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Sed0024987 (gene) of Chayote v1 genome

Gene IDSed0024987
OrganismSechium edule (Chayote v1)
Descriptionacanthoscurrin-2-like
Genome locationLG05:1084750..1085379
RNA-Seq ExpressionSed0024987
SyntenySed0024987
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008447334.1 PREDICTED: acanthoscurrin-2-like [Cucumis melo]1.1e-1770.08Show/hide
Query:  MAN-KLNVILVLAMSMAAFACHVAARAAPNDGAKGLNDQKNFFTYGGLGAFSGLGGGNGGLGGGGGLGGLGGGIGGLGGGGGFNGLGGGIGGYGGGGSGG
        MAN KLN++LV  M+MAA A HVAAR APN+ AKGLNDQKNF  YGG+G FSG+  G+GGL  GGG GG     GGLGGGGG  GLGGG+GG+GG G GG
Subjt:  MAN-KLNVILVLAMSMAAFACHVAARAAPNDGAKGLNDQKNFFTYGGLGAFSGLGGGNGGLGGGGGLGGLGGGIGGLGGGGGFNGLGGGIGGYGGGGSGG

Query:  IGGGVGGGVLGRIGGIGGIGGGFVKIP
        IGGGVGGGV+G IGGIGG GGG VK+P
Subjt:  IGGGVGGGVLGRIGGIGGIGGGFVKIP

XP_011652144.1 glycine-rich cell wall structural protein 1 [Cucumis sativus]3.7e-1870.31Show/hide
Query:  MAN-KLNVILVLAMSMAAFACHVAARAAPND-GAKGLNDQKNFFTYGGLGAFSGLGGGNGGLGGGGGLGGLGGGIGGLGGGGGFNGLGGGIGGYGGGGSG
        MAN KLN++LV+AM+MAAFA HV AR  PND  AKGLNDQKNF  YGG+G FSG+  G+ GL  GGG+GG     GGLGGGGG  GLGGGIGG+GG G G
Subjt:  MAN-KLNVILVLAMSMAAFACHVAARAAPND-GAKGLNDQKNFFTYGGLGAFSGLGGGNGGLGGGGGLGGLGGGIGGLGGGGGFNGLGGGIGGYGGGGSG

Query:  GIGGGVGGGVLGRIGGIGGIGGGFVKIP
        GIGGGVGGGV+G IGGIGG GGG VK+P
Subjt:  GIGGGVGGGVLGRIGGIGGIGGGFVKIP

XP_022931134.1 acanthoscurrin-2-like [Cucurbita moschata]1.7e-1560.67Show/hide
Query:  MANKLNVILVLAMSMAAFACHVAARAAPNDGAKGLNDQKNFFTYGGLGAF----------------------SGLGGGNGGLGGGGGLGGLGGGIGGLGG
        MAN+L +++ +AM M AFA  V AR APNDGAK ++DQKNF  YGG+G F                      SG+GGG GGLGGGGGLGGLGGGIGG GG
Subjt:  MANKLNVILVLAMSMAAFACHVAARAAPNDGAKGLNDQKNFFTYGGLGAF----------------------SGLGGGNGGLGGGGGLGGLGGGIGGLGG

Query:  GGGFNGLGGGIGGYGGGGS-GGIGGGVGGGVLGRIGGIG-GIGGGFVKIP
        GGG  GLGGGIGGYGGGG  GG+GGG+GG   G  GGIG G+GG FVKIP
Subjt:  GGGFNGLGGGIGGYGGGGS-GGIGGGVGGGVLGRIGGIG-GIGGGFVKIP

XP_023532938.1 acanthoscurrin-2-like [Cucurbita pepo subsp. pepo]2.2e-1554.76Show/hide
Query:  MANKLNVILVLAMSMAAFACHVAARAAPNDGAKGLNDQKNFFTYGGLGAFSGL---------------------------GGGNGGLGGGGGLGGLGGGI
        MAN+L +++ +AM M AFA  V AR APNDGAK ++DQKNF  YGG+G FSG+                           GGG GGLGGGGGLGGLGGGI
Subjt:  MANKLNVILVLAMSMAAFACHVAARAAPNDGAKGLNDQKNFFTYGGLGAFSGL---------------------------GGGNGGLGGGGGLGGLGGGI

Query:  GGLGGGGGFNGLGGGIGGYGGGGS-GGIGGGVG--------GGVLGRIGGIG------GIGGGFVKIP
        GG GGGGG  GLGGGIGG+GGGG  GG+GGG+G        GG+ G IGG G      G+GGGFVKIP
Subjt:  GGLGGGGGFNGLGGGIGGYGGGGS-GGIGGGVG--------GGVLGRIGGIG------GIGGGFVKIP

XP_038887967.1 acanthoscurrin-1-like [Benincasa hispida]1.0e-1566.14Show/hide
Query:  MAN-KLNVILVLAMSMAAFACHVAARAAPNDGAKGLNDQKNFFTYGGLGAFSGLGGGNGGLGGGGGLGGLGGGIGGLGGGGGFNGLGGGIGGYGGGGSGG
        MAN KLN++LV  M+MAAFA HVAAR APN+  KGLNDQKNF  YGG+G   G+G      GGGGG+GG     GGLGGGGG  GLGGGIGG GG G GG
Subjt:  MAN-KLNVILVLAMSMAAFACHVAARAAPNDGAKGLNDQKNFFTYGGLGAFSGLGGGNGGLGGGGGLGGLGGGIGGLGGGGGFNGLGGGIGGYGGGGSGG

Query:  IGGGVGGGVLGRIGGIGGIGGGFVKIP
        IGGG+GGGV+G IGG    GGGFVK+P
Subjt:  IGGGVGGGVLGRIGGIGGIGGGFVKIP

TrEMBL top hitse value%identityAlignment
A0A0A0LEM4 Uncharacterized protein1.8e-1870.31Show/hide
Query:  MAN-KLNVILVLAMSMAAFACHVAARAAPND-GAKGLNDQKNFFTYGGLGAFSGLGGGNGGLGGGGGLGGLGGGIGGLGGGGGFNGLGGGIGGYGGGGSG
        MAN KLN++LV+AM+MAAFA HV AR  PND  AKGLNDQKNF  YGG+G FSG+  G+ GL  GGG+GG     GGLGGGGG  GLGGGIGG+GG G G
Subjt:  MAN-KLNVILVLAMSMAAFACHVAARAAPND-GAKGLNDQKNFFTYGGLGAFSGLGGGNGGLGGGGGLGGLGGGIGGLGGGGGFNGLGGGIGGYGGGGSG

Query:  GIGGGVGGGVLGRIGGIGGIGGGFVKIP
        GIGGGVGGGV+G IGGIGG GGG VK+P
Subjt:  GIGGGVGGGVLGRIGGIGGIGGGFVKIP

A0A1S3BI24 acanthoscurrin-2-like5.2e-1870.08Show/hide
Query:  MAN-KLNVILVLAMSMAAFACHVAARAAPNDGAKGLNDQKNFFTYGGLGAFSGLGGGNGGLGGGGGLGGLGGGIGGLGGGGGFNGLGGGIGGYGGGGSGG
        MAN KLN++LV  M+MAA A HVAAR APN+ AKGLNDQKNF  YGG+G FSG+  G+GGL  GGG GG     GGLGGGGG  GLGGG+GG+GG G GG
Subjt:  MAN-KLNVILVLAMSMAAFACHVAARAAPNDGAKGLNDQKNFFTYGGLGAFSGLGGGNGGLGGGGGLGGLGGGIGGLGGGGGFNGLGGGIGGYGGGGSGG

Query:  IGGGVGGGVLGRIGGIGGIGGGFVKIP
        IGGGVGGGV+G IGGIGG GGG VK+P
Subjt:  IGGGVGGGVLGRIGGIGGIGGGFVKIP

A0A5A7UCJ9 Acanthoscurrin-2-like5.2e-1870.08Show/hide
Query:  MAN-KLNVILVLAMSMAAFACHVAARAAPNDGAKGLNDQKNFFTYGGLGAFSGLGGGNGGLGGGGGLGGLGGGIGGLGGGGGFNGLGGGIGGYGGGGSGG
        MAN KLN++LV  M+MAA A HVAAR APN+ AKGLNDQKNF  YGG+G FSG+  G+GGL  GGG GG     GGLGGGGG  GLGGG+GG+GG G GG
Subjt:  MAN-KLNVILVLAMSMAAFACHVAARAAPNDGAKGLNDQKNFFTYGGLGAFSGLGGGNGGLGGGGGLGGLGGGIGGLGGGGGFNGLGGGIGGYGGGGSGG

Query:  IGGGVGGGVLGRIGGIGGIGGGFVKIP
        IGGGVGGGV+G IGGIGG GGG VK+P
Subjt:  IGGGVGGGVLGRIGGIGGIGGGFVKIP

A0A6J1ETH1 acanthoscurrin-2-like8.3e-1660.67Show/hide
Query:  MANKLNVILVLAMSMAAFACHVAARAAPNDGAKGLNDQKNFFTYGGLGAF----------------------SGLGGGNGGLGGGGGLGGLGGGIGGLGG
        MAN+L +++ +AM M AFA  V AR APNDGAK ++DQKNF  YGG+G F                      SG+GGG GGLGGGGGLGGLGGGIGG GG
Subjt:  MANKLNVILVLAMSMAAFACHVAARAAPNDGAKGLNDQKNFFTYGGLGAF----------------------SGLGGGNGGLGGGGGLGGLGGGIGGLGG

Query:  GGGFNGLGGGIGGYGGGGS-GGIGGGVGGGVLGRIGGIG-GIGGGFVKIP
        GGG  GLGGGIGGYGGGG  GG+GGG+GG   G  GGIG G+GG FVKIP
Subjt:  GGGFNGLGGGIGGYGGGGS-GGIGGGVGGGVLGRIGGIG-GIGGGFVKIP

A0A6J1K6J1 glycine-rich protein 23-like9.2e-1554.17Show/hide
Query:  MANKLNVILVLAMSMAAFACHVAARAAPNDGAKGLNDQKNFFTYGGLGAFSGL---------------------------GGGNGGLGGGGGLGGLGGGI
        MAN+L +++ +AM M AFA  V AR APNDGAK ++DQKNF  YGG+G FSG+                           GGG GGLGGGGGLGGLGGGI
Subjt:  MANKLNVILVLAMSMAAFACHVAARAAPNDGAKGLNDQKNFFTYGGLGAFSGL---------------------------GGGNGGLGGGGGLGGLGGGI

Query:  GGLGGGGGFNGLGGGIGGYGGGGS-GGIGGGVG--------GGVLGRIGGIG------GIGGGFVKIP
        GG GGGGG  GLGGG GG GGGG  GG+GGG+G        GG+ G IGG G      G+GGGFVKIP
Subjt:  GGLGGGGGFNGLGGGIGGYGGGGS-GGIGGGVG--------GGVLGRIGGIG------GIGGGFVKIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAATAAGCTTAATGTGATTTTGGTCTTGGCTATGTCAATGGCTGCATTTGCATGCCATGTTGCTGCAAGAGCTGCCCCAAATGATGGGGCAAAAGGCCTCAATGA
CCAAAAGAACTTCTTCACCTATGGCGGCCTAGGTGCCTTCTCCGGGCTCGGCGGTGGCAATGGTGGGCTTGGAGGAGGCGGTGGCTTAGGCGGGCTCGGAGGTGGGATTG
GGGGACTCGGAGGGGGCGGTGGCTTCAATGGGCTTGGTGGTGGCATTGGTGGATACGGTGGGGGCGGTAGCGGTGGTATCGGAGGCGGTGTTGGGGGTGGCGTGCTCGGC
AGGATTGGTGGAATTGGAGGGATTGGTGGTGGTTTTGTTAAGATCCCTTGA
mRNA sequenceShow/hide mRNA sequence
AAATTAAAGAAAAAAAAGGGCCTTCAAAATGGCAAATAAGCTTAATGTGATTTTGGTCTTGGCTATGTCAATGGCTGCATTTGCATGCCATGTTGCTGCAAGAGCTGCCC
CAAATGATGGGGCAAAAGGCCTCAATGACCAAAAGAACTTCTTCACCTATGGCGGCCTAGGTGCCTTCTCCGGGCTCGGCGGTGGCAATGGTGGGCTTGGAGGAGGCGGT
GGCTTAGGCGGGCTCGGAGGTGGGATTGGGGGACTCGGAGGGGGCGGTGGCTTCAATGGGCTTGGTGGTGGCATTGGTGGATACGGTGGGGGCGGTAGCGGTGGTATCGG
AGGCGGTGTTGGGGGTGGCGTGCTCGGCAGGATTGGTGGAATTGGAGGGATTGGTGGTGGTTTTGTTAAGATCCCTTGAAGCAAATTTGGGAGGGTTTTGTGTTTGTTTT
GATATGTTTTATGTTGTTTTGATGTTATTTGCAATGTTTGGGTGTTTGTTTAAGGTTATGGGAAAAACTATGTAATGGGTGTGTGGGTGTTTGTTTTTCAATATTTTAGT
TACTAACTATCTTGTTGGTAAGGATGTATGAAAAGATTTTGCTTGCTATCCCTTTCTAATTTTAGGAAAATTTTCAAATA
Protein sequenceShow/hide protein sequence
MANKLNVILVLAMSMAAFACHVAARAAPNDGAKGLNDQKNFFTYGGLGAFSGLGGGNGGLGGGGGLGGLGGGIGGLGGGGGFNGLGGGIGGYGGGGSGGIGGGVGGGVLG
RIGGIGGIGGGFVKIP