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Sed0024979 (gene) of Chayote v1 genome

Gene IDSed0024979
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG14:2034873..2035103
RNA-Seq ExpressionSed0024979
SyntenySed0024979
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1205651.1 hypothetical protein CJ030_MR7G017823 [Morella rubra]7.0e-0445.57Show/hide
Query:  GTGKSSRGSGSGVAHAGISSGVKTFASTAGTGASS-----TGLMVAPGSEGKEYISRVGFENNPAAYFEDKRAADKNAK
        G GK  RG GSG +  G+        S+ G G+SS     +G+MVAPGSEG  YISR  FE+NP  YF   R+ +K  K
Subjt:  GTGKSSRGSGSGVAHAGISSGVKTFASTAGTGASS-----TGLMVAPGSEGKEYISRVGFENNPAAYFEDKRAADKNAK
TrEMBL top hitse value%identityAlignment
A0A6A1UZ81 Uncharacterized protein3.4e-0445.57Show/hide
Query:  GTGKSSRGSGSGVAHAGISSGVKTFASTAGTGASS-----TGLMVAPGSEGKEYISRVGFENNPAAYFEDKRAADKNAK
        G GK  RG GSG +  G+        S+ G G+SS     +G+MVAPGSEG  YISR  FE+NP  YF   R+ +K  K
Subjt:  GTGKSSRGSGSGVAHAGISSGVKTFASTAGTGASS-----TGLMVAPGSEGKEYISRVGFENNPAAYFEDKRAADKNAK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G61412.1 unknown protein5.7e-0441.89Show/hide
Query:  GTGKSSRGSGSGVAHAGISSGVKTFASTAGTGASSTGLMVAPGSEGKEYISRVGFENNPAAYFEDKRAADKNAK
        G GKS  G+G      G SSG       +G G +  G MVAPG+ G  YISR GFE+NP  YF +   + ++ K
Subjt:  GTGKSSRGSGSGVAHAGISSGVKTFASTAGTGASSTGLMVAPGSEGKEYISRVGFENNPAAYFEDKRAADKNAK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGAACAGGAAAGAGTAGTCGTGGCAGCGGTAGCGGAGTTGCCCACGCTGGTATCAGCAGTGGAGTCAAAACATTTGCCTCCACTGCTGGCACCGGTGCGAGTAG
CACCGGCTTAATGGTTGCTCCAGGGAGCGAAGGAAAGGAATATATCTCTCGAGTTGGATTTGAAAATAATCCAGCAGCTTATTTTGAGGACAAACGCGCAGCTGATAAAA
ATGCCAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGAACAGGAAAGAGTAGTCGTGGCAGCGGTAGCGGAGTTGCCCACGCTGGTATCAGCAGTGGAGTCAAAACATTTGCCTCCACTGCTGGCACCGGTGCGAGTAG
CACCGGCTTAATGGTTGCTCCAGGGAGCGAAGGAAAGGAATATATCTCTCGAGTTGGATTTGAAAATAATCCAGCAGCTTATTTTGAGGACAAACGCGCAGCTGATAAAA
ATGCCAAGTAG
Protein sequenceShow/hide protein sequence
MEGTGKSSRGSGSGVAHAGISSGVKTFASTAGTGASSTGLMVAPGSEGKEYISRVGFENNPAAYFEDKRAADKNAK