAGAAAA
GGAAAGCAGAAACAGGATGCTGATAATCTTTTTGAATCAAAATAAGATTTGGTTGATGCTGAAGAGCAATCAAATAAGATAGATACAAGTTCGAGAAGAACACATCGACG
TCACGGAAAAGATGCAAGCAATCATGTCTGGAAAAGAGTAGTGAGAAAAAAGATCAACCTCGTAATAAAGGTAAGATAACAAGTAGTCAATGGAACGGTAGCCATAAAAC
TAAACGAATGGGAGATGCTTCATTACCTGTGACTTCACATACAGTTATACCAGATTTCTTTCTATAGCTCGAAAAACCCGAATGAGATTTTCTACAGAACATCCCAGCAT
CAATGATTGTTTGATTTCCAATACTCATGTACCATGGTTAGTTCTACTGTAAAAATTTATTGATTTTTTGGTGTATATTTGGGGGGTGTGTTTTTGGATTCATATGTTCC
AGAATGGATATCCATTTCAAAAACAGAGTTTCAAACTTGGATTATCTGGTTTCTAGTATTAACATGATTAATTTTTTTGAT
Protein sequenceShow/hide protein sequence
MMMMPVLSSLQNGHLHSRKCLILIQPILPLVVRLNEGDELPIISKKAQLKYEQLSDAVCDVLEGSDTNTRPTSSQTNQSFRDPLVGEKESRNRMLIIFLNQNKIWLMLKS
NQIR