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Sed0025002 (gene) of Chayote v1 genome

Gene IDSed0025002
OrganismSechium edule (Chayote v1)
Descriptionmitotic-spindle organizing protein 1B-like
Genome locationLG11:28349554..28352369
RNA-Seq ExpressionSed0025002
SyntenySed0025002
Gene Ontology termsGO:0033566 - gamma-tubulin complex localization (biological process)
GO:0051415 - microtubule nucleation by interphase microtubule organizing center (biological process)
GO:0090307 - mitotic spindle assembly (biological process)
GO:0000931 - gamma-tubulin large complex (cellular component)
GO:0005819 - spindle (cellular component)
GO:0031021 - interphase microtubule organizing center (cellular component)
InterPro domainsIPR022214 - Mitotic-spindle organizing protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598967.1 ALBINO3-like protein 3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]3.7e-2387.14Show/hide
Query:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPTSSETIVSNN
        MDPEAARTARESLDLAFH+ N+LDAGIDRHTLSVLIALCDMGVNPEALAAVVKEL R+ P SSETI+S N
Subjt:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPTSSETIVSNN

XP_011649034.1 mitotic-spindle organizing protein 1A [Cucumis sativus]2.2e-2388.57Show/hide
Query:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPTSSETIVSNN
        MD EAARTARESLDLAFH+SN+LDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRR+ P SS+TIVS+N
Subjt:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPTSSETIVSNN

XP_022932035.1 mitotic-spindle organizing protein 1B-like [Cucurbita moschata]8.2e-2387.14Show/hide
Query:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPTSSETIVSNN
        MDPEAARTARESLDLAFHISNIL+ GIDRHTLSVLIALCDMGVNPEALAAVVKELR++ P SSE I+S N
Subjt:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPTSSETIVSNN

XP_022973921.1 mitotic-spindle organizing protein 1B-like [Cucurbita maxima]2.2e-2388.57Show/hide
Query:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPTSSETIVSNN
        MDPEAARTARESLDLAFH+SN+LDAGIDRHTLSVLIALCDMGVNPEALAAVVKEL R+ P SSETI S N
Subjt:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPTSSETIVSNN

XP_038889535.1 mitotic-spindle organizing protein 1B [Benincasa hispida]1.5e-2490Show/hide
Query:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPTSSETIVSNN
        MDPEAARTARESLDLAFH+SN+LDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRR+ P SSET+VS+N
Subjt:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPTSSETIVSNN

TrEMBL top hitse value%identityAlignment
A0A0A0LMZ6 Uncharacterized protein1.0e-2388.57Show/hide
Query:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPTSSETIVSNN
        MD EAARTARESLDLAFH+SN+LDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRR+ P SS+TIVS+N
Subjt:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPTSSETIVSNN

A0A1S3B468 mitotic-spindle organizing protein 1A-like6.7e-2387.14Show/hide
Query:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPTSSETIVSNN
        MD EAARTARESLDLAFH+SN+LD+GIDRHTLSVLIALCDMGVNPEALAAVVKELRR+ P SSET VS+N
Subjt:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPTSSETIVSNN

A0A6J1F133 mitotic-spindle organizing protein 1B-like4.0e-2387.14Show/hide
Query:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPTSSETIVSNN
        MDPEAARTARESLDLAFHISNIL+ GIDRHTLSVLIALCDMGVNPEALAAVVKELR++ P SSE I+S N
Subjt:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPTSSETIVSNN

A0A6J1I8U7 mitotic-spindle organizing protein 1B-like1.0e-2388.57Show/hide
Query:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPTSSETIVSNN
        MDPEAARTARESLDLAFH+SN+LDAGIDRHTLSVLIALCDMGVNPEALAAVVKEL R+ P SSETI S N
Subjt:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPTSSETIVSNN

A0A6J1I9X9 mitotic-spindle organizing protein 1B-like4.0e-2387.14Show/hide
Query:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPTSSETIVSNN
        MDPEAARTARESLDLAFHISNIL+ GIDRHTLSVLIALCDMGVNPEALAAVVKELR++ P SSE I+S N
Subjt:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPTSSETIVSNN

SwissProt top hitse value%identityAlignment
A9NKD9 Mitotic-spindle organizing protein 11.1e-1776.27Show/hide
Query:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDS
        MD  AA+ ARESLDLAF ISN L  G+DRHTLS+LIALC+ GVNPEALAAVVKELRR++
Subjt:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDS

B5FXZ4 Mitotic-spindle organizing protein 11.8e-0954.17Show/hide
Query:  RESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRR
        RE++D+ F IS IL+ G+D  TLS+ + LC+ G+NPEAL++V+KELR+
Subjt:  RESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRR

Q5U4M5 Mitotic-spindle organizing protein 11.8e-0949.18Show/hide
Query:  RESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPT--SSETIVS
        RE++D+   IS +L+ G+D  TLS+ + LC+ G+NPEAL++V+KELRR S T  +SE+  S
Subjt:  RESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPT--SSETIVS

Q9C9T3 Mitotic-spindle organizing protein 1A6.7e-2071.21Show/hide
Query:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPTSSETI
        M+ EAA TARESL+L F +SNIL+ G+DRHTLSVLIALCD+G+NPEALA +VKELRRDS T++ T+
Subjt:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPTSSETI

Q9M0N8 Mitotic-spindle organizing protein 1B2.3e-2076.92Show/hide
Query:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPTSSET
        MD EA+RTARESL+L F +SNILD G+DRHTLSVLIALCD+GVNPEALA VVKELRR+S   S T
Subjt:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPTSSET

Arabidopsis top hitse value%identityAlignment
AT1G73790.1 Protein of unknown function (DUF3743)4.8e-2171.21Show/hide
Query:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPTSSETI
        M+ EAA TARESL+L F +SNIL+ G+DRHTLSVLIALCD+G+NPEALA +VKELRRDS T++ T+
Subjt:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPTSSETI

AT4G09550.1 AtGCP3 interacting protein 11.6e-2176.92Show/hide
Query:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPTSSET
        MD EA+RTARESL+L F +SNILD G+DRHTLSVLIALCD+GVNPEALA VVKELRR+S   S T
Subjt:  MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPTSSET


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCAGAGGCAGCACGAACAGCACGAGAATCACTAGATCTTGCATTTCACATCTCCAACATACTCGATGCTGGGATCGACCGCCACACCCTCTCTGTTCTTATTGC
TCTTTGTGACATGGGCGTGAACCCTGAAGCACTGGCTGCTGTTGTCAAGGAACTACGCCGAGACTCCCCAACCTCATCGGAGACCATCGTCTCCAATAACATGTAG
mRNA sequenceShow/hide mRNA sequence
CGTGATCTGTGACGGTAGAGTGAAAATAAATTAACACCAAATCCGATAACTAGTGCCACCGTTCTATGCCGTCCAAATGTATGAAACTTGATTTTACAAACTACAAGTTA
GGGTGGTTCTTGCAATTTTCAAAAAACACAAAAAACCCAAATCATATTCAAAACCTCAATTCGCCACAGCCCTAACCCCTTTCCCCTTCAATTCGCGTCAGAGCCCTCCA
TCTCCGCCCGTCTCCGGCCGCCGTACGTCTCAGCACTTCGCTTGGTTGACCTCTTTCTCCCTCAAAGATTCTCTACATGGATCCAGAGGCAGCACGAACAGCACGAGAAT
CACTAGATCTTGCATTTCACATCTCCAACATACTCGATGCTGGGATCGACCGCCACACCCTCTCTGTTCTTATTGCTCTTTGTGACATGGGCGTGAACCCTGAAGCACTG
GCTGCTGTTGTCAAGGAACTACGCCGAGACTCCCCAACCTCATCGGAGACCATCGTCTCCAATAACATGTAGTATGTGTTCGACAAGCAAAGAAATGACTCTGTTCTTCT
GATGGTTTCTTAACTTAAGTTCACATCTACTTTTTCTAAAACTACTTTTCTATTTAGAGCTTACTTGTATTTTGTTCATAGAGAGAGCTTTGTGTTCAGAACTGTTAAAA
AATACTCACTCCCTTGTGATTTGTGTTATGCACAAGAATACTACTCAGCTTTCTACAAGTATAGTTGGTTTTTGTTATGATGGGAGTTTATAGAATTAGGTGCATTTATT
AATTAGCATTCTAAACCAATATGGGTTGAGTTTTGGGTATCCAAAACCTTATGGGTGTGTTTGGGCCCCGTTTATGTAAACGGCCGAGTTGGTTATAATAACTCAACCGA
TGTTTGCCCCACCGTTTTATTATAAACGGTGGTTACCTAAACCTGCGTGCCA
Protein sequenceShow/hide protein sequence
MDPEAARTARESLDLAFHISNILDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRDSPTSSETIVSNNM