; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0025015 (gene) of Chayote v1 genome

Gene IDSed0025015
OrganismSechium edule (Chayote v1)
Description50S ribosomal protein L35
Genome locationLG08:3802680..3805855
RNA-Seq ExpressionSed0025015
SyntenySed0025015
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001706 - Ribosomal protein L35, non-mitochondrial
IPR018265 - Ribosomal protein L35, conserved site
IPR021137 - Ribosomal protein L35
IPR037229 - Ribosomal protein L35 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443834.1 PREDICTED: 50S ribosomal protein L35, chloroplastic [Cucumis melo]5.4e-5680.92Show/hide
Query:  MASASTALSFGLRFSPLCSRPSIRVSQTSVRLGPSKKPNSLRLGSSHSISGFGLAPFQKPCRIAAPGSQAPTPLTVFSAKGYKMKTHKASAKRFRVTGRG
        MASAS A+SFGLRFSPLCSRPS RVS TSV L    K NSL+L SSH+ISGFGL   QKP  I +P SQ  TP TVF+AKGYKMKTHKASAKRFRVTGRG
Subjt:  MASASTALSFGLRFSPLCSRPSIRVSQTSVRLGPSKKPNSLRLGSSHSISGFGLAPFQKPCRIAAPGSQAPTPLTVFSAKGYKMKTHKASAKRFRVTGRG

Query:  KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        KIVRRRAGKQHLLYKKN KR+LRLSK+HPVSRSDYDNVIGALPYLKVNRQA+
Subjt:  KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

XP_022135558.1 50S ribosomal protein L35, chloroplastic isoform X1 [Momordica charantia]4.9e-5784.31Show/hide
Query:  MASASTALSFGLRFSPLCSRPSIRVSQTSVRLGPS-KKPNSLRLGSSHSISGFGLAPFQKPCRIAAPGSQAPTPLTVFSAKGYKMKTHKASAKRFRVTGR
        MASAST +SFGLRFSPLCSRPS+RVS  SVRL  S  K NSLRLGSS +ISGFG+A  QK   I AP SQ  TPLTV +AKGYKMKTHKASAKRFRVTGR
Subjt:  MASASTALSFGLRFSPLCSRPSIRVSQTSVRLGPS-KKPNSLRLGSSHSISGFGLAPFQKPCRIAAPGSQAPTPLTVFSAKGYKMKTHKASAKRFRVTGR

Query:  GKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        GKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
Subjt:  GKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

XP_022933399.1 50S ribosomal protein L35, chloroplastic-like [Cucurbita moschata]3.2e-5680.92Show/hide
Query:  MASASTALSFGLRFSPLCSRPSIRVSQTSVRLGPSKKPNSLRLGSSHSISGFGLAPFQKPCRIAAPGSQAPTPLTVFSAKGYKMKTHKASAKRFRVTGRG
        MASASTA  FGLRF+PLCSRPS  VS +S+RL    K NSLRL SSH+ISG G+A  QK C+I AP  Q  TPLTV +AKGYKMKTHKASAKRFRVTGRG
Subjt:  MASASTALSFGLRFSPLCSRPSIRVSQTSVRLGPSKKPNSLRLGSSHSISGFGLAPFQKPCRIAAPGSQAPTPLTVFSAKGYKMKTHKASAKRFRVTGRG

Query:  KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQA+
Subjt:  KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

XP_022988597.1 50S ribosomal protein L35, chloroplastic-like [Cucurbita maxima]5.4e-5680.92Show/hide
Query:  MASASTALSFGLRFSPLCSRPSIRVSQTSVRLGPSKKPNSLRLGSSHSISGFGLAPFQKPCRIAAPGSQAPTPLTVFSAKGYKMKTHKASAKRFRVTGRG
        MASAS ++SFGLRFSPLCSR S+RVS+ SVRL  S K  SLRL SSH++S FG+A  QKP  I AP S+  TP TV +AKGYKMKTHKASAKRFRVTGRG
Subjt:  MASASTALSFGLRFSPLCSRPSIRVSQTSVRLGPSKKPNSLRLGSSHSISGFGLAPFQKPCRIAAPGSQAPTPLTVFSAKGYKMKTHKASAKRFRVTGRG

Query:  KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
Subjt:  KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

XP_023516182.1 50S ribosomal protein L35, chloroplastic-like [Cucurbita pepo subsp. pepo]4.9e-5782.24Show/hide
Query:  MASASTALSFGLRFSPLCSRPSIRVSQTSVRLGPSKKPNSLRLGSSHSISGFGLAPFQKPCRIAAPGSQAPTPLTVFSAKGYKMKTHKASAKRFRVTGRG
        MASAS   SFGLRFSPLCSR S+RVS++SVRL  S K  SLRL SSH+IS FG+A  QKPC I AP S+  TP TV +AKGYKMKTHKASAKRFRVTGRG
Subjt:  MASASTALSFGLRFSPLCSRPSIRVSQTSVRLGPSKKPNSLRLGSSHSISGFGLAPFQKPCRIAAPGSQAPTPLTVFSAKGYKMKTHKASAKRFRVTGRG

Query:  KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
Subjt:  KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

TrEMBL top hitse value%identityAlignment
A0A0A0LYX0 50S ribosomal protein L352.9e-5579.61Show/hide
Query:  MASASTALSFGLRFSPLCSRPSIRVSQTSVRLGPSKKPNSLRLGSSHSISGFGLAPFQKPCRIAAPGSQAPTPLTVFSAKGYKMKTHKASAKRFRVTGRG
        MASAS A+SFGLRFSPLCSRPS RVS TSV +    K NSL+L SSH+ISGFG    QKP  I +P SQ  TP TVF+AKGYKMKTHKASAKRFRVTGRG
Subjt:  MASASTALSFGLRFSPLCSRPSIRVSQTSVRLGPSKKPNSLRLGSSHSISGFGLAPFQKPCRIAAPGSQAPTPLTVFSAKGYKMKTHKASAKRFRVTGRG

Query:  KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        KIVRRRAGKQHLL KKN KR+LRLSKMHPVSRSDYDNVIGALPYLKVNRQA+
Subjt:  KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

A0A1S3B9R8 50S ribosomal protein L352.6e-5680.92Show/hide
Query:  MASASTALSFGLRFSPLCSRPSIRVSQTSVRLGPSKKPNSLRLGSSHSISGFGLAPFQKPCRIAAPGSQAPTPLTVFSAKGYKMKTHKASAKRFRVTGRG
        MASAS A+SFGLRFSPLCSRPS RVS TSV L    K NSL+L SSH+ISGFGL   QKP  I +P SQ  TP TVF+AKGYKMKTHKASAKRFRVTGRG
Subjt:  MASASTALSFGLRFSPLCSRPSIRVSQTSVRLGPSKKPNSLRLGSSHSISGFGLAPFQKPCRIAAPGSQAPTPLTVFSAKGYKMKTHKASAKRFRVTGRG

Query:  KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        KIVRRRAGKQHLLYKKN KR+LRLSK+HPVSRSDYDNVIGALPYLKVNRQA+
Subjt:  KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

A0A6J1C550 50S ribosomal protein L352.4e-5784.31Show/hide
Query:  MASASTALSFGLRFSPLCSRPSIRVSQTSVRLGPS-KKPNSLRLGSSHSISGFGLAPFQKPCRIAAPGSQAPTPLTVFSAKGYKMKTHKASAKRFRVTGR
        MASAST +SFGLRFSPLCSRPS+RVS  SVRL  S  K NSLRLGSS +ISGFG+A  QK   I AP SQ  TPLTV +AKGYKMKTHKASAKRFRVTGR
Subjt:  MASASTALSFGLRFSPLCSRPSIRVSQTSVRLGPS-KKPNSLRLGSSHSISGFGLAPFQKPCRIAAPGSQAPTPLTVFSAKGYKMKTHKASAKRFRVTGR

Query:  GKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        GKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
Subjt:  GKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

A0A6J1EZN8 50S ribosomal protein L351.5e-5680.92Show/hide
Query:  MASASTALSFGLRFSPLCSRPSIRVSQTSVRLGPSKKPNSLRLGSSHSISGFGLAPFQKPCRIAAPGSQAPTPLTVFSAKGYKMKTHKASAKRFRVTGRG
        MASASTA  FGLRF+PLCSRPS  VS +S+RL    K NSLRL SSH+ISG G+A  QK C+I AP  Q  TPLTV +AKGYKMKTHKASAKRFRVTGRG
Subjt:  MASASTALSFGLRFSPLCSRPSIRVSQTSVRLGPSKKPNSLRLGSSHSISGFGLAPFQKPCRIAAPGSQAPTPLTVFSAKGYKMKTHKASAKRFRVTGRG

Query:  KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQA+
Subjt:  KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

A0A6J1JDG6 50S ribosomal protein L352.6e-5680.92Show/hide
Query:  MASASTALSFGLRFSPLCSRPSIRVSQTSVRLGPSKKPNSLRLGSSHSISGFGLAPFQKPCRIAAPGSQAPTPLTVFSAKGYKMKTHKASAKRFRVTGRG
        MASAS ++SFGLRFSPLCSR S+RVS+ SVRL  S K  SLRL SSH++S FG+A  QKP  I AP S+  TP TV +AKGYKMKTHKASAKRFRVTGRG
Subjt:  MASASTALSFGLRFSPLCSRPSIRVSQTSVRLGPSKKPNSLRLGSSHSISGFGLAPFQKPCRIAAPGSQAPTPLTVFSAKGYKMKTHKASAKRFRVTGRG

Query:  KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
Subjt:  KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

SwissProt top hitse value%identityAlignment
B2J0D1 50S ribosomal protein L355.1e-0957.14Show/hide
Query:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYL
        K+KT KA+AKRFR TG GKIVRR+AGK HLL  K++ +K  +SK   V   D  NV   LPYL
Subjt:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYL

P23326 50S ribosomal protein L35, chloroplastic2.5e-3259.24Show/hide
Query:  MASASTALSF---GLRFSPLCSRPSIRVSQTSVRLGPSKKPNSLRLGSSHSISGFGLAPF-QKPCRIAAPGSQAPT---PLTVFSAKGYKMKTHKASAKR
        MASA+  LSF    L  SP  +R S     +        K ++L L SS SIS   + P   K  RI+   S   T     TVF+AKGYKMKTHKASAKR
Subjt:  MASASTALSF---GLRFSPLCSRPSIRVSQTSVRLGPSKKPNSLRLGSSHSISGFGLAPF-QKPCRIAAPGSQAPT---PLTVFSAKGYKMKTHKASAKR

Query:  FRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQ
        FRVTG+GKIVRRRAGKQHLL KKNTKRK RLSK+  V RSDYDNVIGALPYLKVNR+
Subjt:  FRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQ

Q3M7I2 50S ribosomal protein L354.6e-1058.73Show/hide
Query:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYL
        K+KT KA+AKRFR TG GKIVRR+A K HLL  K T +K + SKM  V+  D +NV   LPYL
Subjt:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYL

Q8VZ55 50S ribosomal protein L35, chloroplastic1.2e-3474.31Show/hide
Query:  LGSSHSISGFGLAPFQKPCRIAAPGSQAPTPLTVFSAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGAL
        L SSHSISG       K   +A+P SQ     TVF+ KGYKMKTHKASAKRFRVTGRGKIVRRR+GKQHLL KKN KRKLRLSKM  V+RSDYDNVIGAL
Subjt:  LGSSHSISGFGLAPFQKPCRIAAPGSQAPTPLTVFSAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGAL

Query:  PYLKVNRQA
        PYLKVNR+A
Subjt:  PYLKVNRQA

Q8YRL9 50S ribosomal protein L354.6e-1058.73Show/hide
Query:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYL
        K+KT KA+AKRFR TG GKIVRR+A K HLL  K T +K + SKM  V+  D +NV   LPYL
Subjt:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYL

Arabidopsis top hitse value%identityAlignment
AT2G24090.1 Ribosomal protein L358.6e-3674.31Show/hide
Query:  LGSSHSISGFGLAPFQKPCRIAAPGSQAPTPLTVFSAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGAL
        L SSHSISG       K   +A+P SQ     TVF+ KGYKMKTHKASAKRFRVTGRGKIVRRR+GKQHLL KKN KRKLRLSKM  V+RSDYDNVIGAL
Subjt:  LGSSHSISGFGLAPFQKPCRIAAPGSQAPTPLTVFSAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGAL

Query:  PYLKVNRQA
        PYLKVNR+A
Subjt:  PYLKVNRQA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTGCTTCGACGGCACTGTCGTTCGGCCTTAGGTTTTCCCCACTCTGCTCTCGCCCGTCAATTCGCGTCTCTCAAACTTCCGTCCGGCTCGGTCCGTCCAAAAA
GCCGAACTCGTTGCGGCTCGGTTCATCCCACAGCATTTCCGGGTTCGGACTCGCTCCATTTCAGAAGCCATGTCGCATTGCCGCTCCCGGCTCGCAAGCTCCCACTCCTC
TCACTGTTTTCTCTGCCAAAGGCTACAAGATGAAAACCCATAAGGCTTCGGCTAAGCGATTCAGGGTGACGGGACGAGGGAAAATTGTTAGGAGGAGAGCAGGAAAGCAG
CATTTGCTGTACAAGAAGAACACCAAGAGGAAATTGCGCCTTTCCAAAATGCACCCAGTGAGCCGGAGTGACTACGATAATGTGATTGGTGCGTTGCCATATCTGAAGGT
GAATAGGCAGGCAAAGTAG
mRNA sequenceShow/hide mRNA sequence
AAAATAATAAACATAAAAGAAAAAAAGCGCTGCCTTTTATCCACTCTAAAGAAGAAGAAAAACCAGACGCTTCGAAGCTTCAGTAATGGCGTCTGCTTCGACGGCACTGT
CGTTCGGCCTTAGGTTTTCCCCACTCTGCTCTCGCCCGTCAATTCGCGTCTCTCAAACTTCCGTCCGGCTCGGTCCGTCCAAAAAGCCGAACTCGTTGCGGCTCGGTTCA
TCCCACAGCATTTCCGGGTTCGGACTCGCTCCATTTCAGAAGCCATGTCGCATTGCCGCTCCCGGCTCGCAAGCTCCCACTCCTCTCACTGTTTTCTCTGCCAAAGGCTA
CAAGATGAAAACCCATAAGGCTTCGGCTAAGCGATTCAGGGTGACGGGACGAGGGAAAATTGTTAGGAGGAGAGCAGGAAAGCAGCATTTGCTGTACAAGAAGAACACCA
AGAGGAAATTGCGCCTTTCCAAAATGCACCCAGTGAGCCGGAGTGACTACGATAATGTGATTGGTGCGTTGCCATATCTGAAGGTGAATAGGCAGGCAAAGTAGAGGCCA
TTGCCCCCACTCCACTACATCCTCTGTTGTAACCAAATGATTTCAATTTTCCACAACTCATTAAAGGGCAAAGTTTGATTGCTTAAAAATGTTATTTGTCTAATGTATTT
CATCAGTTGATAATGTTCCCTTCTTTTAGTTATCTTCCTTTCCTTTTGCTAACCTGGCAGGCTACAAAAGGGAACTTATTTCCTCAAAACAAAAGGCGTACAGATTCGAT
AATGAATAAATCCCCTATGTAGGATTATTGCTCCCAATTTGTATTAAAAAATAAAATAAAAAAGGCAACTACAAGTTTACTCTGGAACTCAATTTTGATAAGTTGAGATT
TTTTTTTTGAATGGGTCAAA
Protein sequenceShow/hide protein sequence
MASASTALSFGLRFSPLCSRPSIRVSQTSVRLGPSKKPNSLRLGSSHSISGFGLAPFQKPCRIAAPGSQAPTPLTVFSAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQ
HLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK