CuGenDBv2

Gene ID	Sed0025029
Organism	Sechium edule (Chayote v1)
Description	Adp-ribosylation factor
Genome location	LG14:17597933..17599115
RNA-Seq Expression	Sed0025029
Synteny	Sed0025029
Gene Ontology terms	GO:0006886 - intracellular protein transport (biological process) GO:0016192 - vesicle-mediated transport (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function)
InterPro domains	IPR006689 - Small GTPase superfamily, ARF/SAR type IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

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GenBank top hits

e value

%identity

Alignment

EOX91542.1 ADP-ribosylation factor A1F isoform 1 [Theobroma cacao]

3.2e-16

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Query:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV------------------LMWRLLNTRMLALQCGMLEARTRYSL
        MG  ISRLVRMLFAK+EMRILMVGLDA+GKTTILYK+KLGEIV+TIPTIG ++E V                  L  +LL T+MLA   GMLE +  +++
Subjt:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV------------------LMWRLLNTRMLALQCGMLEARTRYSL

PIA56615.1 hypothetical protein AQUCO_00700754v1 [Aquilegia coerulea]

1.6e-15

85.71

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Query:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV
        MG AISRLVRMLFAKREMRILMVGLDA+GKTTILYK+KLGEIV+TIPTIG ++E V
Subjt:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV

PIA56617.1 hypothetical protein AQUCO_00700754v1 [Aquilegia coerulea]

1.6e-15

85.71

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Query:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV
        MG AISRLVRMLFAKREMRILMVGLDA+GKTTILYK+KLGEIV+TIPTIG ++E V
Subjt:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV

XP_026445988.1 ADP-ribosylation factor 1-like isoform X2 [Papaver somniferum]

1.6e-15

85.71

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Query:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV
        MG AISRLVRMLFAKREMRILMVGLDA+GKTTILYK+KLGEIV+TIPTIG ++E V
Subjt:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV

XP_042507484.1 ADP-ribosylation factor 1-like [Macadamia integrifolia]

1.2e-15

83.93

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Query:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV
        MG+AISRLVRMLFAKREMR+LMVGLDA+GKTTILYK+KLGEIV+TIPTIG ++E V
Subjt:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV

TrEMBL top hits

e value

%identity

Alignment

A0A061DH91 ADP-ribosylation factor A1F isoform 1

1.5e-16

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Query:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV------------------LMWRLLNTRMLALQCGMLEARTRYSL
        MG  ISRLVRMLFAK+EMRILMVGLDA+GKTTILYK+KLGEIV+TIPTIG ++E V                  L  +LL T+MLA   GMLE +  +++
Subjt:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV------------------LMWRLLNTRMLALQCGMLEARTRYSL

A0A2G5ELI5 Uncharacterized protein

7.7e-16

85.71

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Query:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV
        MG AISRLVRMLFAKREMRILMVGLDA+GKTTILYK+KLGEIV+TIPTIG ++E V
Subjt:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV

A0A2G5EM19 Uncharacterized protein

7.7e-16

85.71

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Query:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV
        MG AISRLVRMLFAKREMRILMVGLDA+GKTTILYK+KLGEIV+TIPTIG ++E V
Subjt:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV

A0A6J1KPF3 ADP-ribosylation factor 1-like

7.7e-16

85.71

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Query:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV
        MG AISRLVRMLFAK+EMRILMVGLDASGKTTILYK+KLGEIV+TIPTIG ++E V
Subjt:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV

A0A7J6X5B9 Adp-ribosylation factor

7.7e-16

85.71

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Query:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV
        MG AISRLVRMLFAKREMRILMVGLDA+GKTTILYK+KLGEIV+TIPTIG ++E V
Subjt:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV

SwissProt top hits

e value

%identity

Alignment

P0CM16 ADP-ribosylation factor

6.3e-15

71.43

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Query:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV
        MG ++S+L+  LF K+EMRILMVGLDA+GKTTILYK+KLGEIV+TIPTIG ++E V
Subjt:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV

P0CM17 ADP-ribosylation factor

6.3e-15

71.43

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Query:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV
        MG ++S+L+  LF K+EMRILMVGLDA+GKTTILYK+KLGEIV+TIPTIG ++E V
Subjt:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV

P36579 ADP-ribosylation factor 1

1.6e-15

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Query:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV
        MG +IS+L + LF KREMRILMVGLDA+GKTTILYK+KLGEIV+TIPTIG ++E V
Subjt:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV

P51822 ADP-ribosylation factor 1

1.4e-14

71.43

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Query:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV
        MG + ++L   LFAK+EMRILMVGLDA+GKTTILYK+KLGEIV+TIPTIG ++E V
Subjt:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV

P51824 ADP-ribosylation factor 1

2.8e-15

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Query:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV
        MG  IS+L   LFAK+EMRILMVGLDA+GKTTILYK+KLGEIV+TIPTIG ++E V
Subjt:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV

Arabidopsis top hits

e value

%identity

Alignment

AT1G10630.1 ADP-ribosylation factor A1F

9.9e-16

71.43

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Query:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV
        MG + ++L   LFAK+EMRILMVGLDA+GKTTILYK+KLGEIV+TIPTIG ++E V
Subjt:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV

AT1G23490.1 ADP-ribosylation factor 1

9.9e-16

71.43

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Query:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV
        MG + ++L   LFAK+EMRILMVGLDA+GKTTILYK+KLGEIV+TIPTIG ++E V
Subjt:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV

AT1G70490.1 Ras-related small GTP-binding family protein

9.9e-16

71.43

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Query:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV
        MG + ++L   LFAK+EMRILMVGLDA+GKTTILYK+KLGEIV+TIPTIG ++E V
Subjt:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV

AT1G70490.2 Ras-related small GTP-binding family protein

9.9e-16

71.43

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Query:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV
        MG + ++L   LFAK+EMRILMVGLDA+GKTTILYK+KLGEIV+TIPTIG ++E V
Subjt:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV

AT1G70490.3 Ras-related small GTP-binding family protein

9.9e-16

71.43

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Query:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV
        MG + ++L   LFAK+EMRILMVGLDA+GKTTILYK+KLGEIV+TIPTIG ++E V
Subjt:  MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMV

Sequences

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CDS sequence

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mRNA sequence

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ATGGGAGCGGCCATATCTCGGCTTGTGAGGATGCTGTTTGCAAAGAGAGAAATGAGGATTTTAATGGTGGGTCTTGATGCTTCTGGAAAAACAACCATTCTGTATAAAAT
GAAGCTTGGAGAGATTGTCAGCACCATACCCACCATTGGCACGCACATTGAGATGGTTTTAATGTGGAGACTGTTGAATACAAGAATGTTAGCTTTACAGTGTGGGATGT
TGGAGGCCAGGACAAGGTATTCTCTTAGCTTCCATTTGATAACTATTTGATTTTTTGTTTTTTGTTTTTGAAATTTAAAATTATTTTCACTCAAATTTCTTACAACTGTG
TTCCATTTTCCCTATCATCTATCGATCTTTCCTTAATAAAATATGTGAATGCTAACCAAACTTCAAAAATAAAAACAAACTTTTGGAA

Protein sequence

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MGAAISRLVRMLFAKREMRILMVGLDASGKTTILYKMKLGEIVSTIPTIGTHIEMVLMWRLLNTRMLALQCGMLEARTRYSLSFHLITI

Sed0025029 (gene) of Chayote v1 genome